RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 GRAMD4Q6IC98 578 aa20.84■□□□□ 0.93
SHROOM1-204ENST00000440118 ALLCQ8N6M5 410 aa20.84■□□□□ 0.93
SHROOM1-204ENST00000440118 UBA3Q8TBC4 463 aa20.84■□□□□ 0.93
SHROOM1-204ENST00000440118 BHMTQ93088 406 aa20.84■□□□□ 0.93
SHROOM1-204ENST00000440118 RMDN1Q96DB5 314 aa20.84■□□□□ 0.93
SHROOM1-204ENST00000440118 ULBP1Q9BZM6 244 aa20.84■□□□□ 0.93
SHROOM1-204ENST00000440118 KIAA1468Q9P260 1216 aa20.84■□□□□ 0.93
SHROOM1-204ENST00000440118 BCCIPQ9P287 314 aaKnown RBP eCLIP20.84■□□□□ 0.93
SHROOM1-204ENST00000440118 WDR35Q9P2L0 1181 aa20.84■□□□□ 0.93
SHROOM1-204ENST00000440118 CDV3Q9UKY7 258 aaKnown RBP20.84■□□□□ 0.93
SHROOM1-204ENST00000440118 M0QYV0 167 aa20.83■□□□□ 0.93
SHROOM1-204ENST00000440118 PMM2O15305 246 aa20.83■□□□□ 0.93
SHROOM1-204ENST00000440118 LRP3O75074 770 aa20.83■□□□□ 0.93
SHROOM1-204ENST00000440118 PAEPP09466 180 aa20.83■□□□□ 0.93
SHROOM1-204ENST00000440118 TYRP14679 529 aa20.83■□□□□ 0.93
SHROOM1-204ENST00000440118 GBP1P32455 592 aa20.83■□□□□ 0.93
SHROOM1-204ENST00000440118 COG7P83436 770 aa20.83■□□□□ 0.93
SHROOM1-204ENST00000440118 ELF2Q15723 593 aa20.83■□□□□ 0.93
SHROOM1-204ENST00000440118 TPD52L1Q16890 204 aaPredicted RBP20.83■□□□□ 0.93
SHROOM1-204ENST00000440118 RSPO4Q2I0M5 234 aaPredicted RBP20.83■□□□□ 0.93
SHROOM1-204ENST00000440118 HSF5Q4G112 596 aaPredicted RBP20.83■□□□□ 0.93
SHROOM1-204ENST00000440118 EOGTQ5NDL2 527 aa20.83■□□□□ 0.93
SHROOM1-204ENST00000440118 RRAGAQ7L523 313 aa20.83■□□□□ 0.93
SHROOM1-204ENST00000440118 TRMT11Q7Z4G4 463 aaKnown RBP20.83■□□□□ 0.93
SHROOM1-204ENST00000440118 SFTPA1Q8IWL2 248 aa20.83■□□□□ 0.93
SHROOM1-204ENST00000440118 TRIM59Q8IWR1 403 aa20.83■□□□□ 0.93
SHROOM1-204ENST00000440118 TXNDC5Q8NBS9 432 aaKnown RBP20.83■□□□□ 0.93
SHROOM1-204ENST00000440118 RNF139Q8WU17 664 aa20.83■□□□□ 0.93
SHROOM1-204ENST00000440118 MARCH2Q9P0N8 246 aa20.83■□□□□ 0.93
SHROOM1-204ENST00000440118 ZNF510Q9Y2H8 683 aa20.83■□□□□ 0.93
SHROOM1-204ENST00000440118 DCHS1Q96JQ0 3298 aa20.82■□□□□ 0.92
SHROOM1-204ENST00000440118 PRR5-ARHGAP8B1AHC4 643 aa20.82■□□□□ 0.92
SHROOM1-204ENST00000440118 O00370 1275 aa20.82■□□□□ 0.92
SHROOM1-204ENST00000440118 STC2O76061 302 aa20.82■□□□□ 0.92
SHROOM1-204ENST00000440118 KRT5P13647 590 aa20.82■□□□□ 0.92
SHROOM1-204ENST00000440118 SDHBP21912 280 aa20.82■□□□□ 0.92
SHROOM1-204ENST00000440118 TNFRSF4P43489 277 aa20.82■□□□□ 0.92
SHROOM1-204ENST00000440118 ARHGAP8P85298 464 aa20.82■□□□□ 0.92
SHROOM1-204ENST00000440118 MESP2Q0VG99 397 aa20.82■□□□□ 0.92
SHROOM1-204ENST00000440118 RAB41Q5JT25 222 aa20.82■□□□□ 0.92
SHROOM1-204ENST00000440118 DGLUCYQ7Z3D6 616 aa20.82■□□□□ 0.92
SHROOM1-204ENST00000440118 KBTBD6Q86V97 674 aa20.82■□□□□ 0.92
SHROOM1-204ENST00000440118 ETFBKMTQ8IXQ9 262 aa20.82■□□□□ 0.92
SHROOM1-204ENST00000440118 ZNF513Q8N8E2 541 aaPredicted RBP20.82■□□□□ 0.92
SHROOM1-204ENST00000440118 TERB1Q8NA31 727 aa20.82■□□□□ 0.92
SHROOM1-204ENST00000440118 RBBP8NLQ8NC74 664 aaPredicted RBP20.82■□□□□ 0.92
SHROOM1-204ENST00000440118 TPSD1Q9BZJ3 242 aa20.82■□□□□ 0.92
SHROOM1-204ENST00000440118 DCLK3Q9C098 648 aa20.82■□□□□ 0.92
SHROOM1-204ENST00000440118 INTS2Q9H0H0 1204 aaKnown RBP20.82■□□□□ 0.92
SHROOM1-204ENST00000440118 POLMQ9NP87 494 aaPredicted RBP20.82■□□□□ 0.92
SHROOM1-204ENST00000440118 PARD6AQ9NPB6 346 aa20.82■□□□□ 0.92
SHROOM1-204ENST00000440118 ZDHHC4Q9NPG8 344 aa20.82■□□□□ 0.92
SHROOM1-204ENST00000440118 SEMA4GQ9NTN9 838 aa20.82■□□□□ 0.92
SHROOM1-204ENST00000440118 EBF1Q9UH73 591 aa20.82■□□□□ 0.92
SHROOM1-204ENST00000440118 RWDD2AQ9UIY3 292 aa20.82■□□□□ 0.92
SHROOM1-204ENST00000440118 SLC12A8A0AV02 714 aa20.81■□□□□ 0.92
SHROOM1-204ENST00000440118 TULP2O00295 520 aa20.81■□□□□ 0.92
SHROOM1-204ENST00000440118 LCP1P13796 627 aa20.81■□□□□ 0.92
SHROOM1-204ENST00000440118 BRD2P25440 801 aaKnown RBP20.81■□□□□ 0.92
SHROOM1-204ENST00000440118 CORO1AP31146 461 aaKnown RBP20.81■□□□□ 0.92
SHROOM1-204ENST00000440118 PUM1Q14671 1186 aaKnown RBP eCLIP20.81■□□□□ 0.92
SHROOM1-204ENST00000440118 STILQ15468 1287 aa20.81■□□□□ 0.92
SHROOM1-204ENST00000440118 CRY1Q16526 586 aa20.81■□□□□ 0.92
SHROOM1-204ENST00000440118 USP39Q53GS9 565 aaKnown RBP20.81■□□□□ 0.92
SHROOM1-204ENST00000440118 PGBD3Q8N328 593 aa20.81■□□□□ 0.92
SHROOM1-204ENST00000440118 ZNF276Q8N554 614 aa20.81■□□□□ 0.92
SHROOM1-204ENST00000440118 UBR7Q8N806 425 aa20.81■□□□□ 0.92
SHROOM1-204ENST00000440118 IL17RCQ8NAC3 791 aa20.81■□□□□ 0.92
SHROOM1-204ENST00000440118 GOLGA1Q92805 767 aa20.81■□□□□ 0.92
SHROOM1-204ENST00000440118 KAT5Q92993 513 aa20.81■□□□□ 0.92
SHROOM1-204ENST00000440118 CNOT6LQ96LI5 555 aaKnown RBP20.81■□□□□ 0.92
SHROOM1-204ENST00000440118 OLA1Q9NTK5 396 aaKnown RBP20.81■□□□□ 0.92
SHROOM1-204ENST00000440118 THADAQ6YHU6 1953 aa20.81■□□□□ 0.92
SHROOM1-204ENST00000440118 ZBTB24O43167 697 aaPredicted RBP20.8■□□□□ 0.92
SHROOM1-204ENST00000440118 CACNG3O60359 315 aa20.8■□□□□ 0.92
SHROOM1-204ENST00000440118 RGS7P49802 495 aa20.8■□□□□ 0.92
SHROOM1-204ENST00000440118 MARSP56192 900 aaKnown RBP20.8■□□□□ 0.92
SHROOM1-204ENST00000440118 GCNT1Q02742 428 aa20.8■□□□□ 0.92
SHROOM1-204ENST00000440118 LCLAT1Q6UWP7 414 aa20.8■□□□□ 0.92
SHROOM1-204ENST00000440118 ERMP1Q7Z2K6 904 aa20.8■□□□□ 0.92
SHROOM1-204ENST00000440118 ARHGEF19Q8IW93 802 aa20.8■□□□□ 0.92
SHROOM1-204ENST00000440118 C12orf50Q8NA57 414 aaPredicted RBP20.8■□□□□ 0.92
SHROOM1-204ENST00000440118 EHBP1Q8NDI1 1231 aa20.8■□□□□ 0.92
SHROOM1-204ENST00000440118 NDRG1Q92597 394 aaKnown RBP20.8■□□□□ 0.92
SHROOM1-204ENST00000440118 LOXL4Q96JB6 756 aa20.8■□□□□ 0.92
SHROOM1-204ENST00000440118 MARK1Q9P0L2 795 aa20.8■□□□□ 0.92
SHROOM1-204ENST00000440118 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.8■□□□□ 0.92
SHROOM1-204ENST00000440118 ANTXRLA6NF34 631 aa20.79■□□□□ 0.92
SHROOM1-204ENST00000440118 SGK1O00141 431 aa20.79■□□□□ 0.92
SHROOM1-204ENST00000440118 FOXD2O60548 495 aaPredicted RBP20.79■□□□□ 0.92
SHROOM1-204ENST00000440118 GREM1O60565 184 aa20.79■□□□□ 0.92
SHROOM1-204ENST00000440118 RHOBTB1O94844 696 aa20.79■□□□□ 0.92
SHROOM1-204ENST00000440118 CYBBP04839 570 aa20.79■□□□□ 0.92
SHROOM1-204ENST00000440118 CHKAP35790 457 aa20.79■□□□□ 0.92
SHROOM1-204ENST00000440118 DGKGP49619 791 aa20.79■□□□□ 0.92
SHROOM1-204ENST00000440118 FOXK2Q01167 660 aa20.79■□□□□ 0.92
SHROOM1-204ENST00000440118 CSRP2Q16527 193 aa20.79■□□□□ 0.92
SHROOM1-204ENST00000440118 EMC10Q5UCC4 262 aa20.79■□□□□ 0.92
SHROOM1-204ENST00000440118 SDE2Q6IQ49 451 aa20.79■□□□□ 0.92
SHROOM1-204ENST00000440118 Q6ZNB5 142 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms