RNA–Protein interactions for RNA: ENST00000435455.5

SMPD4-207, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-207ENST00000435455 RAPGEF1Q13905 1077 aa17.03■□□□□ 0.32
SMPD4-207ENST00000435455 FBXO43Q4G163 708 aa17.03■□□□□ 0.32
SMPD4-207ENST00000435455 ANO6Q4KMQ2 910 aa17.03■□□□□ 0.32
SMPD4-207ENST00000435455 LY6G5CQ5SRR4 150 aa17.03■□□□□ 0.32
SMPD4-207ENST00000435455 BSPRYQ5W0U4 402 aa17.03■□□□□ 0.32
SMPD4-207ENST00000435455 DENND1BQ6P3S1 775 aa17.03■□□□□ 0.32
SMPD4-207ENST00000435455 FAM71AQ8IYT1 594 aa17.03■□□□□ 0.32
SMPD4-207ENST00000435455 MAML2Q8IZL2 1156 aaPredicted RBP17.03■□□□□ 0.32
SMPD4-207ENST00000435455 AOPEPQ8N6M6 819 aa17.03■□□□□ 0.32
SMPD4-207ENST00000435455 CCDC26Q8TAB7 109 aa17.03■□□□□ 0.32
SMPD4-207ENST00000435455 NDRG1Q92597 394 aaKnown RBP17.03■□□□□ 0.32
SMPD4-207ENST00000435455 GOLGA1Q92805 767 aa17.03■□□□□ 0.32
SMPD4-207ENST00000435455 BPIFA3Q9BQP9 254 aa17.03■□□□□ 0.32
SMPD4-207ENST00000435455 PRMT8Q9NR22 394 aaPredicted RBP17.03■□□□□ 0.32
SMPD4-207ENST00000435455 SPHK2Q9NRA0 654 aa17.03■□□□□ 0.32
SMPD4-207ENST00000435455 ST7Q9NRC1 585 aa17.03■□□□□ 0.32
SMPD4-207ENST00000435455 PCDHGC3Q9UN70 934 aa17.03■□□□□ 0.32
SMPD4-207ENST00000435455 ZFHX2Q9C0A1 2572 aaPredicted RBP17.03■□□□□ 0.32
SMPD4-207ENST00000435455 VPS13AQ96RL7 3174 aa17.02■□□□□ 0.32
SMPD4-207ENST00000435455 SMTNL1A8MU46 457 aa17.02■□□□□ 0.32
SMPD4-207ENST00000435455 HOXC11O43248 304 aaPredicted RBP17.02■□□□□ 0.32
SMPD4-207ENST00000435455 GREM1O60565 184 aa17.02■□□□□ 0.32
SMPD4-207ENST00000435455 GABBR2O75899 941 aa17.02■□□□□ 0.32
SMPD4-207ENST00000435455 LTFP02788 710 aa17.02■□□□□ 0.32
SMPD4-207ENST00000435455 UCHL3P15374 230 aa17.02■□□□□ 0.32
SMPD4-207ENST00000435455 ZNF18P17022 549 aa17.02■□□□□ 0.32
SMPD4-207ENST00000435455 CLCN1P35523 988 aa17.02■□□□□ 0.32
SMPD4-207ENST00000435455 OPRD1P41143 372 aa17.02■□□□□ 0.32
SMPD4-207ENST00000435455 CXCL12P48061 93 aa17.02■□□□□ 0.32
SMPD4-207ENST00000435455 COPB1P53618 953 aaKnown RBP17.02■□□□□ 0.32
SMPD4-207ENST00000435455 GAD2Q05329 585 aa17.02■□□□□ 0.32
SMPD4-207ENST00000435455 DRAP1Q14919 205 aaPredicted RBP17.02■□□□□ 0.32
SMPD4-207ENST00000435455 NCAPHQ15003 741 aa17.02■□□□□ 0.32
SMPD4-207ENST00000435455 GAB4Q2WGN9 574 aa17.02■□□□□ 0.32
SMPD4-207ENST00000435455 NAIF1Q69YI7 327 aaPredicted RBP17.02■□□□□ 0.32
SMPD4-207ENST00000435455 ZC3H14Q6PJT7 736 aaKnown RBP17.02■□□□□ 0.32
SMPD4-207ENST00000435455 Q6ZNB5 142 aa17.02■□□□□ 0.32
SMPD4-207ENST00000435455 Q6ZS52 159 aa17.02■□□□□ 0.32
SMPD4-207ENST00000435455 FAM126AQ9BYI3 521 aaPredicted RBP17.02■□□□□ 0.32
SMPD4-207ENST00000435455 FBRSL1Q9HCM7 1045 aaKnown RBP17.02■□□□□ 0.32
SMPD4-207ENST00000435455 ACP6Q9NPH0 428 aa17.02■□□□□ 0.32
SMPD4-207ENST00000435455 DAAM1Q9Y4D1 1078 aa17.02■□□□□ 0.32
SMPD4-207ENST00000435455 FHOD1Q9Y613 1164 aa17.02■□□□□ 0.32
SMPD4-207ENST00000435455 WDR87Q6ZQQ6 2873 aa17.01■□□□□ 0.31
SMPD4-207ENST00000435455 SLC12A8A0AV02 714 aa17.01■□□□□ 0.31
SMPD4-207ENST00000435455 LRRC10BA6NIK2 292 aa17.01■□□□□ 0.31
SMPD4-207ENST00000435455 LGALS16A8MUM7 142 aa17.01■□□□□ 0.31
SMPD4-207ENST00000435455 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.01■□□□□ 0.31
SMPD4-207ENST00000435455 PROB1E7EW31 1015 aa17.01■□□□□ 0.31
SMPD4-207ENST00000435455 PIK3R2O00459 728 aa17.01■□□□□ 0.31
SMPD4-207ENST00000435455 ATG13O75143 517 aa17.01■□□□□ 0.31
SMPD4-207ENST00000435455 EGFP01133 1207 aa17.01■□□□□ 0.31
SMPD4-207ENST00000435455 KRT9P35527 623 aa17.01■□□□□ 0.31
SMPD4-207ENST00000435455 GAS6Q14393 721 aa17.01■□□□□ 0.31
SMPD4-207ENST00000435455 PREPLQ4J6C6 727 aaPredicted RBP17.01■□□□□ 0.31
SMPD4-207ENST00000435455 MSANTD2Q6P1R3 559 aa17.01■□□□□ 0.31
SMPD4-207ENST00000435455 EDEM1Q92611 657 aa17.01■□□□□ 0.31
SMPD4-207ENST00000435455 PLD4Q96BZ4 506 aa17.01■□□□□ 0.31
SMPD4-207ENST00000435455 TRIM62Q9BVG3 475 aa17.01■□□□□ 0.31
SMPD4-207ENST00000435455 NAA15Q9BXJ9 866 aaKnown RBP17.01■□□□□ 0.31
SMPD4-207ENST00000435455 SLC4A5Q9BY07 1137 aa17.01■□□□□ 0.31
SMPD4-207ENST00000435455 STK33Q9BYT3 514 aa17.01■□□□□ 0.31
SMPD4-207ENST00000435455 MIS12Q9H081 205 aa17.01■□□□□ 0.31
SMPD4-207ENST00000435455 LHX5Q9H2C1 402 aa17.01■□□□□ 0.31
SMPD4-207ENST00000435455 HBS1LQ9Y450 684 aaKnown RBP17.01■□□□□ 0.31
SMPD4-207ENST00000435455 CEP83Q9Y592 693 aa17.01■□□□□ 0.31
SMPD4-207ENST00000435455 KIAA1549LQ6ZVL6 1849 aa17■□□□□ 0.31
SMPD4-207ENST00000435455 PAPSS2O95340 614 aaPredicted RBP17■□□□□ 0.31
SMPD4-207ENST00000435455 HMBSP08397 361 aa17■□□□□ 0.31
SMPD4-207ENST00000435455 CORO1AP31146 461 aaKnown RBP17■□□□□ 0.31
SMPD4-207ENST00000435455 NRLP54845 237 aa17■□□□□ 0.31
SMPD4-207ENST00000435455 TMEM110Q86TL2 294 aa17■□□□□ 0.31
SMPD4-207ENST00000435455 SLC47A2Q86VL8 602 aa17■□□□□ 0.31
SMPD4-207ENST00000435455 TMEM25Q86YD3 366 aa17■□□□□ 0.31
SMPD4-207ENST00000435455 FMNL3Q8IVF7 1028 aa17■□□□□ 0.31
SMPD4-207ENST00000435455 CLEC4CQ8WTT0 213 aa17■□□□□ 0.31
SMPD4-207ENST00000435455 NOX5Q96PH1 765 aa17■□□□□ 0.31
SMPD4-207ENST00000435455 PNKPQ96T60 521 aa17■□□□□ 0.31
SMPD4-207ENST00000435455 PHOX2BQ99453 314 aa17■□□□□ 0.31
SMPD4-207ENST00000435455 GANQ9H2C0 597 aa17■□□□□ 0.31
SMPD4-207ENST00000435455 WDR35Q9P2L0 1181 aa17■□□□□ 0.31
SMPD4-207ENST00000435455 CHURC1-FNTBB4DL54 471 aa16.99■□□□□ 0.31
SMPD4-207ENST00000435455 RNF40O75150 1001 aa16.99■□□□□ 0.31
SMPD4-207ENST00000435455 APODP05090 189 aa16.99■□□□□ 0.31
SMPD4-207ENST00000435455 PNMA6AP0CW24 399 aaPredicted RBP16.99■□□□□ 0.31
SMPD4-207ENST00000435455 CHKAP35790 457 aa16.99■□□□□ 0.31
SMPD4-207ENST00000435455 ZNF165P49910 485 aa16.99■□□□□ 0.31
SMPD4-207ENST00000435455 SNX16P57768 344 aa16.99■□□□□ 0.31
SMPD4-207ENST00000435455 SATB1Q01826 763 aa16.99■□□□□ 0.31
SMPD4-207ENST00000435455 PDCLQ13371 301 aa16.99■□□□□ 0.31
SMPD4-207ENST00000435455 ANO4Q32M45 955 aa16.99■□□□□ 0.31
SMPD4-207ENST00000435455 SCUBE3Q8IX30 993 aa16.99■□□□□ 0.31
SMPD4-207ENST00000435455 FAM149B1Q96BN6 582 aa16.99■□□□□ 0.31
SMPD4-207ENST00000435455 HSD3B7Q9H2F3 369 aa16.99■□□□□ 0.31
SMPD4-207ENST00000435455 SEMA4AQ9H3S1 761 aa16.99■□□□□ 0.31
SMPD4-207ENST00000435455 ARHGEF4Q9NR80 690 aa16.99■□□□□ 0.31
SMPD4-207ENST00000435455 MARK1Q9P0L2 795 aa16.99■□□□□ 0.31
SMPD4-207ENST00000435455 CYTH4Q9UIA0 394 aa16.99■□□□□ 0.31
SMPD4-207ENST00000435455 SIK3Q9Y2K2 1263 aa16.99■□□□□ 0.31
SMPD4-207ENST00000435455 PCDHGA2Q9Y5H1 932 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms