RNA–Protein interactions for RNA: ENST00000430982.1

PTCD1-204, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-204ENST00000430982 USP3Q9Y6I4 520 aa15.98■□□□□ 0.15
PTCD1-204ENST00000430982 NUP210Q8TEM1 1887 aaPredicted RBP15.97■□□□□ 0.15
PTCD1-204ENST00000430982 ANKRD11Q6UB99 2663 aaPredicted RBP15.97■□□□□ 0.15
PTCD1-204ENST00000430982 LAMA1P25391 3075 aa15.97■□□□□ 0.15
PTCD1-204ENST00000430982 BECN2A8MW95 431 aa15.97■□□□□ 0.15
PTCD1-204ENST00000430982 THAP12O43422 761 aa15.97■□□□□ 0.15
PTCD1-204ENST00000430982 MED7O43513 233 aa15.97■□□□□ 0.15
PTCD1-204ENST00000430982 TLR5O60602 858 aa15.97■□□□□ 0.15
PTCD1-204ENST00000430982 RARGP13631 454 aa15.97■□□□□ 0.15
PTCD1-204ENST00000430982 LCP1P13796 627 aa15.97■□□□□ 0.15
PTCD1-204ENST00000430982 ARSAP15289 507 aa15.97■□□□□ 0.15
PTCD1-204ENST00000430982 ZNF18P17022 549 aa15.97■□□□□ 0.15
PTCD1-204ENST00000430982 GNA15P30679 374 aa15.97■□□□□ 0.15
PTCD1-204ENST00000430982 PLA2G4AP47712 749 aa15.97■□□□□ 0.15
PTCD1-204ENST00000430982 SOX9P48436 509 aa15.97■□□□□ 0.15
PTCD1-204ENST00000430982 IFNAR2P48551 515 aa15.97■□□□□ 0.15
PTCD1-204ENST00000430982 ZNF165P49910 485 aa15.97■□□□□ 0.15
PTCD1-204ENST00000430982 TUBP50607 506 aa15.97■□□□□ 0.15
PTCD1-204ENST00000430982 ZXDBP98169 803 aa15.97■□□□□ 0.15
PTCD1-204ENST00000430982 ADIGQ0VDE8 80 aa15.97■□□□□ 0.15
PTCD1-204ENST00000430982 RAPGEF1Q13905 1077 aa15.97■□□□□ 0.15
PTCD1-204ENST00000430982 PDGFRLQ15198 375 aa15.97■□□□□ 0.15
PTCD1-204ENST00000430982 SKOR2Q2VWA4 1001 aaPredicted RBP15.97■□□□□ 0.15
PTCD1-204ENST00000430982 PKDCCQ504Y2 493 aa15.97■□□□□ 0.15
PTCD1-204ENST00000430982 RAB41Q5JT25 222 aa15.97■□□□□ 0.15
PTCD1-204ENST00000430982 KLHDC7AQ5VTJ3 777 aa15.97■□□□□ 0.15
PTCD1-204ENST00000430982 C1orf228Q6PIY5 440 aa15.97■□□□□ 0.15
PTCD1-204ENST00000430982 WDR5BQ86VZ2 330 aa15.97■□□□□ 0.15
PTCD1-204ENST00000430982 SIX6OS1Q8N1H7 587 aa15.97■□□□□ 0.15
PTCD1-204ENST00000430982 SHC3Q92529 594 aa15.97■□□□□ 0.15
PTCD1-204ENST00000430982 FAM83CQ9BQN1 747 aa15.97■□□□□ 0.15
PTCD1-204ENST00000430982 FUCA2Q9BTY2 467 aa15.97■□□□□ 0.15
PTCD1-204ENST00000430982 ULBP1Q9BZM6 244 aa15.97■□□□□ 0.15
PTCD1-204ENST00000430982 EBF3Q9H4W6 596 aa15.97■□□□□ 0.15
PTCD1-204ENST00000430982 ACP6Q9NPH0 428 aa15.97■□□□□ 0.15
PTCD1-204ENST00000430982 RXFP3Q9NSD7 469 aa15.97■□□□□ 0.15
PTCD1-204ENST00000430982 OSER1Q9NX31 292 aa15.97■□□□□ 0.15
PTCD1-204ENST00000430982 DUS2Q9NX74 493 aaKnown RBP15.97■□□□□ 0.15
PTCD1-204ENST00000430982 CFAP97Q9P2B7 532 aa15.97■□□□□ 0.15
PTCD1-204ENST00000430982 FHOD1Q9Y613 1164 aa15.97■□□□□ 0.15
PTCD1-204ENST00000430982 WNT6Q9Y6F9 365 aa15.97■□□□□ 0.15
PTCD1-204ENST00000430982 IGF2RP11717 2491 aa15.97■□□□□ 0.15
PTCD1-204ENST00000430982 OBSL1O75147 1896 aa15.97■□□□□ 0.15
PTCD1-204ENST00000430982 PIK3R2O00459 728 aa15.96■□□□□ 0.15
PTCD1-204ENST00000430982 SCAMP3O14828 347 aaKnown RBP15.96■□□□□ 0.15
PTCD1-204ENST00000430982 TBX18O95935 607 aa15.96■□□□□ 0.15
PTCD1-204ENST00000430982 ZBED1O96006 694 aa15.96■□□□□ 0.15
PTCD1-204ENST00000430982 ZNF806P0C7X5 589 aa15.96■□□□□ 0.15
PTCD1-204ENST00000430982 PNMA6AP0CW24 399 aaPredicted RBP15.96■□□□□ 0.15
PTCD1-204ENST00000430982 RALAP11233 206 aa15.96■□□□□ 0.15
PTCD1-204ENST00000430982 HOXB3P14651 431 aaPredicted RBP15.96■□□□□ 0.15
PTCD1-204ENST00000430982 TCF3P15923 654 aa15.96■□□□□ 0.15
PTCD1-204ENST00000430982 DRAP1Q14919 205 aaPredicted RBP15.96■□□□□ 0.15
PTCD1-204ENST00000430982 SF3A2Q15428 464 aaKnown RBP15.96■□□□□ 0.15
PTCD1-204ENST00000430982 ITPRIPL2Q3MIP1 535 aa15.96■□□□□ 0.15
PTCD1-204ENST00000430982 DPY19L2P1Q6NXN4 242 aa15.96■□□□□ 0.15
PTCD1-204ENST00000430982 DENND1BQ6P3S1 775 aa15.96■□□□□ 0.15
PTCD1-204ENST00000430982 SCD5Q86SK9 330 aa15.96■□□□□ 0.15
PTCD1-204ENST00000430982 DDX42Q86XP3 938 aaKnown RBP eCLIP15.96■□□□□ 0.15
PTCD1-204ENST00000430982 DHX40Q8IX18 779 aaKnown RBP15.96■□□□□ 0.15
PTCD1-204ENST00000430982 ARHGAP18Q8N392 663 aa15.96■□□□□ 0.15
PTCD1-204ENST00000430982 OSCP1Q8WVF1 389 aa15.96■□□□□ 0.15
PTCD1-204ENST00000430982 NDRG1Q92597 394 aaKnown RBP15.96■□□□□ 0.15
PTCD1-204ENST00000430982 LOXL4Q96JB6 756 aa15.96■□□□□ 0.15
PTCD1-204ENST00000430982 PCMTD1Q96MG8 357 aaPredicted RBP15.96■□□□□ 0.15
PTCD1-204ENST00000430982 HSD3B7Q9H2F3 369 aa15.96■□□□□ 0.15
PTCD1-204ENST00000430982 C8orf33Q9H7E9 229 aaPredicted RBP15.96■□□□□ 0.15
PTCD1-204ENST00000430982 HPS4Q9NQG7 708 aa15.96■□□□□ 0.15
PTCD1-204ENST00000430982 C2orf42Q9NWW7 574 aa15.96■□□□□ 0.15
PTCD1-204ENST00000430982 NUDT5Q9UKK9 219 aa15.96■□□□□ 0.15
PTCD1-204ENST00000430982 SPAG17Q6Q759 2223 aa15.95■□□□□ 0.14
PTCD1-204ENST00000430982 WDFY3Q8IZQ1 3526 aa15.95■□□□□ 0.14
PTCD1-204ENST00000430982 LGALS16A8MUM7 142 aa15.95■□□□□ 0.14
PTCD1-204ENST00000430982 FOXN3O00409 490 aaPredicted RBP15.95■□□□□ 0.14
PTCD1-204ENST00000430982 MDM4O15151 490 aa15.95■□□□□ 0.14
PTCD1-204ENST00000430982 IRF1P10914 325 aa15.95■□□□□ 0.14
PTCD1-204ENST00000430982 ATP1A3P13637 1013 aa15.95■□□□□ 0.14
PTCD1-204ENST00000430982 ATP5C1P36542 298 aaKnown RBP15.95■□□□□ 0.14
PTCD1-204ENST00000430982 PSEN1P49768 467 aa15.95■□□□□ 0.14
PTCD1-204ENST00000430982 KLK7P49862 253 aa15.95■□□□□ 0.14
PTCD1-204ENST00000430982 UBXN1Q04323 297 aa15.95■□□□□ 0.14
PTCD1-204ENST00000430982 RUNX3Q13761 415 aa15.95■□□□□ 0.14
PTCD1-204ENST00000430982 LRRC32Q14392 662 aa15.95■□□□□ 0.14
PTCD1-204ENST00000430982 AASDHQ4L235 1098 aaPredicted RBP15.95■□□□□ 0.14
PTCD1-204ENST00000430982 PLA2G2CQ5R387 149 aa15.95■□□□□ 0.14
PTCD1-204ENST00000430982 C10orf120Q5SQS8 335 aa15.95■□□□□ 0.14
PTCD1-204ENST00000430982 PMF1Q6P1K2 205 aa15.95■□□□□ 0.14
PTCD1-204ENST00000430982 Q6ZS52 159 aa15.95■□□□□ 0.14
PTCD1-204ENST00000430982 TADA2BQ86TJ2 420 aa15.95■□□□□ 0.14
PTCD1-204ENST00000430982 KDF1Q8NAX2 398 aaPredicted RBP15.95■□□□□ 0.14
PTCD1-204ENST00000430982 SLC35F5Q8WV83 523 aa15.95■□□□□ 0.14
PTCD1-204ENST00000430982 ZNF606Q8WXB4 792 aa15.95■□□□□ 0.14
PTCD1-204ENST00000430982 KCTD13Q8WZ19 329 aa15.95■□□□□ 0.14
PTCD1-204ENST00000430982 TMEM121BQ9BXQ6 578 aaPredicted RBP15.95■□□□□ 0.14
PTCD1-204ENST00000430982 CYLDQ9NQC7 956 aa15.95■□□□□ 0.14
PTCD1-204ENST00000430982 RBM12Q9NTZ6 932 aaKnown RBP15.95■□□□□ 0.14
PTCD1-204ENST00000430982 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.95■□□□□ 0.14
PTCD1-204ENST00000430982 WASF3Q9UPY6 502 aa15.95■□□□□ 0.14
PTCD1-204ENST00000430982 SH3BP1Q9Y3L3 701 aa15.95■□□□□ 0.14
PTCD1-204ENST00000430982 PKD1L2Q7Z442 2459 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms