RNA–Protein interactions for RNA: ENST00000429277.6

LDB3-205, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 5,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-205ENST00000429277 PAIP2BQ9ULR5 123 aaKnown RBP13.16□□□□□ -0.3
LDB3-205ENST00000429277 SYNPO2Q9UMS6 1093 aa13.16□□□□□ -0.3
LDB3-205ENST00000429277 PCDHB12Q9Y5F1 795 aa13.16□□□□□ -0.3
LDB3-205ENST00000429277 SALL1Q9NSC2 1324 aa13.16□□□□□ -0.3
LDB3-205ENST00000429277 ZNF23P17027 643 aa13.16□□□□□ -0.3
LDB3-205ENST00000429277 SERPINB3P29508 390 aa13.16□□□□□ -0.3
LDB3-205ENST00000429277 CDH17Q12864 832 aa13.16□□□□□ -0.3
LDB3-205ENST00000429277 GPR141Q7Z602 305 aa13.16□□□□□ -0.3
LDB3-205ENST00000429277 LRRC34Q8IZ02 419 aa13.16□□□□□ -0.3
LDB3-205ENST00000429277 ABRAQ8N0Z2 381 aa13.16□□□□□ -0.3
LDB3-205ENST00000429277 ASB2Q96Q27 587 aa13.16□□□□□ -0.3
LDB3-205ENST00000429277 MRPL9Q9BYD2 267 aaKnown RBP13.16□□□□□ -0.3
LDB3-205ENST00000429277 TMBIM4Q9HC24 238 aa13.16□□□□□ -0.3
LDB3-205ENST00000429277 SLC40A1Q9NP59 571 aa13.16□□□□□ -0.3
LDB3-205ENST00000429277 SYNCRIPO60506 623 aaKnown RBP13.15□□□□□ -0.3
LDB3-205ENST00000429277 SKAP2O75563 359 aaPredicted RBP13.15□□□□□ -0.3
LDB3-205ENST00000429277 CYP2A7P20853 494 aa13.15□□□□□ -0.3
LDB3-205ENST00000429277 NPY2RP49146 381 aa13.15□□□□□ -0.3
LDB3-205ENST00000429277 CENPAP49450 140 aa13.15□□□□□ -0.3
LDB3-205ENST00000429277 GLRA4Q5JXX5 417 aa13.15□□□□□ -0.3
LDB3-205ENST00000429277 OTOAQ7RTW8 1153 aa13.15□□□□□ -0.3
LDB3-205ENST00000429277 C10orf53Q8N6V4 93 aa13.15□□□□□ -0.3
LDB3-205ENST00000429277 BBS2Q9BXC9 721 aa13.15□□□□□ -0.3
LDB3-205ENST00000429277 SENP2Q9HC62 589 aa13.15□□□□□ -0.3
LDB3-205ENST00000429277 PLA2G4CQ9UP65 541 aa13.15□□□□□ -0.3
LDB3-205ENST00000429277 PCDHB5Q9Y5E4 795 aa13.15□□□□□ -0.3
LDB3-205ENST00000429277 CXCL11O14625 94 aa13.15□□□□□ -0.3
LDB3-205ENST00000429277 VPS4BO75351 444 aa13.15□□□□□ -0.3
LDB3-205ENST00000429277 HPGDP15428 266 aa13.15□□□□□ -0.3
LDB3-205ENST00000429277 PSMC3P17980 439 aa13.15□□□□□ -0.3
LDB3-205ENST00000429277 PSMD7P51665 324 aa13.15□□□□□ -0.3
LDB3-205ENST00000429277 DDX39BQ13838 428 aaKnown RBP13.15□□□□□ -0.3
LDB3-205ENST00000429277 ZPBP2Q6X784 338 aa13.15□□□□□ -0.3
LDB3-205ENST00000429277 C11orf96Q7Z7L8 435 aa13.15□□□□□ -0.3
LDB3-205ENST00000429277 SCUBE1Q8IWY4 988 aa13.15□□□□□ -0.3
LDB3-205ENST00000429277 REXO1L1PQ8IX06 675 aa13.15□□□□□ -0.3
LDB3-205ENST00000429277 VAT1Q99536 393 aa13.15□□□□□ -0.3
LDB3-205ENST00000429277 PDCD2LQ9BRP1 358 aa13.15□□□□□ -0.3
LDB3-205ENST00000429277 FICDQ9BVA6 458 aa13.15□□□□□ -0.3
LDB3-205ENST00000429277 HACD1B0YJ81 288 aa13.15□□□□□ -0.3
LDB3-205ENST00000429277 ALDH2P05091 517 aa13.15□□□□□ -0.3
LDB3-205ENST00000429277 PIK3CGP48736 1102 aa13.15□□□□□ -0.3
LDB3-205ENST00000429277 ZNF410Q86VK4 478 aa13.15□□□□□ -0.3
LDB3-205ENST00000429277 PPP1R10Q96QC0 940 aaKnown RBP13.15□□□□□ -0.3
LDB3-205ENST00000429277 DCLRE1BQ9H816 532 aa13.15□□□□□ -0.3
LDB3-205ENST00000429277 CAAP1Q9H8G2 361 aa13.15□□□□□ -0.3
LDB3-205ENST00000429277 DMAP1Q9NPF5 467 aaPredicted RBP13.15□□□□□ -0.3
LDB3-205ENST00000429277 ANKRD6Q9Y2G4 727 aa13.15□□□□□ -0.3
LDB3-205ENST00000429277 A0A087WZ62 844 aa13.15□□□□□ -0.3
LDB3-205ENST00000429277 ZNF839A8K0R7 811 aa13.15□□□□□ -0.3
LDB3-205ENST00000429277 CNOT3O75175 753 aaKnown RBP13.15□□□□□ -0.3
LDB3-205ENST00000429277 RPN2P04844 631 aa13.15□□□□□ -0.3
LDB3-205ENST00000429277 ERVK-10P10266 1014 aa13.15□□□□□ -0.3
LDB3-205ENST00000429277 JAK1P23458 1154 aa13.15□□□□□ -0.3
LDB3-205ENST00000429277 SKP1P63208 163 aa13.15□□□□□ -0.3
LDB3-205ENST00000429277 GCNT1Q02742 428 aa13.15□□□□□ -0.3
LDB3-205ENST00000429277 PRKAA1Q13131 559 aa13.15□□□□□ -0.3
LDB3-205ENST00000429277 C1DQ13901 141 aaKnown RBP13.15□□□□□ -0.3
LDB3-205ENST00000429277 ERMARDQ5T6L9 678 aa13.15□□□□□ -0.3
LDB3-205ENST00000429277 GRTP1Q5TC63 336 aa13.15□□□□□ -0.3
LDB3-205ENST00000429277 MARC1Q5VT66 337 aa13.15□□□□□ -0.3
LDB3-205ENST00000429277 REPS1Q96D71 796 aa13.15□□□□□ -0.3
LDB3-205ENST00000429277 SERPINB11Q96P15 392 aa13.15□□□□□ -0.3
LDB3-205ENST00000429277 CBWD1Q9BRT8 395 aa13.15□□□□□ -0.3
LDB3-205ENST00000429277 UXTQ9UBK9 157 aaPredicted RBP13.15□□□□□ -0.3
LDB3-205ENST00000429277 RTN3O95197 1032 aaPredicted RBP13.14□□□□□ -0.31
LDB3-205ENST00000429277 PAEPP09466 180 aa13.14□□□□□ -0.31
LDB3-205ENST00000429277 CRABP2P29373 138 aa13.14□□□□□ -0.31
LDB3-205ENST00000429277 ALDH6A1Q02252 535 aaKnown RBP13.14□□□□□ -0.31
LDB3-205ENST00000429277 BTKQ06187 659 aa13.14□□□□□ -0.31
LDB3-205ENST00000429277 EFEMP1Q12805 493 aa13.14□□□□□ -0.31
LDB3-205ENST00000429277 CDK20Q8IZL9 346 aa13.14□□□□□ -0.31
LDB3-205ENST00000429277 RXFP2Q8WXD0 754 aa13.14□□□□□ -0.31
LDB3-205ENST00000429277 VTA1Q9NP79 307 aa13.14□□□□□ -0.31
LDB3-205ENST00000429277 C2CD2LO14523 706 aa13.14□□□□□ -0.31
LDB3-205ENST00000429277 ARP10275 920 aa13.14□□□□□ -0.31
LDB3-205ENST00000429277 CD151P48509 253 aa13.14□□□□□ -0.31
LDB3-205ENST00000429277 SLC16A1P53985 500 aa13.14□□□□□ -0.31
LDB3-205ENST00000429277 ERVK-24P63145 666 aa13.14□□□□□ -0.31
LDB3-205ENST00000429277 CEP78Q5JTW2 689 aa13.14□□□□□ -0.31
LDB3-205ENST00000429277 FAXCQ5TGI0 409 aa13.14□□□□□ -0.31
LDB3-205ENST00000429277 PHACTR4Q8IZ21 702 aa13.14□□□□□ -0.31
LDB3-205ENST00000429277 YME1L1Q96TA2 773 aa13.14□□□□□ -0.31
LDB3-205ENST00000429277 MTG1Q9BT17 334 aaPredicted RBP13.14□□□□□ -0.31
LDB3-205ENST00000429277 FBXO28Q9NVF7 368 aa13.14□□□□□ -0.31
LDB3-205ENST00000429277 VANGL2Q9ULK5 521 aa13.14□□□□□ -0.31
LDB3-205ENST00000429277 NRXN1Q9ULB1 1477 aa13.14□□□□□ -0.31
LDB3-205ENST00000429277 MROH7Q68CQ1 1323 aa13.14□□□□□ -0.31
LDB3-205ENST00000429277 E2F8A0AVK6 867 aa13.14□□□□□ -0.31
LDB3-205ENST00000429277 PIK3CDO00329 1044 aa13.14□□□□□ -0.31
LDB3-205ENST00000429277 NQO1P15559 274 aaKnown RBP13.14□□□□□ -0.31
LDB3-205ENST00000429277 RRM1P23921 792 aa13.14□□□□□ -0.31
LDB3-205ENST00000429277 TKTL1P51854 596 aa13.14□□□□□ -0.31
LDB3-205ENST00000429277 PPIL2Q13356 520 aa13.14□□□□□ -0.31
LDB3-205ENST00000429277 STARD3Q14849 445 aa13.14□□□□□ -0.31
LDB3-205ENST00000429277 CAVIN3Q969G5 261 aa13.14□□□□□ -0.31
LDB3-205ENST00000429277 SYT15Q9BQS2 421 aa13.14□□□□□ -0.31
LDB3-205ENST00000429277 KIAA1683Q9H0B3 1180 aa13.14□□□□□ -0.31
LDB3-205ENST00000429277 THG1LQ9NWX6 298 aaKnown RBP13.14□□□□□ -0.31
LDB3-205ENST00000429277 COMMD8Q9NX08 183 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms