RNA–Protein interactions for RNA: ENST00000427722.2

RFX3-AS1-202, RFX3 antisense RNA 1, humanhuman

TSL 5 BASIC

Gene RFX3-AS1, Length 1,088 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-AS1-202ENST00000427722 TICRRQ7Z2Z1 1910 aa9.68□□□□□ -0.86
RFX3-AS1-202ENST00000427722 RNF225M0QZC1 329 aaPredicted RBP9.68□□□□□ -0.86
RFX3-AS1-202ENST00000427722 S1PR4O95977 384 aa9.68□□□□□ -0.86
RFX3-AS1-202ENST00000427722 LMNAP02545 664 aaKnown RBP9.68□□□□□ -0.86
RFX3-AS1-202ENST00000427722 TDGF1P13385 188 aa9.68□□□□□ -0.86
RFX3-AS1-202ENST00000427722 DRD1P21728 446 aa9.68□□□□□ -0.86
RFX3-AS1-202ENST00000427722 ATP5C1P36542 298 aaKnown RBP9.68□□□□□ -0.86
RFX3-AS1-202ENST00000427722 OPRD1P41143 372 aa9.68□□□□□ -0.86
RFX3-AS1-202ENST00000427722 PLA2G4AP47712 749 aa9.68□□□□□ -0.86
RFX3-AS1-202ENST00000427722 RGS7P49802 495 aa9.68□□□□□ -0.86
RFX3-AS1-202ENST00000427722 ZNF132P52740 706 aa9.68□□□□□ -0.86
RFX3-AS1-202ENST00000427722 YWHAGP61981 247 aaKnown RBP eCLIP9.68□□□□□ -0.86
RFX3-AS1-202ENST00000427722 APBA1Q02410 837 aa9.68□□□□□ -0.86
RFX3-AS1-202ENST00000427722 KDSRQ06136 332 aa9.68□□□□□ -0.86
RFX3-AS1-202ENST00000427722 DMWDQ09019 674 aa9.68□□□□□ -0.86
RFX3-AS1-202ENST00000427722 EFEMP1Q12805 493 aa9.68□□□□□ -0.86
RFX3-AS1-202ENST00000427722 RAB41Q5JT25 222 aa9.68□□□□□ -0.86
RFX3-AS1-202ENST00000427722 GJB7Q6PEY0 223 aa9.68□□□□□ -0.86
RFX3-AS1-202ENST00000427722 KLHDC10Q6PID8 442 aa9.68□□□□□ -0.86
RFX3-AS1-202ENST00000427722 TRIM65Q6PJ69 517 aa9.68□□□□□ -0.86
RFX3-AS1-202ENST00000427722 FAM114A1Q8IWE2 563 aa9.68□□□□□ -0.86
RFX3-AS1-202ENST00000427722 ARHGAP18Q8N392 663 aa9.68□□□□□ -0.86
RFX3-AS1-202ENST00000427722 SYNPOQ8N3V7 929 aa9.68□□□□□ -0.86
RFX3-AS1-202ENST00000427722 NDRG1Q92597 394 aaKnown RBP9.68□□□□□ -0.86
RFX3-AS1-202ENST00000427722 EZH1Q92800 747 aaPredicted RBP9.68□□□□□ -0.86
RFX3-AS1-202ENST00000427722 SECISBP2LQ93073 1101 aaKnown RBP9.68□□□□□ -0.86
RFX3-AS1-202ENST00000427722 HINFPQ9BQA5 517 aa9.68□□□□□ -0.86
RFX3-AS1-202ENST00000427722 KLF16Q9BXK1 252 aaPredicted RBP9.68□□□□□ -0.86
RFX3-AS1-202ENST00000427722 THAP9Q9H5L6 903 aa9.68□□□□□ -0.86
RFX3-AS1-202ENST00000427722 UBE2TQ9NPD8 197 aaPredicted RBP9.68□□□□□ -0.86
RFX3-AS1-202ENST00000427722 CLIC5Q9NZA1 410 aa9.68□□□□□ -0.86
RFX3-AS1-202ENST00000427722 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.68□□□□□ -0.86
RFX3-AS1-202ENST00000427722 ZFHX2Q9C0A1 2572 aaPredicted RBP9.67□□□□□ -0.86
RFX3-AS1-202ENST00000427722 PTPRDP23468 1912 aa9.67□□□□□ -0.86
RFX3-AS1-202ENST00000427722 CHURC1-FNTBB4DL54 471 aa9.67□□□□□ -0.86
RFX3-AS1-202ENST00000427722 K7ESF4 209 aa9.67□□□□□ -0.86
RFX3-AS1-202ENST00000427722 PIK3R2O00459 728 aa9.67□□□□□ -0.86
RFX3-AS1-202ENST00000427722 PES1O00541 588 aaKnown RBP9.67□□□□□ -0.86
RFX3-AS1-202ENST00000427722 ZBED1O96006 694 aa9.67□□□□□ -0.86
RFX3-AS1-202ENST00000427722 HMBSP08397 361 aa9.67□□□□□ -0.86
RFX3-AS1-202ENST00000427722 LCP1P13796 627 aa9.67□□□□□ -0.86
RFX3-AS1-202ENST00000427722 PRKCSHP14314 528 aaPredicted RBP9.67□□□□□ -0.86
RFX3-AS1-202ENST00000427722 ERCC5P28715 1186 aaPredicted RBP9.67□□□□□ -0.86
RFX3-AS1-202ENST00000427722 HOXC13P31276 330 aa9.67□□□□□ -0.86
RFX3-AS1-202ENST00000427722 FNTBP49356 437 aa9.67□□□□□ -0.86
RFX3-AS1-202ENST00000427722 SEC13P55735 322 aa9.67□□□□□ -0.86
RFX3-AS1-202ENST00000427722 MAN2A1Q16706 1144 aa9.67□□□□□ -0.86
RFX3-AS1-202ENST00000427722 EXOC3L4Q17RC7 722 aa9.67□□□□□ -0.86
RFX3-AS1-202ENST00000427722 ANO4Q32M45 955 aa9.67□□□□□ -0.86
RFX3-AS1-202ENST00000427722 FBXO43Q4G163 708 aa9.67□□□□□ -0.86
RFX3-AS1-202ENST00000427722 PKDCCQ504Y2 493 aa9.67□□□□□ -0.86
RFX3-AS1-202ENST00000427722 RHBDF2Q6PJF5 856 aa9.67□□□□□ -0.86
RFX3-AS1-202ENST00000427722 LCLAT1Q6UWP7 414 aa9.67□□□□□ -0.86
RFX3-AS1-202ENST00000427722 GBP6Q6ZN66 633 aa9.67□□□□□ -0.86
RFX3-AS1-202ENST00000427722 SFTPA1Q8IWL2 248 aa9.67□□□□□ -0.86
RFX3-AS1-202ENST00000427722 ADGRG2Q8IZP9 1017 aa9.67□□□□□ -0.86
RFX3-AS1-202ENST00000427722 ZBTB44Q8NCP5 570 aa9.67□□□□□ -0.86
RFX3-AS1-202ENST00000427722 RPLP0P6Q8NHW5 317 aa9.67□□□□□ -0.86
RFX3-AS1-202ENST00000427722 NELL1Q92832 810 aa9.67□□□□□ -0.86
RFX3-AS1-202ENST00000427722 OTUB2Q96DC9 234 aa9.67□□□□□ -0.86
RFX3-AS1-202ENST00000427722 HHIPQ96QV1 700 aa9.67□□□□□ -0.86
RFX3-AS1-202ENST00000427722 CDK5RAP1Q96SZ6 601 aaKnown RBP9.67□□□□□ -0.86
RFX3-AS1-202ENST00000427722 SPSB2Q99619 263 aa9.67□□□□□ -0.86
RFX3-AS1-202ENST00000427722 FAM126AQ9BYI3 521 aaPredicted RBP9.67□□□□□ -0.86
RFX3-AS1-202ENST00000427722 UBXN6Q9BZV1 441 aa9.67□□□□□ -0.86
RFX3-AS1-202ENST00000427722 SEMA4AQ9H3S1 761 aa9.67□□□□□ -0.86
RFX3-AS1-202ENST00000427722 POLR3BQ9NW08 1133 aaPredicted RBP9.67□□□□□ -0.86
RFX3-AS1-202ENST00000427722 MARCH2Q9P0N8 246 aa9.67□□□□□ -0.86
RFX3-AS1-202ENST00000427722 KIAA1257Q9ULG3 409 aa9.67□□□□□ -0.86
RFX3-AS1-202ENST00000427722 SMG5Q9UPR3 1016 aaKnown RBP9.67□□□□□ -0.86
RFX3-AS1-202ENST00000427722 GPR179Q6PRD1 2367 aa9.67□□□□□ -0.86
RFX3-AS1-202ENST00000427722 SLC12A8A0AV02 714 aa9.66□□□□□ -0.86
RFX3-AS1-202ENST00000427722 GTPBP10A4D1E9 387 aaKnown RBP9.66□□□□□ -0.86
RFX3-AS1-202ENST00000427722 HOXC11O43248 304 aaPredicted RBP9.66□□□□□ -0.86
RFX3-AS1-202ENST00000427722 GREM1O60565 184 aa9.66□□□□□ -0.86
RFX3-AS1-202ENST00000427722 ATG13O75143 517 aa9.66□□□□□ -0.86
RFX3-AS1-202ENST00000427722 STC2O76061 302 aa9.66□□□□□ -0.86
RFX3-AS1-202ENST00000427722 PAPSS2O95340 614 aaPredicted RBP9.66□□□□□ -0.86
RFX3-AS1-202ENST00000427722 SLC9A1P19634 815 aa9.66□□□□□ -0.86
RFX3-AS1-202ENST00000427722 PON1P27169 355 aa9.66□□□□□ -0.86
RFX3-AS1-202ENST00000427722 USP8P40818 1118 aa9.66□□□□□ -0.86
RFX3-AS1-202ENST00000427722 SLC6A11P48066 632 aa9.66□□□□□ -0.86
RFX3-AS1-202ENST00000427722 PXNP49023 591 aaPredicted RBP9.66□□□□□ -0.86
RFX3-AS1-202ENST00000427722 NRLP54845 237 aa9.66□□□□□ -0.86
RFX3-AS1-202ENST00000427722 MFAP3P55082 362 aa9.66□□□□□ -0.86
RFX3-AS1-202ENST00000427722 GAD2Q05329 585 aa9.66□□□□□ -0.86
RFX3-AS1-202ENST00000427722 MESP2Q0VG99 397 aa9.66□□□□□ -0.86
RFX3-AS1-202ENST00000427722 SRSF5Q13243 272 aaKnown RBP9.66□□□□□ -0.86
RFX3-AS1-202ENST00000427722 STILQ15468 1287 aa9.66□□□□□ -0.86
RFX3-AS1-202ENST00000427722 CNGA2Q16280 664 aa9.66□□□□□ -0.86
RFX3-AS1-202ENST00000427722 LPAL2Q16609 132 aa9.66□□□□□ -0.86
RFX3-AS1-202ENST00000427722 ARHGAP44Q17R89 818 aa9.66□□□□□ -0.86
RFX3-AS1-202ENST00000427722 BTBD8Q5XKL5 378 aa9.66□□□□□ -0.86
RFX3-AS1-202ENST00000427722 DENND1BQ6P3S1 775 aa9.66□□□□□ -0.86
RFX3-AS1-202ENST00000427722 TPGS1Q6ZTW0 290 aa9.66□□□□□ -0.86
RFX3-AS1-202ENST00000427722 ENOSF1Q7L5Y1 443 aa9.66□□□□□ -0.86
RFX3-AS1-202ENST00000427722 BHLHA9Q7RTU4 235 aa9.66□□□□□ -0.86
RFX3-AS1-202ENST00000427722 TMEM25Q86YD3 366 aa9.66□□□□□ -0.86
RFX3-AS1-202ENST00000427722 NAT16Q8N8M0 369 aa9.66□□□□□ -0.86
RFX3-AS1-202ENST00000427722 KCTD13Q8WZ19 329 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms