RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 ST7Q9NRC1 585 aa27.66■■■□□ 2.02
CDK9-202ENST00000421939 FOXN3O00409 490 aaPredicted RBP27.65■■■□□ 2.02
CDK9-202ENST00000421939 FBXO21O94952 628 aa27.65■■■□□ 2.02
CDK9-202ENST00000421939 PNMA6AP0CW24 399 aaPredicted RBP27.65■■■□□ 2.02
CDK9-202ENST00000421939 RPL34P49207 117 aaKnown RBP27.65■■■□□ 2.02
CDK9-202ENST00000421939 PTK2Q05397 1052 aa27.65■■■□□ 2.02
CDK9-202ENST00000421939 PPP2R5DQ14738 602 aa27.65■■■□□ 2.02
CDK9-202ENST00000421939 FBXO43Q4G163 708 aa27.65■■■□□ 2.02
CDK9-202ENST00000421939 ANO6Q4KMQ2 910 aa27.65■■■□□ 2.02
CDK9-202ENST00000421939 Q6ZNB5 142 aa27.65■■■□□ 2.02
CDK9-202ENST00000421939 FAM71AQ8IYT1 594 aa27.65■■■□□ 2.02
CDK9-202ENST00000421939 AOPEPQ8N6M6 819 aa27.65■■■□□ 2.02
CDK9-202ENST00000421939 STK32AQ8WU08 396 aa27.65■■■□□ 2.02
CDK9-202ENST00000421939 RNF139Q8WU17 664 aa27.65■■■□□ 2.02
CDK9-202ENST00000421939 SPHK2Q9NRA0 654 aa27.65■■■□□ 2.02
CDK9-202ENST00000421939 HOXC11O43248 304 aaPredicted RBP27.64■■■□□ 2.02
CDK9-202ENST00000421939 UCHL3P15374 230 aa27.64■■■□□ 2.02
CDK9-202ENST00000421939 ZNF18P17022 549 aa27.64■■■□□ 2.02
CDK9-202ENST00000421939 EIF2DP41214 584 aaKnown RBP27.64■■■□□ 2.02
CDK9-202ENST00000421939 ACADSBP45954 432 aa27.64■■■□□ 2.02
CDK9-202ENST00000421939 CXCL12P48061 93 aa27.64■■■□□ 2.02
CDK9-202ENST00000421939 SATB1Q01826 763 aa27.64■■■□□ 2.02
CDK9-202ENST00000421939 GAD2Q05329 585 aa27.64■■■□□ 2.02
CDK9-202ENST00000421939 DRAP1Q14919 205 aaPredicted RBP27.64■■■□□ 2.02
CDK9-202ENST00000421939 KLHL40Q2TBA0 621 aa27.64■■■□□ 2.02
CDK9-202ENST00000421939 FKBP15Q5T1M5 1219 aa27.64■■■□□ 2.02
CDK9-202ENST00000421939 TSSK4Q6SA08 328 aa27.64■■■□□ 2.02
CDK9-202ENST00000421939 CLEC4CQ8WTT0 213 aa27.64■■■□□ 2.02
CDK9-202ENST00000421939 EDEM1Q92611 657 aa27.64■■■□□ 2.02
CDK9-202ENST00000421939 MIS12Q9H081 205 aa27.64■■■□□ 2.02
CDK9-202ENST00000421939 PLCB1Q9NQ66 1216 aa27.64■■■□□ 2.02
CDK9-202ENST00000421939 ABCC13Q9NSE7 274 aa27.64■■■□□ 2.02
CDK9-202ENST00000421939 LIMA1Q9UHB6 759 aaKnown RBP27.64■■■□□ 2.02
CDK9-202ENST00000421939 SLC12A8A0AV02 714 aa27.63■■■□□ 2.01
CDK9-202ENST00000421939 PROB1E7EW31 1015 aa27.63■■■□□ 2.01
CDK9-202ENST00000421939 RNF40O75150 1001 aa27.63■■■□□ 2.01
CDK9-202ENST00000421939 HMBSP08397 361 aa27.63■■■□□ 2.01
CDK9-202ENST00000421939 COPB1P53618 953 aaKnown RBP27.63■■■□□ 2.01
CDK9-202ENST00000421939 ZC3H14Q6PJT7 736 aaKnown RBP27.63■■■□□ 2.01
CDK9-202ENST00000421939 C12orf40Q86WS4 652 aa27.63■■■□□ 2.01
CDK9-202ENST00000421939 EZH1Q92800 747 aaPredicted RBP27.63■■■□□ 2.01
CDK9-202ENST00000421939 GOLGA1Q92805 767 aa27.63■■■□□ 2.01
CDK9-202ENST00000421939 NAA15Q9BXJ9 866 aaKnown RBP27.63■■■□□ 2.01
CDK9-202ENST00000421939 DCLK3Q9C098 648 aa27.63■■■□□ 2.01
CDK9-202ENST00000421939 PCDHGC3Q9UN70 934 aa27.63■■■□□ 2.01
CDK9-202ENST00000421939 R4GN57 208 aa27.63■■■□□ 2.01
CDK9-202ENST00000421939 MYOFQ9NZM1 2061 aa27.63■■■□□ 2.01
CDK9-202ENST00000421939 DMDP11532 3685 aa27.62■■■□□ 2.01
CDK9-202ENST00000421939 LGALS16A8MUM7 142 aa27.62■■■□□ 2.01
CDK9-202ENST00000421939 SART1O43290 800 aaKnown RBP27.62■■■□□ 2.01
CDK9-202ENST00000421939 LTFP02788 710 aa27.62■■■□□ 2.01
CDK9-202ENST00000421939 KLKB1P03952 638 aa27.62■■■□□ 2.01
CDK9-202ENST00000421939 CORO1AP31146 461 aaKnown RBP27.62■■■□□ 2.01
CDK9-202ENST00000421939 CLCN1P35523 988 aa27.62■■■□□ 2.01
CDK9-202ENST00000421939 MRE11P49959 708 aa27.62■■■□□ 2.01
CDK9-202ENST00000421939 PDCLQ13371 301 aa27.62■■■□□ 2.01
CDK9-202ENST00000421939 PKN3Q6P5Z2 889 aa27.62■■■□□ 2.01
CDK9-202ENST00000421939 SLC47A2Q86VL8 602 aa27.62■■■□□ 2.01
CDK9-202ENST00000421939 TMEM25Q86YD3 366 aa27.62■■■□□ 2.01
CDK9-202ENST00000421939 FMNL3Q8IVF7 1028 aa27.62■■■□□ 2.01
CDK9-202ENST00000421939 PLD4Q96BZ4 506 aa27.62■■■□□ 2.01
CDK9-202ENST00000421939 BPIFA3Q9BQP9 254 aa27.62■■■□□ 2.01
CDK9-202ENST00000421939 SLC4A5Q9BY07 1137 aa27.62■■■□□ 2.01
CDK9-202ENST00000421939 HSD3B7Q9H2F3 369 aa27.62■■■□□ 2.01
CDK9-202ENST00000421939 CYTH4Q9UIA0 394 aa27.62■■■□□ 2.01
CDK9-202ENST00000421939 ZNF510Q9Y2H8 683 aa27.62■■■□□ 2.01
CDK9-202ENST00000421939 PALM2-AKAP2B1ALY0 433 aaPredicted RBP27.61■■■□□ 2.01
CDK9-202ENST00000421939 PAPSS2O95340 614 aaPredicted RBP27.61■■■□□ 2.01
CDK9-202ENST00000421939 TDGF1P13385 188 aa27.61■■■□□ 2.01
CDK9-202ENST00000421939 PTMSP20962 102 aa27.61■■■□□ 2.01
CDK9-202ENST00000421939 BPIFB4P59827 614 aa27.61■■■□□ 2.01
CDK9-202ENST00000421939 ANO4Q32M45 955 aa27.61■■■□□ 2.01
CDK9-202ENST00000421939 MSANTD2Q6P1R3 559 aa27.61■■■□□ 2.01
CDK9-202ENST00000421939 PASD1Q8IV76 773 aa27.61■■■□□ 2.01
CDK9-202ENST00000421939 ETFBKMTQ8IXQ9 262 aa27.61■■■□□ 2.01
CDK9-202ENST00000421939 PNKPQ96T60 521 aa27.61■■■□□ 2.01
CDK9-202ENST00000421939 GANQ9H2C0 597 aa27.61■■■□□ 2.01
CDK9-202ENST00000421939 HBS1LQ9Y450 684 aaKnown RBP27.61■■■□□ 2.01
CDK9-202ENST00000421939 FANCMQ8IYD8 2048 aa27.6■■■□□ 2.01
CDK9-202ENST00000421939 KIAA1549LQ6ZVL6 1849 aa27.6■■■□□ 2.01
CDK9-202ENST00000421939 E5RJQ4 531 aa27.6■■■□□ 2.01
CDK9-202ENST00000421939 CDK11BP21127 795 aaKnown RBP27.6■■■□□ 2.01
CDK9-202ENST00000421939 HOXD11P31277 338 aaPredicted RBP27.6■■■□□ 2.01
CDK9-202ENST00000421939 SLC6A11P48066 632 aa27.6■■■□□ 2.01
CDK9-202ENST00000421939 SCUBE3Q8IX30 993 aa27.6■■■□□ 2.01
CDK9-202ENST00000421939 NELL1Q92832 810 aa27.6■■■□□ 2.01
CDK9-202ENST00000421939 FAM126AQ9BYI3 521 aaPredicted RBP27.6■■■□□ 2.01
CDK9-202ENST00000421939 C2orf42Q9NWW7 574 aa27.6■■■□□ 2.01
CDK9-202ENST00000421939 ZSCAN32Q9NX65 697 aa27.6■■■□□ 2.01
CDK9-202ENST00000421939 MARK1Q9P0L2 795 aa27.6■■■□□ 2.01
CDK9-202ENST00000421939 SFMBT1Q9UHJ3 866 aa27.6■■■□□ 2.01
CDK9-202ENST00000421939 PCDHGA2Q9Y5H1 932 aa27.6■■■□□ 2.01
CDK9-202ENST00000421939 ZFHX2Q9C0A1 2572 aaPredicted RBP27.6■■■□□ 2.01
CDK9-202ENST00000421939 USP34Q70CQ2 3546 aa27.6■■■□□ 2.01
CDK9-202ENST00000421939 CHURC1-FNTBB4DL54 471 aa27.59■■■□□ 2.01
CDK9-202ENST00000421939 F8VZ95 297 aa27.59■■■□□ 2.01
CDK9-202ENST00000421939 ATG13O75143 517 aa27.59■■■□□ 2.01
CDK9-202ENST00000421939 KRT9P35527 623 aa27.59■■■□□ 2.01
CDK9-202ENST00000421939 KLK7P49862 253 aa27.59■■■□□ 2.01
CDK9-202ENST00000421939 KDSRQ06136 332 aa27.59■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms