RNA–Protein interactions for RNA: ENST00000420746.1

TRIM39-206, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 708 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-206ENST00000420746 ACO1P21399 889 aaKnown RBP9.59□□□□□ -0.87
TRIM39-206ENST00000420746 PCSK1P29120 753 aa9.59□□□□□ -0.87
TRIM39-206ENST00000420746 RXRGP48443 463 aa9.59□□□□□ -0.87
TRIM39-206ENST00000420746 DGKGP49619 791 aa9.59□□□□□ -0.87
TRIM39-206ENST00000420746 BCAT1P54687 386 aa9.59□□□□□ -0.87
TRIM39-206ENST00000420746 USP46P62068 366 aa9.59□□□□□ -0.87
TRIM39-206ENST00000420746 POU5F1Q01860 360 aaKnown RBP9.59□□□□□ -0.87
TRIM39-206ENST00000420746 KRTAP21-3Q3LHN1 58 aa9.59□□□□□ -0.87
TRIM39-206ENST00000420746 FAM171BQ6P995 826 aa9.59□□□□□ -0.87
TRIM39-206ENST00000420746 BBS7Q8IWZ6 715 aa9.59□□□□□ -0.87
TRIM39-206ENST00000420746 OXR1Q8N573 874 aa9.59□□□□□ -0.87
TRIM39-206ENST00000420746 OVCA2Q8WZ82 227 aa9.59□□□□□ -0.87
TRIM39-206ENST00000420746 KCNB2Q92953 911 aa9.59□□□□□ -0.87
TRIM39-206ENST00000420746 GRAMD1AQ96CP6 724 aa9.59□□□□□ -0.87
TRIM39-206ENST00000420746 SLITRK1Q96PX8 696 aa9.59□□□□□ -0.87
TRIM39-206ENST00000420746 ARHGAP9Q9BRR9 750 aa9.59□□□□□ -0.87
TRIM39-206ENST00000420746 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.59□□□□□ -0.87
TRIM39-206ENST00000420746 LRRC4CQ9HCJ2 640 aa9.59□□□□□ -0.87
TRIM39-206ENST00000420746 THAP10Q9P2Z0 257 aaPredicted RBP9.59□□□□□ -0.87
TRIM39-206ENST00000420746 CPSF3Q9UKF6 684 aaKnown RBP9.59□□□□□ -0.87
TRIM39-206ENST00000420746 LRBAP50851 2863 aa9.59□□□□□ -0.87
TRIM39-206ENST00000420746 BLACEA4D250 179 aa9.58□□□□□ -0.88
TRIM39-206ENST00000420746 NEDD8-MDP1E9PL57 170 aa9.58□□□□□ -0.88
TRIM39-206ENST00000420746 USP12O75317 370 aa9.58□□□□□ -0.88
TRIM39-206ENST00000420746 SEMA4FO95754 770 aa9.58□□□□□ -0.88
TRIM39-206ENST00000420746 CISD3P0C7P0 127 aa9.58□□□□□ -0.88
TRIM39-206ENST00000420746 SCP2P22307 547 aa9.58□□□□□ -0.88
TRIM39-206ENST00000420746 RPS6KB1P23443 525 aa9.58□□□□□ -0.88
TRIM39-206ENST00000420746 ANXA13P27216 316 aa9.58□□□□□ -0.88
TRIM39-206ENST00000420746 ACSL1P33121 698 aa9.58□□□□□ -0.88
TRIM39-206ENST00000420746 MLLT3P42568 568 aaPredicted RBP9.58□□□□□ -0.88
TRIM39-206ENST00000420746 LHX1P48742 406 aa9.58□□□□□ -0.88
TRIM39-206ENST00000420746 TUBP50607 506 aa9.58□□□□□ -0.88
TRIM39-206ENST00000420746 SMTNP53814 917 aa9.58□□□□□ -0.88
TRIM39-206ENST00000420746 MAPRE1Q15691 268 aaKnown RBP9.58□□□□□ -0.88
TRIM39-206ENST00000420746 PROX2Q3B8N5 592 aa9.58□□□□□ -0.88
TRIM39-206ENST00000420746 PDZD8Q8NEN9 1154 aa9.58□□□□□ -0.88
TRIM39-206ENST00000420746 ZNF274Q96GC6 653 aaPredicted RBP9.58□□□□□ -0.88
TRIM39-206ENST00000420746 JAKMIP1Q96N16 626 aaKnown RBP9.58□□□□□ -0.88
TRIM39-206ENST00000420746 CCNL2Q96S94 520 aaPredicted RBP9.58□□□□□ -0.88
TRIM39-206ENST00000420746 BBS2Q9BXC9 721 aa9.58□□□□□ -0.88
TRIM39-206ENST00000420746 BTBD1Q9H0C5 482 aa9.58□□□□□ -0.88
TRIM39-206ENST00000420746 ERVMER34-1Q9H9K5 563 aa9.58□□□□□ -0.88
TRIM39-206ENST00000420746 BRMS1Q9HCU9 246 aa9.58□□□□□ -0.88
TRIM39-206ENST00000420746 DPP3Q9NY33 737 aa9.58□□□□□ -0.88
TRIM39-206ENST00000420746 FBXO10Q9UK96 956 aa9.58□□□□□ -0.88
TRIM39-206ENST00000420746 L1RE1Q9UN81 338 aa9.58□□□□□ -0.88
TRIM39-206ENST00000420746 SLC27A6Q9Y2P4 619 aa9.58□□□□□ -0.88
TRIM39-206ENST00000420746 MYOFQ9NZM1 2061 aa9.58□□□□□ -0.88
TRIM39-206ENST00000420746 SPTBN1Q01082 2364 aaKnown RBP9.57□□□□□ -0.88
TRIM39-206ENST00000420746 SCN1AP35498 2009 aa9.57□□□□□ -0.88
TRIM39-206ENST00000420746 A0A0B4J269 797 aa9.57□□□□□ -0.88
TRIM39-206ENST00000420746 A0A1W2PPC4 97 aa9.57□□□□□ -0.88
TRIM39-206ENST00000420746 GABRDO14764 452 aa9.57□□□□□ -0.88
TRIM39-206ENST00000420746 COCHO43405 550 aa9.57□□□□□ -0.88
TRIM39-206ENST00000420746 HUS1O60921 280 aa9.57□□□□□ -0.88
TRIM39-206ENST00000420746 CDKL5O76039 1030 aa9.57□□□□□ -0.88
TRIM39-206ENST00000420746 PIGRP01833 764 aa9.57□□□□□ -0.88
TRIM39-206ENST00000420746 PLS3P13797 630 aa9.57□□□□□ -0.88
TRIM39-206ENST00000420746 ACAT1P24752 427 aaKnown RBP9.57□□□□□ -0.88
TRIM39-206ENST00000420746 KRT2P35908 639 aa9.57□□□□□ -0.88
TRIM39-206ENST00000420746 ZBTB16Q05516 673 aa9.57□□□□□ -0.88
TRIM39-206ENST00000420746 TAF10Q12962 218 aa9.57□□□□□ -0.88
TRIM39-206ENST00000420746 NR5A1Q13285 461 aa9.57□□□□□ -0.88
TRIM39-206ENST00000420746 CLN3Q13286 438 aa9.57□□□□□ -0.88
TRIM39-206ENST00000420746 SNX30Q5VWJ9 437 aa9.57□□□□□ -0.88
TRIM39-206ENST00000420746 TDRD10Q5VZ19 366 aaKnown RBP9.57□□□□□ -0.88
TRIM39-206ENST00000420746 NT5DC4Q86YG4 428 aa9.57□□□□□ -0.88
TRIM39-206ENST00000420746 OR2T3Q8NH03 318 aa9.57□□□□□ -0.88
TRIM39-206ENST00000420746 UCMAQ8WVF2 138 aa9.57□□□□□ -0.88
TRIM39-206ENST00000420746 FAM212AQ96EL1 285 aa9.57□□□□□ -0.88
TRIM39-206ENST00000420746 BICD1Q96G01 975 aa9.57□□□□□ -0.88
TRIM39-206ENST00000420746 C8orf48Q96LL4 319 aa9.57□□□□□ -0.88
TRIM39-206ENST00000420746 SLC46A1Q96NT5 459 aa9.57□□□□□ -0.88
TRIM39-206ENST00000420746 SLC25A18Q9H1K4 315 aa9.57□□□□□ -0.88
TRIM39-206ENST00000420746 LHX5Q9H2C1 402 aa9.57□□□□□ -0.88
TRIM39-206ENST00000420746 TMEM60Q9H2L4 133 aa9.57□□□□□ -0.88
TRIM39-206ENST00000420746 SGK2Q9HBY8 427 aa9.57□□□□□ -0.88
TRIM39-206ENST00000420746 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.57□□□□□ -0.88
TRIM39-206ENST00000420746 GDF3Q9NR23 364 aa9.57□□□□□ -0.88
TRIM39-206ENST00000420746 MAGEC2Q9UBF1 373 aaPredicted RBP9.57□□□□□ -0.88
TRIM39-206ENST00000420746 ATXN7L1Q9ULK2 861 aaPredicted RBP9.57□□□□□ -0.88
TRIM39-206ENST00000420746 PCDHGA8Q9Y5G5 932 aa9.57□□□□□ -0.88
TRIM39-206ENST00000420746 CDRT15L2A8MXV6 281 aa9.56□□□□□ -0.88
TRIM39-206ENST00000420746 WNT7AO00755 349 aa9.56□□□□□ -0.88
TRIM39-206ENST00000420746 FSBPO95073 299 aa9.56□□□□□ -0.88
TRIM39-206ENST00000420746 ABL1P00519 1130 aa9.56□□□□□ -0.88
TRIM39-206ENST00000420746 IGHV4-34P06331 123 aa9.56□□□□□ -0.88
TRIM39-206ENST00000420746 OR52Z1P0C646 297 aa9.56□□□□□ -0.88
TRIM39-206ENST00000420746 POU3F2P20265 443 aaPredicted RBP9.56□□□□□ -0.88
TRIM39-206ENST00000420746 GUCY2CP25092 1073 aa9.56□□□□□ -0.88
TRIM39-206ENST00000420746 RBMS1P29558 406 aaKnown RBP9.56□□□□□ -0.88
TRIM39-206ENST00000420746 LIG4P49917 911 aa9.56□□□□□ -0.88
TRIM39-206ENST00000420746 CDH8P55286 799 aa9.56□□□□□ -0.88
TRIM39-206ENST00000420746 EIF4HQ15056 248 aaKnown RBP9.56□□□□□ -0.88
TRIM39-206ENST00000420746 ECM1Q16610 540 aa9.56□□□□□ -0.88
TRIM39-206ENST00000420746 RINT1Q6NUQ1 792 aa9.56□□□□□ -0.88
TRIM39-206ENST00000420746 C1orf186Q6ZWK4 172 aa9.56□□□□□ -0.88
TRIM39-206ENST00000420746 HTR3DQ70Z44 454 aa9.56□□□□□ -0.88
TRIM39-206ENST00000420746 CLEC14AQ86T13 490 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms