RNA–Protein interactions for RNA: ENST00000418212.5

BDNF-208, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-208ENST00000418212 ERMARDQ5T6L9 678 aa13.65□□□□□ -0.22
BDNF-208ENST00000418212 C3orf20Q8ND61 904 aa13.65□□□□□ -0.22
BDNF-208ENST00000418212 LPPQ93052 612 aa13.65□□□□□ -0.22
BDNF-208ENST00000418212 VCPIP1Q96JH7 1222 aa13.65□□□□□ -0.22
BDNF-208ENST00000418212 PWWP2AQ96N64 755 aa13.65□□□□□ -0.22
BDNF-208ENST00000418212 TSPYL2Q9H2G4 693 aaPredicted RBP13.65□□□□□ -0.22
BDNF-208ENST00000418212 PCDH9Q9HC56 1237 aa13.65□□□□□ -0.22
BDNF-208ENST00000418212 CD274Q9NZQ7 290 aa13.65□□□□□ -0.22
BDNF-208ENST00000418212 MROH7Q68CQ1 1323 aa13.65□□□□□ -0.22
BDNF-208ENST00000418212 F5H5T6 163 aa13.65□□□□□ -0.22
BDNF-208ENST00000418212 SLC2A3P11169 496 aa13.65□□□□□ -0.22
BDNF-208ENST00000418212 AP2B1P63010 937 aa13.65□□□□□ -0.22
BDNF-208ENST00000418212 HSP90AA5PQ58FG0 334 aa13.65□□□□□ -0.22
BDNF-208ENST00000418212 RIBC1Q8N443 379 aaPredicted RBP13.65□□□□□ -0.22
BDNF-208ENST00000418212 CALML6Q8TD86 181 aa13.65□□□□□ -0.22
BDNF-208ENST00000418212 DDI1Q8WTU0 396 aa13.65□□□□□ -0.22
BDNF-208ENST00000418212 ALG3Q92685 438 aa13.65□□□□□ -0.22
BDNF-208ENST00000418212 CINPQ9BW66 212 aaPredicted RBP13.65□□□□□ -0.22
BDNF-208ENST00000418212 ING2Q9H160 280 aa13.65□□□□□ -0.22
BDNF-208ENST00000418212 MTIF3Q9H2K0 278 aaKnown RBP13.65□□□□□ -0.22
BDNF-208ENST00000418212 NOD2Q9HC29 1040 aa13.65□□□□□ -0.22
BDNF-208ENST00000418212 TRIM17Q9Y577 477 aa13.65□□□□□ -0.22
BDNF-208ENST00000418212 TBKBP1A7MCY6 615 aa13.65□□□□□ -0.22
BDNF-208ENST00000418212 IGF2BP3O00425 579 aaKnown RBP eCLIP13.65□□□□□ -0.22
BDNF-208ENST00000418212 ANGPT2O15123 496 aa13.65□□□□□ -0.22
BDNF-208ENST00000418212 PSMD3O43242 534 aa13.65□□□□□ -0.22
BDNF-208ENST00000418212 ZNF862O60290 1169 aa13.65□□□□□ -0.22
BDNF-208ENST00000418212 MAFO75444 373 aaPredicted RBP13.65□□□□□ -0.22
BDNF-208ENST00000418212 LRG1P02750 347 aa13.65□□□□□ -0.22
BDNF-208ENST00000418212 HMGCRP04035 888 aa13.65□□□□□ -0.22
BDNF-208ENST00000418212 FDFT1P37268 417 aa13.65□□□□□ -0.22
BDNF-208ENST00000418212 ZNF280DQ6N043 979 aa13.65□□□□□ -0.22
BDNF-208ENST00000418212 STRA8Q7Z7C7 330 aa13.65□□□□□ -0.22
BDNF-208ENST00000418212 SLC4A7Q9Y6M7 1214 aa13.65□□□□□ -0.22
BDNF-208ENST00000418212 ZNF541Q9H0D2 1346 aa13.65□□□□□ -0.22
BDNF-208ENST00000418212 ARF4P18085 180 aaPredicted RBP13.64□□□□□ -0.23
BDNF-208ENST00000418212 ILDR2Q71H61 639 aa13.64□□□□□ -0.23
BDNF-208ENST00000418212 SLC9A9Q8IVB4 645 aa13.64□□□□□ -0.23
BDNF-208ENST00000418212 YAF2Q8IY57 180 aa13.64□□□□□ -0.23
BDNF-208ENST00000418212 TSPAN17Q96FV3 270 aa13.64□□□□□ -0.23
BDNF-208ENST00000418212 FRMD8Q9BZ67 464 aaPredicted RBP13.64□□□□□ -0.23
BDNF-208ENST00000418212 LRRC40Q9H9A6 602 aa13.64□□□□□ -0.23
BDNF-208ENST00000418212 AVENQ9NQS1 362 aaPredicted RBP13.64□□□□□ -0.23
BDNF-208ENST00000418212 NCF1BA6NI72 391 aaPredicted RBP13.64□□□□□ -0.23
BDNF-208ENST00000418212 NCF1CA8MVU1 366 aaPredicted RBP13.64□□□□□ -0.23
BDNF-208ENST00000418212 RIPK2O43353 540 aa13.64□□□□□ -0.23
BDNF-208ENST00000418212 SNUPNO95149 360 aaKnown RBP13.64□□□□□ -0.23
BDNF-208ENST00000418212 NCF1P14598 390 aaPredicted RBP13.64□□□□□ -0.23
BDNF-208ENST00000418212 RPL10AP62906 217 aaKnown RBP13.64□□□□□ -0.23
BDNF-208ENST00000418212 DDX39BQ13838 428 aaKnown RBP13.64□□□□□ -0.23
BDNF-208ENST00000418212 LBX2Q6XYB7 198 aa13.64□□□□□ -0.23
BDNF-208ENST00000418212 GPR142Q7Z601 462 aa13.64□□□□□ -0.23
BDNF-208ENST00000418212 PRPF39Q86UA1 669 aaKnown RBP13.64□□□□□ -0.23
BDNF-208ENST00000418212 PALB2Q86YC2 1186 aa13.64□□□□□ -0.23
BDNF-208ENST00000418212 BSNDQ8WZ55 320 aa13.64□□□□□ -0.23
BDNF-208ENST00000418212 SEPT8Q92599 483 aa13.64□□□□□ -0.23
BDNF-208ENST00000418212 RNF208Q9H0X6 261 aa13.64□□□□□ -0.23
BDNF-208ENST00000418212 TRPM5Q9NZQ8 1165 aa13.64□□□□□ -0.23
BDNF-208ENST00000418212 VPS28Q9UK41 221 aa13.64□□□□□ -0.23
BDNF-208ENST00000418212 TPST1O60507 370 aa13.64□□□□□ -0.23
BDNF-208ENST00000418212 FSBPO95073 299 aa13.64□□□□□ -0.23
BDNF-208ENST00000418212 PYGLP06737 847 aa13.64□□□□□ -0.23
BDNF-208ENST00000418212 AARSP49588 968 aaKnown RBP eCLIP13.64□□□□□ -0.23
BDNF-208ENST00000418212 ZNF844Q08AG5 666 aa13.64□□□□□ -0.23
BDNF-208ENST00000418212 MAMLD1Q13495 774 aa13.64□□□□□ -0.23
BDNF-208ENST00000418212 BFSP2Q13515 415 aa13.64□□□□□ -0.23
BDNF-208ENST00000418212 MFSD4BQ5TF39 518 aa13.64□□□□□ -0.23
BDNF-208ENST00000418212 PTAR1Q7Z6K3 402 aaPredicted RBP13.64□□□□□ -0.23
BDNF-208ENST00000418212 SLC26A11Q86WA9 606 aa13.64□□□□□ -0.23
BDNF-208ENST00000418212 MRPS31Q92665 395 aaKnown RBP13.64□□□□□ -0.23
BDNF-208ENST00000418212 ACO2Q99798 780 aaKnown RBP13.64□□□□□ -0.23
BDNF-208ENST00000418212 FICDQ9BVA6 458 aa13.64□□□□□ -0.23
BDNF-208ENST00000418212 OSBPL1AQ9BXW6 950 aa13.64□□□□□ -0.23
BDNF-208ENST00000418212 CCDC90BQ9GZT6 254 aa13.64□□□□□ -0.23
BDNF-208ENST00000418212 PPCSQ9HAB8 311 aa13.64□□□□□ -0.23
BDNF-208ENST00000418212 WARS2Q9UGM6 360 aaKnown RBP13.64□□□□□ -0.23
BDNF-208ENST00000418212 CRLS1Q9UJA2 301 aa13.64□□□□□ -0.23
BDNF-208ENST00000418212 V9GYQ6 96 aa13.64□□□□□ -0.23
BDNF-208ENST00000418212 NFASCO94856 1347 aa13.64□□□□□ -0.23
BDNF-208ENST00000418212 CCR1P32246 355 aa13.63□□□□□ -0.23
BDNF-208ENST00000418212 NLRP9Q7RTR0 991 aa13.63□□□□□ -0.23
BDNF-208ENST00000418212 PIGZQ86VD9 579 aa13.63□□□□□ -0.23
BDNF-208ENST00000418212 PGBD3Q8N328 593 aa13.63□□□□□ -0.23
BDNF-208ENST00000418212 CXorf38Q8TB03 319 aa13.63□□□□□ -0.23
BDNF-208ENST00000418212 KREMEN1Q96MU8 473 aa13.63□□□□□ -0.23
BDNF-208ENST00000418212 TMEM134Q9H6X4 195 aa13.63□□□□□ -0.23
BDNF-208ENST00000418212 RUBCNLQ9H714 662 aa13.63□□□□□ -0.23
BDNF-208ENST00000418212 GOLGA2P5Q9HBQ8 144 aa13.63□□□□□ -0.23
BDNF-208ENST00000418212 CTNNAL1Q9UBT7 734 aa13.63□□□□□ -0.23
BDNF-208ENST00000418212 HAO1Q9UJM8 370 aa13.63□□□□□ -0.23
BDNF-208ENST00000418212 MED1Q15648 1581 aaPredicted RBP13.63□□□□□ -0.23
BDNF-208ENST00000418212 DNALI1O14645 258 aaPredicted RBP13.63□□□□□ -0.23
BDNF-208ENST00000418212 LMNAP02545 664 aaKnown RBP13.63□□□□□ -0.23
BDNF-208ENST00000418212 MPP3Q13368 585 aa13.63□□□□□ -0.23
BDNF-208ENST00000418212 FAM83EQ2M2I3 478 aa13.63□□□□□ -0.23
BDNF-208ENST00000418212 CAVIN3Q969G5 261 aa13.63□□□□□ -0.23
BDNF-208ENST00000418212 PCDHGB4Q9UN71 923 aa13.63□□□□□ -0.23
BDNF-208ENST00000418212 TNFSF13BQ9Y275 285 aa13.63□□□□□ -0.23
BDNF-208ENST00000418212 FARP2O94887 1054 aaPredicted RBP13.63□□□□□ -0.23
BDNF-208ENST00000418212 YBX3P16989 372 aaKnown RBP eCLIP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms