RNA–Protein interactions for RNA: ENST00000417540.5

HDLBP-206, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-206ENST00000417540 ZBED1O96006 694 aa10.72□□□□□ -0.69
HDLBP-206ENST00000417540 PAEPP09466 180 aa10.72□□□□□ -0.69
HDLBP-206ENST00000417540 ATP1A3P13637 1013 aa10.72□□□□□ -0.69
HDLBP-206ENST00000417540 PFKLP17858 780 aa10.72□□□□□ -0.69
HDLBP-206ENST00000417540 MAGEA9P43362 315 aa10.72□□□□□ -0.69
HDLBP-206ENST00000417540 PPP3CCP48454 512 aa10.72□□□□□ -0.69
HDLBP-206ENST00000417540 NUMBP49757 651 aa10.72□□□□□ -0.69
HDLBP-206ENST00000417540 TYRO3Q06418 890 aa10.72□□□□□ -0.69
HDLBP-206ENST00000417540 PDCLQ13371 301 aa10.72□□□□□ -0.69
HDLBP-206ENST00000417540 NCAPHQ15003 741 aa10.72□□□□□ -0.69
HDLBP-206ENST00000417540 STX1AQ16623 288 aa10.72□□□□□ -0.69
HDLBP-206ENST00000417540 VWA3BQ502W6 1294 aa10.72□□□□□ -0.69
HDLBP-206ENST00000417540 EMC10Q5UCC4 262 aa10.72□□□□□ -0.69
HDLBP-206ENST00000417540 OTUD1Q5VV17 481 aaPredicted RBP10.72□□□□□ -0.69
HDLBP-206ENST00000417540 CAVIN1Q6NZI2 390 aaKnown RBP10.72□□□□□ -0.69
HDLBP-206ENST00000417540 GBP6Q6ZN66 633 aa10.72□□□□□ -0.69
HDLBP-206ENST00000417540 TAC4Q86UU9 113 aa10.72□□□□□ -0.69
HDLBP-206ENST00000417540 FMNL3Q8IVF7 1028 aa10.72□□□□□ -0.69
HDLBP-206ENST00000417540 SIX6OS1Q8N1H7 587 aa10.72□□□□□ -0.69
HDLBP-206ENST00000417540 DCLK2Q8N568 766 aa10.72□□□□□ -0.69
HDLBP-206ENST00000417540 ADAM32Q8TC27 787 aa10.72□□□□□ -0.69
HDLBP-206ENST00000417540 PRICKLE1Q96MT3 831 aaPredicted RBP10.72□□□□□ -0.69
HDLBP-206ENST00000417540 TUBGCP2Q9BSJ2 902 aa10.72□□□□□ -0.69
HDLBP-206ENST00000417540 ADAM33Q9BZ11 813 aa10.72□□□□□ -0.69
HDLBP-206ENST00000417540 CD93Q9NPY3 652 aa10.72□□□□□ -0.69
HDLBP-206ENST00000417540 COMMD8Q9NX08 183 aa10.72□□□□□ -0.69
HDLBP-206ENST00000417540 HESX1Q9UBX0 185 aa10.72□□□□□ -0.69
HDLBP-206ENST00000417540 CNTN6Q9UQ52 1028 aa10.72□□□□□ -0.69
HDLBP-206ENST00000417540 CEP192Q8TEP8 1941 aa10.72□□□□□ -0.69
HDLBP-206ENST00000417540 NUP205Q92621 2012 aa10.72□□□□□ -0.69
HDLBP-206ENST00000417540 RIF1Q5UIP0 2472 aaKnown RBP10.72□□□□□ -0.69
HDLBP-206ENST00000417540 E2F8A0AVK6 867 aa10.71□□□□□ -0.69
HDLBP-206ENST00000417540 HOXC11O43248 304 aaPredicted RBP10.71□□□□□ -0.69
HDLBP-206ENST00000417540 PAPSS1O43252 624 aaPredicted RBP10.71□□□□□ -0.69
HDLBP-206ENST00000417540 LILRB5O75023 590 aa10.71□□□□□ -0.69
HDLBP-206ENST00000417540 FYNP06241 537 aa10.71□□□□□ -0.69
HDLBP-206ENST00000417540 GGCXP38435 758 aa10.71□□□□□ -0.69
HDLBP-206ENST00000417540 USP8P40818 1118 aa10.71□□□□□ -0.69
HDLBP-206ENST00000417540 CCR3P51677 355 aa10.71□□□□□ -0.69
HDLBP-206ENST00000417540 GRSF1Q12849 480 aaKnown RBP eCLIP10.71□□□□□ -0.69
HDLBP-206ENST00000417540 RAPGEF1Q13905 1077 aa10.71□□□□□ -0.69
HDLBP-206ENST00000417540 ANO4Q32M45 955 aa10.71□□□□□ -0.69
HDLBP-206ENST00000417540 PTPN20Q4JDL3 420 aa10.71□□□□□ -0.69
HDLBP-206ENST00000417540 TCP11X2Q5H9J9 407 aa10.71□□□□□ -0.69
HDLBP-206ENST00000417540 TAF3Q5VWG9 929 aa10.71□□□□□ -0.69
HDLBP-206ENST00000417540 EGFLAMQ63HQ2 1017 aa10.71□□□□□ -0.69
HDLBP-206ENST00000417540 RALGAPA1Q6GYQ0 2036 aa10.71□□□□□ -0.69
HDLBP-206ENST00000417540 APTXQ7Z2E3 356 aaKnown RBP10.71□□□□□ -0.69
HDLBP-206ENST00000417540 SLC47A2Q86VL8 602 aa10.71□□□□□ -0.69
HDLBP-206ENST00000417540 DDX42Q86XP3 938 aaKnown RBP eCLIP10.71□□□□□ -0.69
HDLBP-206ENST00000417540 TTC39CQ8N584 583 aa10.71□□□□□ -0.69
HDLBP-206ENST00000417540 CCDC33Q8N5R6 958 aa10.71□□□□□ -0.69
HDLBP-206ENST00000417540 SUMF1Q8NBK3 374 aa10.71□□□□□ -0.69
HDLBP-206ENST00000417540 ZBTB44Q8NCP5 570 aa10.71□□□□□ -0.69
HDLBP-206ENST00000417540 WFDC5Q8TCV5 224 aa10.71□□□□□ -0.69
HDLBP-206ENST00000417540 DQX1Q8TE96 717 aaKnown RBP10.71□□□□□ -0.69
HDLBP-206ENST00000417540 SLC35F5Q8WV83 523 aa10.71□□□□□ -0.69
HDLBP-206ENST00000417540 NKD2Q969F2 451 aaPredicted RBP10.71□□□□□ -0.69
HDLBP-206ENST00000417540 CPXM1Q96SM3 734 aa10.71□□□□□ -0.69
HDLBP-206ENST00000417540 TPSD1Q9BZJ3 242 aa10.71□□□□□ -0.69
HDLBP-206ENST00000417540 VPS16Q9H269 839 aa10.71□□□□□ -0.69
HDLBP-206ENST00000417540 NDST4Q9H3R1 872 aa10.71□□□□□ -0.69
HDLBP-206ENST00000417540 LRRC4Q9HBW1 653 aa10.71□□□□□ -0.69
HDLBP-206ENST00000417540 SPHK2Q9NRA0 654 aa10.71□□□□□ -0.69
HDLBP-206ENST00000417540 MARCH2Q9P0N8 246 aa10.71□□□□□ -0.69
HDLBP-206ENST00000417540 XPO7Q9UIA9 1087 aaKnown RBP10.71□□□□□ -0.69
HDLBP-206ENST00000417540 DNAJC12Q9UKB3 198 aa10.71□□□□□ -0.69
HDLBP-206ENST00000417540 FBXO4Q9UKT5 387 aa10.71□□□□□ -0.69
HDLBP-206ENST00000417540 SGK1O00141 431 aa10.7□□□□□ -0.7
HDLBP-206ENST00000417540 ADAM23O75077 832 aa10.7□□□□□ -0.7
HDLBP-206ENST00000417540 TULP3O75386 442 aa10.7□□□□□ -0.7
HDLBP-206ENST00000417540 ADH1CP00326 375 aa10.7□□□□□ -0.7
HDLBP-206ENST00000417540 ERBB2P04626 1255 aa10.7□□□□□ -0.7
HDLBP-206ENST00000417540 TYRP14679 529 aa10.7□□□□□ -0.7
HDLBP-206ENST00000417540 TRIM21P19474 475 aaKnown RBP10.7□□□□□ -0.7
HDLBP-206ENST00000417540 ERCC5P28715 1186 aaPredicted RBP10.7□□□□□ -0.7
HDLBP-206ENST00000417540 TIE1P35590 1138 aa10.7□□□□□ -0.7
HDLBP-206ENST00000417540 ATP5C1P36542 298 aaKnown RBP10.7□□□□□ -0.7
HDLBP-206ENST00000417540 WASP42768 502 aa10.7□□□□□ -0.7
HDLBP-206ENST00000417540 GPD2P43304 727 aa10.7□□□□□ -0.7
HDLBP-206ENST00000417540 MLLT6P55198 1093 aaPredicted RBP10.7□□□□□ -0.7
HDLBP-206ENST00000417540 CETN1Q12798 172 aa10.7□□□□□ -0.7
HDLBP-206ENST00000417540 TAF5Q15542 800 aa10.7□□□□□ -0.7
HDLBP-206ENST00000417540 ANO6Q4KMQ2 910 aa10.7□□□□□ -0.7
HDLBP-206ENST00000417540 C2CD6Q53TS8 623 aa10.7□□□□□ -0.7
HDLBP-206ENST00000417540 C2orf27AQ580R0 203 aa10.7□□□□□ -0.7
HDLBP-206ENST00000417540 DGKKQ5KSL6 1271 aa10.7□□□□□ -0.7
HDLBP-206ENST00000417540 FYB2Q5VWT5 728 aa10.7□□□□□ -0.7
HDLBP-206ENST00000417540 PM20D1Q6GTS8 502 aa10.7□□□□□ -0.7
HDLBP-206ENST00000417540 TMEM92Q6UXU6 159 aa10.7□□□□□ -0.7
HDLBP-206ENST00000417540 FAM183BPQ6ZVS7 135 aa10.7□□□□□ -0.7
HDLBP-206ENST00000417540 RSRC2Q7L4I2 434 aaKnown RBP10.7□□□□□ -0.7
HDLBP-206ENST00000417540 DENND1CQ8IV53 801 aa10.7□□□□□ -0.7
HDLBP-206ENST00000417540 SPEM1Q8N4L4 309 aa10.7□□□□□ -0.7
HDLBP-206ENST00000417540 ALLCQ8N6M5 410 aa10.7□□□□□ -0.7
HDLBP-206ENST00000417540 TERB1Q8NA31 727 aa10.7□□□□□ -0.7
HDLBP-206ENST00000417540 USP33Q8TEY7 942 aa10.7□□□□□ -0.7
HDLBP-206ENST00000417540 SLC20A1Q8WUM9 679 aa10.7□□□□□ -0.7
HDLBP-206ENST00000417540 ACOX2Q99424 681 aa10.7□□□□□ -0.7
HDLBP-206ENST00000417540 FUCA2Q9BTY2 467 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms