RNA–Protein interactions for RNA: ENST00000417300.1

GABRE-202, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 2

Gene GABRE, Length 619 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-202ENST00000417300 PCDHB5Q9Y5E4 795 aa12.42□□□□□ -0.42
GABRE-202ENST00000417300 MTMR11A4FU01 709 aa12.41□□□□□ -0.42
GABRE-202ENST00000417300 TRIM66O15016 1216 aa12.41□□□□□ -0.42
GABRE-202ENST00000417300 LRCH4O75427 683 aa12.41□□□□□ -0.42
GABRE-202ENST00000417300 RNF8O76064 485 aa12.41□□□□□ -0.42
GABRE-202ENST00000417300 LINC00271P0C7V0 271 aa12.41□□□□□ -0.42
GABRE-202ENST00000417300 PDGFRAP16234 1089 aa12.41□□□□□ -0.42
GABRE-202ENST00000417300 DESP17661 470 aa12.41□□□□□ -0.42
GABRE-202ENST00000417300 SDC4P31431 198 aa12.41□□□□□ -0.42
GABRE-202ENST00000417300 DSG1Q02413 1049 aa12.41□□□□□ -0.42
GABRE-202ENST00000417300 SLC25A11Q02978 314 aaKnown RBP12.41□□□□□ -0.42
GABRE-202ENST00000417300 TAF5Q15542 800 aa12.41□□□□□ -0.42
GABRE-202ENST00000417300 PSMD5Q16401 504 aa12.41□□□□□ -0.42
GABRE-202ENST00000417300 SEL1L2Q5TEA6 688 aa12.41□□□□□ -0.42
GABRE-202ENST00000417300 GPRIN1Q7Z2K8 1008 aa12.41□□□□□ -0.42
GABRE-202ENST00000417300 DDX53Q86TM3 631 aaKnown RBP12.41□□□□□ -0.42
GABRE-202ENST00000417300 FIBCD1Q8N539 461 aa12.41□□□□□ -0.42
GABRE-202ENST00000417300 ARFGAP1Q8N6T3 406 aa12.41□□□□□ -0.42
GABRE-202ENST00000417300 GOLGA1Q92805 767 aa12.41□□□□□ -0.42
GABRE-202ENST00000417300 MS4A14Q96JA4 679 aa12.41□□□□□ -0.42
GABRE-202ENST00000417300 C8orf48Q96LL4 319 aa12.41□□□□□ -0.42
GABRE-202ENST00000417300 NAP1L3Q99457 506 aaPredicted RBP12.41□□□□□ -0.42
GABRE-202ENST00000417300 C11orf84Q9BUA3 381 aaPredicted RBP12.41□□□□□ -0.42
GABRE-202ENST00000417300 DDX23Q9BUQ8 820 aaKnown RBP12.41□□□□□ -0.42
GABRE-202ENST00000417300 SEMA4AQ9H3S1 761 aa12.41□□□□□ -0.42
GABRE-202ENST00000417300 IGFLR1Q9H665 355 aa12.41□□□□□ -0.42
GABRE-202ENST00000417300 ABI2Q9NYB9 513 aaPredicted RBP12.41□□□□□ -0.42
GABRE-202ENST00000417300 EHD2Q9NZN4 543 aa12.41□□□□□ -0.42
GABRE-202ENST00000417300 USP3Q9Y6I4 520 aa12.41□□□□□ -0.42
GABRE-202ENST00000417300 MYO7AQ13402 2215 aa12.41□□□□□ -0.42
GABRE-202ENST00000417300 TNFRSF10BO14763 440 aa12.4□□□□□ -0.42
GABRE-202ENST00000417300 GRAP2O75791 330 aa12.4□□□□□ -0.42
GABRE-202ENST00000417300 ZBED1O96006 694 aa12.4□□□□□ -0.42
GABRE-202ENST00000417300 KRT7P08729 469 aa12.4□□□□□ -0.42
GABRE-202ENST00000417300 PYGMP11217 842 aa12.4□□□□□ -0.42
GABRE-202ENST00000417300 CPB1P15086 417 aa12.4□□□□□ -0.42
GABRE-202ENST00000417300 CYP2F1P24903 491 aa12.4□□□□□ -0.42
GABRE-202ENST00000417300 GLUD2P49448 558 aa12.4□□□□□ -0.42
GABRE-202ENST00000417300 NDUFV1P49821 464 aa12.4□□□□□ -0.42
GABRE-202ENST00000417300 RNASE9P60153 205 aaKnown RBP12.4□□□□□ -0.42
GABRE-202ENST00000417300 HYAL1Q12794 435 aa12.4□□□□□ -0.42
GABRE-202ENST00000417300 HADHQ16836 314 aaKnown RBP12.4□□□□□ -0.42
GABRE-202ENST00000417300 CCDC14Q49A88 953 aa12.4□□□□□ -0.42
GABRE-202ENST00000417300 DAB2IPQ5VWQ8 1189 aa12.4□□□□□ -0.42
GABRE-202ENST00000417300 PM20D1Q6GTS8 502 aa12.4□□□□□ -0.42
GABRE-202ENST00000417300 PRSS55Q6UWB4 352 aaPredicted RBP12.4□□□□□ -0.42
GABRE-202ENST00000417300 RSPO2Q6UXX9 243 aaPredicted RBP12.4□□□□□ -0.42
GABRE-202ENST00000417300 BHLHA9Q7RTU4 235 aa12.4□□□□□ -0.42
GABRE-202ENST00000417300 SPATA4Q8NEY3 305 aa12.4□□□□□ -0.42
GABRE-202ENST00000417300 EXD1Q8NHP7 514 aa12.4□□□□□ -0.42
GABRE-202ENST00000417300 RIN2Q8WYP3 895 aaPredicted RBP12.4□□□□□ -0.42
GABRE-202ENST00000417300 CENPIQ92674 756 aaPredicted RBP12.4□□□□□ -0.42
GABRE-202ENST00000417300 CLP1Q92989 425 aaKnown RBP12.4□□□□□ -0.42
GABRE-202ENST00000417300 SLC2A13Q96QE2 648 aa12.4□□□□□ -0.42
GABRE-202ENST00000417300 DDX56Q9NY93 547 aaKnown RBP12.4□□□□□ -0.42
GABRE-202ENST00000417300 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.4□□□□□ -0.42
GABRE-202ENST00000417300 SMARCAL1Q9NZC9 954 aa12.4□□□□□ -0.42
GABRE-202ENST00000417300 PCDHB12Q9Y5F1 795 aa12.4□□□□□ -0.42
GABRE-202ENST00000417300 MYO16Q9Y6X6 1858 aa12.4□□□□□ -0.42
GABRE-202ENST00000417300 TBX10O75333 385 aa12.39□□□□□ -0.43
GABRE-202ENST00000417300 FGGP02679 453 aa12.39□□□□□ -0.43
GABRE-202ENST00000417300 TCF4P15884 667 aa12.39□□□□□ -0.43
GABRE-202ENST00000417300 SDHBP21912 280 aa12.39□□□□□ -0.43
GABRE-202ENST00000417300 NOS2P35228 1153 aa12.39□□□□□ -0.43
GABRE-202ENST00000417300 GRIK1P39086 918 aa12.39□□□□□ -0.43
GABRE-202ENST00000417300 MATKP42679 507 aa12.39□□□□□ -0.43
GABRE-202ENST00000417300 SSR1P43307 286 aaKnown RBP12.39□□□□□ -0.43
GABRE-202ENST00000417300 SLC5A3P53794 718 aa12.39□□□□□ -0.43
GABRE-202ENST00000417300 YWHAZP63104 245 aaKnown RBP12.39□□□□□ -0.43
GABRE-202ENST00000417300 ROR1Q01973 937 aa12.39□□□□□ -0.43
GABRE-202ENST00000417300 ZNF211Q13398 564 aaPredicted RBP12.39□□□□□ -0.43
GABRE-202ENST00000417300 ASTLQ6HA08 431 aaPredicted RBP12.39□□□□□ -0.43
GABRE-202ENST00000417300 KIAA1841Q6NSI8 718 aa12.39□□□□□ -0.43
GABRE-202ENST00000417300 BEND5Q7L4P6 421 aa12.39□□□□□ -0.43
GABRE-202ENST00000417300 STRADAQ7RTN6 431 aa12.39□□□□□ -0.43
GABRE-202ENST00000417300 BNIPLQ7Z465 357 aa12.39□□□□□ -0.43
GABRE-202ENST00000417300 DEFB106AQ8N104 65 aa12.39□□□□□ -0.43
GABRE-202ENST00000417300 MMGT1Q8N4V1 131 aa12.39□□□□□ -0.43
GABRE-202ENST00000417300 UBXN4Q92575 508 aa12.39□□□□□ -0.43
GABRE-202ENST00000417300 NT5C3BQ969T7 300 aa12.39□□□□□ -0.43
GABRE-202ENST00000417300 FAM149B1Q96BN6 582 aa12.39□□□□□ -0.43
GABRE-202ENST00000417300 RBM41Q96IZ5 413 aaKnown RBP12.39□□□□□ -0.43
GABRE-202ENST00000417300 CEP295NLQ96MC4 621 aa12.39□□□□□ -0.43
GABRE-202ENST00000417300 CFAP57Q96MR6 1250 aa12.39□□□□□ -0.43
GABRE-202ENST00000417300 TRIM62Q9BVG3 475 aa12.39□□□□□ -0.43
GABRE-202ENST00000417300 POPDC2Q9HBU9 364 aa12.39□□□□□ -0.43
GABRE-202ENST00000417300 STAP1Q9ULZ2 295 aa12.39□□□□□ -0.43
GABRE-202ENST00000417300 CDY1Q9Y6F8 540 aa12.39□□□□□ -0.43
GABRE-202ENST00000417300 WDR27A2RRH5 827 aa12.38□□□□□ -0.43
GABRE-202ENST00000417300 YJEFN3A6XGL0 299 aa12.38□□□□□ -0.43
GABRE-202ENST00000417300 E7ENQ6 273 aa12.38□□□□□ -0.43
GABRE-202ENST00000417300 CCDC188H7C350 402 aa12.38□□□□□ -0.43
GABRE-202ENST00000417300 ENDOD1O94919 500 aa12.38□□□□□ -0.43
GABRE-202ENST00000417300 ZRANB2O95218 330 aaKnown RBP eCLIP12.38□□□□□ -0.431e-7■■■■■ 34.2
GABRE-202ENST00000417300 VNN2O95498 520 aa12.38□□□□□ -0.43
GABRE-202ENST00000417300 TRUB2O95900 331 aaKnown RBP12.38□□□□□ -0.43
GABRE-202ENST00000417300 LTFP02788 710 aa12.38□□□□□ -0.43
GABRE-202ENST00000417300 URODP06132 367 aa12.38□□□□□ -0.43
GABRE-202ENST00000417300 USP17L7P0C7H9 530 aa12.38□□□□□ -0.43
GABRE-202ENST00000417300 HAPLN1P10915 354 aaPredicted RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms