RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 OR2W6PQ8NHA6 318 aa17.81■□□□□ 0.44
PHRF1-202ENST00000413872 KLF6Q99612 283 aaPredicted RBP17.81■□□□□ 0.44
PHRF1-202ENST00000413872 SENP6Q9GZR1 1112 aaPredicted RBP17.81■□□□□ 0.44
PHRF1-202ENST00000413872 MARCOQ9UEW3 520 aaPredicted RBP17.81■□□□□ 0.44
PHRF1-202ENST00000413872 SHOC2Q9UQ13 582 aa17.81■□□□□ 0.44
PHRF1-202ENST00000413872 TMEM150BA6NC51 233 aa17.8■□□□□ 0.44
PHRF1-202ENST00000413872 GLTPD2A6NH11 291 aa17.8■□□□□ 0.44
PHRF1-202ENST00000413872 CES2O00748 559 aa17.8■□□□□ 0.44
PHRF1-202ENST00000413872 PRKCQQ04759 706 aa17.8■□□□□ 0.44
PHRF1-202ENST00000413872 CHI3L2Q15782 390 aa17.8■□□□□ 0.44
PHRF1-202ENST00000413872 WDR93Q6P2C0 686 aa17.8■□□□□ 0.44
PHRF1-202ENST00000413872 FZD1Q9UP38 647 aa17.8■□□□□ 0.44
PHRF1-202ENST00000413872 EIF3LQ9Y262 564 aaKnown RBP17.8■□□□□ 0.44
PHRF1-202ENST00000413872 ADGRA2Q96PE1 1338 aa17.8■□□□□ 0.44
PHRF1-202ENST00000413872 ACADMP11310 421 aa17.8■□□□□ 0.44
PHRF1-202ENST00000413872 HSD17B3P37058 310 aa17.8■□□□□ 0.44
PHRF1-202ENST00000413872 RAP1GDS1P52306 607 aa17.8■□□□□ 0.44
PHRF1-202ENST00000413872 FAM110CQ1W6H9 321 aa17.8■□□□□ 0.44
PHRF1-202ENST00000413872 SH3RF1Q7Z6J0 888 aa17.8■□□□□ 0.44
PHRF1-202ENST00000413872 EDEM1Q92611 657 aa17.8■□□□□ 0.44
PHRF1-202ENST00000413872 FUCA2Q9BTY2 467 aa17.8■□□□□ 0.44
PHRF1-202ENST00000413872 GANQ9H2C0 597 aa17.8■□□□□ 0.44
PHRF1-202ENST00000413872 ABCC13Q9NSE7 274 aa17.8■□□□□ 0.44
PHRF1-202ENST00000413872 SLC24A2Q9UI40 661 aa17.8■□□□□ 0.44
PHRF1-202ENST00000413872 LTFP02788 710 aa17.8■□□□□ 0.44
PHRF1-202ENST00000413872 CDH17Q12864 832 aa17.8■□□□□ 0.44
PHRF1-202ENST00000413872 ILDR2Q71H61 639 aa17.8■□□□□ 0.44
PHRF1-202ENST00000413872 ZNF473Q8WTR7 871 aaKnown RBP17.8■□□□□ 0.44
PHRF1-202ENST00000413872 ZCCHC2Q9C0B9 1178 aaKnown RBP17.8■□□□□ 0.44
PHRF1-202ENST00000413872 ATP13A1Q9HD20 1204 aa17.8■□□□□ 0.44
PHRF1-202ENST00000413872 TFR2Q9UP52 801 aa17.8■□□□□ 0.44
PHRF1-202ENST00000413872 SF3B1O75533 1304 aaKnown RBP eCLIP17.8■□□□□ 0.441e-8■■■■■ 140.7
PHRF1-202ENST00000413872 FGRP09769 529 aa17.8■□□□□ 0.44
PHRF1-202ENST00000413872 ENO3P13929 434 aaPredicted RBP17.8■□□□□ 0.44
PHRF1-202ENST00000413872 ATP6V1E1P36543 226 aa17.8■□□□□ 0.44
PHRF1-202ENST00000413872 MKRN4PQ13434 485 aaPredicted RBP17.8■□□□□ 0.44
PHRF1-202ENST00000413872 CAMK2GQ13555 558 aaPredicted RBP17.8■□□□□ 0.44
PHRF1-202ENST00000413872 CACHD1Q5VU97 1274 aa17.8■□□□□ 0.44
PHRF1-202ENST00000413872 COLGALT1Q8NBJ5 622 aa17.8■□□□□ 0.44
PHRF1-202ENST00000413872 ZBTB45Q96K62 511 aaPredicted RBP17.8■□□□□ 0.44
PHRF1-202ENST00000413872 PPP1R36Q96LQ0 422 aa17.8■□□□□ 0.44
PHRF1-202ENST00000413872 AURKCQ9UQB9 309 aa17.8■□□□□ 0.44
PHRF1-202ENST00000413872 SLC9A3R1O14745 358 aaPredicted RBP17.79■□□□□ 0.44
PHRF1-202ENST00000413872 SLC39A12Q504Y0 691 aa17.79■□□□□ 0.44
PHRF1-202ENST00000413872 SLC26A11Q86WA9 606 aa17.79■□□□□ 0.44
PHRF1-202ENST00000413872 SLC9A9Q8IVB4 645 aa17.79■□□□□ 0.44
PHRF1-202ENST00000413872 ARMC2Q8NEN0 867 aa17.79■□□□□ 0.44
PHRF1-202ENST00000413872 CASKIN2Q8WXE0 1202 aa17.79■□□□□ 0.44
PHRF1-202ENST00000413872 MRPL17Q9NRX2 175 aaKnown RBP17.79■□□□□ 0.44
PHRF1-202ENST00000413872 ANKRD63C9JTQ0 380 aa17.79■□□□□ 0.44
PHRF1-202ENST00000413872 OR1E1P30953 314 aa17.79■□□□□ 0.44
PHRF1-202ENST00000413872 RPL9P32969 192 aaKnown RBP17.79■□□□□ 0.44
PHRF1-202ENST00000413872 CRYBB1P53674 252 aaPredicted RBP17.79■□□□□ 0.44
PHRF1-202ENST00000413872 C2CD2Q9Y426 696 aa17.79■□□□□ 0.44
PHRF1-202ENST00000413872 MED1Q15648 1581 aaPredicted RBP17.79■□□□□ 0.44
PHRF1-202ENST00000413872 COL1A2P08123 1366 aa17.79■□□□□ 0.44
PHRF1-202ENST00000413872 FAM237AA0A1B0GTK4 181 aa17.79■□□□□ 0.44
PHRF1-202ENST00000413872 RBAK-RBAKDNI3L0D1 243 aa17.79■□□□□ 0.44
PHRF1-202ENST00000413872 ZSCAN9O15535 394 aaPredicted RBP17.79■□□□□ 0.44
PHRF1-202ENST00000413872 TUBP50607 506 aa17.79■□□□□ 0.44
PHRF1-202ENST00000413872 SCNN1BP51168 640 aa17.79■□□□□ 0.44
PHRF1-202ENST00000413872 MGAT5Q09328 741 aa17.79■□□□□ 0.44
PHRF1-202ENST00000413872 DEFB106AQ8N104 65 aa17.79■□□□□ 0.44
PHRF1-202ENST00000413872 HAS1Q92839 578 aa17.79■□□□□ 0.44
PHRF1-202ENST00000413872 LACRTQ9GZZ8 138 aa17.79■□□□□ 0.44
PHRF1-202ENST00000413872 UTP6Q9NYH9 597 aaKnown RBP17.79■□□□□ 0.44
PHRF1-202ENST00000413872 GRK3P35626 688 aa17.79■□□□□ 0.44
PHRF1-202ENST00000413872 SKOR1P84550 965 aa17.79■□□□□ 0.44
PHRF1-202ENST00000413872 STX5Q13190 355 aa17.79■□□□□ 0.44
PHRF1-202ENST00000413872 C18orf25Q96B23 403 aaPredicted RBP17.79■□□□□ 0.44
PHRF1-202ENST00000413872 TMA16Q96EY4 203 aaKnown RBP17.79■□□□□ 0.44
PHRF1-202ENST00000413872 HSFY1Q96LI6 401 aa17.79■□□□□ 0.44
PHRF1-202ENST00000413872 TMEM121Q9BTD3 319 aa17.79■□□□□ 0.44
PHRF1-202ENST00000413872 L2HGDHQ9H9P8 463 aa17.79■□□□□ 0.44
PHRF1-202ENST00000413872 ARIH2O95376 493 aa17.78■□□□□ 0.44
PHRF1-202ENST00000413872 HSPA1AP0DMV8 641 aaKnown RBP17.78■□□□□ 0.44
PHRF1-202ENST00000413872 HSPA1BP0DMV9 641 aaKnown RBP17.78■□□□□ 0.44
PHRF1-202ENST00000413872 PEX19P40855 299 aa17.78■□□□□ 0.44
PHRF1-202ENST00000413872 PSEN1P49768 467 aa17.78■□□□□ 0.44
PHRF1-202ENST00000413872 SPASTQ9UBP0 616 aa17.78■□□□□ 0.44
PHRF1-202ENST00000413872 ACOT9Q9Y305 439 aa17.78■□□□□ 0.44
PHRF1-202ENST00000413872 EFCAB14O75071 495 aa17.78■□□□□ 0.44
PHRF1-202ENST00000413872 SUPT7LO94864 414 aa17.78■□□□□ 0.44
PHRF1-202ENST00000413872 IGSF6O95976 241 aa17.78■□□□□ 0.44
PHRF1-202ENST00000413872 FAM107AO95990 144 aa17.78■□□□□ 0.44
PHRF1-202ENST00000413872 ALOX15P16050 662 aaPredicted RBP17.78■□□□□ 0.44
PHRF1-202ENST00000413872 ST3GAL1Q11201 340 aa17.78■□□□□ 0.44
PHRF1-202ENST00000413872 MPP3Q13368 585 aa17.78■□□□□ 0.44
PHRF1-202ENST00000413872 MTM1Q13496 603 aa17.78■□□□□ 0.44
PHRF1-202ENST00000413872 KCNK18Q7Z418 384 aa17.78■□□□□ 0.44
PHRF1-202ENST00000413872 LENG9Q96B70 501 aa17.78■□□□□ 0.44
PHRF1-202ENST00000413872 CDH9Q9ULB4 789 aa17.78■□□□□ 0.44
PHRF1-202ENST00000413872 PRR23AA6NEV1 266 aa17.78■□□□□ 0.44
PHRF1-202ENST00000413872 PHF20L1A8MW92 1017 aa17.78■□□□□ 0.44
PHRF1-202ENST00000413872 MAP3K6O95382 1288 aa17.78■□□□□ 0.44
PHRF1-202ENST00000413872 OCA2Q04671 838 aa17.78■□□□□ 0.44
PHRF1-202ENST00000413872 CNGA2Q16280 664 aa17.78■□□□□ 0.44
PHRF1-202ENST00000413872 COPS5Q92905 334 aa17.78■□□□□ 0.44
PHRF1-202ENST00000413872 ZNF556Q9HAH1 456 aa17.78■□□□□ 0.44
PHRF1-202ENST00000413872 IARS2Q9NSE4 1012 aaKnown RBP17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms