RNA–Protein interactions for RNA: ENST00000409402.8

SPIRE1-202, Transcript of spire type actin nucleation factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPIRE1, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-202ENST00000409402 AGGF1Q8N302 714 aaeCLIP25.81■■□□□ 1.723e-8■■■■■ 40
SPIRE1-202ENST00000409402 TMEM51Q9NW97 253 aa25.81■■□□□ 1.72
SPIRE1-202ENST00000409402 KIF20BQ96Q89 1820 aa25.81■■□□□ 1.72
SPIRE1-202ENST00000409402 PHF20L1A8MW92 1017 aa25.81■■□□□ 1.72
SPIRE1-202ENST00000409402 FKTNO75072 461 aa25.81■■□□□ 1.72
SPIRE1-202ENST00000409402 ZNF571Q7Z3V5 609 aaPredicted RBP25.81■■□□□ 1.72
SPIRE1-202ENST00000409402 LONP2Q86WA8 852 aa25.81■■□□□ 1.72
SPIRE1-202ENST00000409402 BBS7Q8IWZ6 715 aa25.81■■□□□ 1.72
SPIRE1-202ENST00000409402 HOMEZQ8IX15 550 aa25.81■■□□□ 1.72
SPIRE1-202ENST00000409402 ZNF606Q8WXB4 792 aa25.81■■□□□ 1.72
SPIRE1-202ENST00000409402 ZIM3Q96PE6 472 aa25.81■■□□□ 1.72
SPIRE1-202ENST00000409402 SPATS2LQ9NUQ6 558 aaKnown RBP25.81■■□□□ 1.72
SPIRE1-202ENST00000409402 COLGALT1Q8NBJ5 622 aa25.81■■□□□ 1.72
SPIRE1-202ENST00000409402 PHF21AQ96BD5 680 aa25.81■■□□□ 1.72
SPIRE1-202ENST00000409402 TUBGCP3Q96CW5 907 aa25.81■■□□□ 1.72
SPIRE1-202ENST00000409402 DCLK3Q9C098 648 aa25.81■■□□□ 1.72
SPIRE1-202ENST00000409402 RBAK-RBAKDNI3L0D1 243 aa25.8■■□□□ 1.72
SPIRE1-202ENST00000409402 MSH3P20585 1137 aa25.8■■□□□ 1.72
SPIRE1-202ENST00000409402 TUBP50607 506 aa25.8■■□□□ 1.72
SPIRE1-202ENST00000409402 KBTBD12Q3ZCT8 623 aa25.8■■□□□ 1.72
SPIRE1-202ENST00000409402 ABTB1Q969K4 478 aaPredicted RBP25.8■■□□□ 1.72
SPIRE1-202ENST00000409402 SOX11P35716 441 aa25.8■■□□□ 1.72
SPIRE1-202ENST00000409402 GCNT1Q02742 428 aa25.8■■□□□ 1.72
SPIRE1-202ENST00000409402 TGM3Q08188 693 aa25.8■■□□□ 1.72
SPIRE1-202ENST00000409402 CDC16Q13042 620 aa25.8■■□□□ 1.72
SPIRE1-202ENST00000409402 CNGA3Q16281 694 aa25.8■■□□□ 1.72
SPIRE1-202ENST00000409402 FBXL16Q8N461 479 aa25.8■■□□□ 1.72
SPIRE1-202ENST00000409402 MKL1Q969V6 931 aa25.8■■□□□ 1.72
SPIRE1-202ENST00000409402 TMEM150BA6NC51 233 aa25.8■■□□□ 1.72
SPIRE1-202ENST00000409402 TMED1Q13445 227 aa25.8■■□□□ 1.72
SPIRE1-202ENST00000409402 TFAP2DQ7Z6R9 452 aa25.8■■□□□ 1.72
SPIRE1-202ENST00000409402 PRPF39Q86UA1 669 aaKnown RBP25.8■■□□□ 1.72
SPIRE1-202ENST00000409402 MCOLN2Q8IZK6 566 aa25.8■■□□□ 1.72
SPIRE1-202ENST00000409402 FAM9CQ8IZT9 166 aa25.8■■□□□ 1.72
SPIRE1-202ENST00000409402 SLC2A14Q8TDB8 520 aa25.8■■□□□ 1.72
SPIRE1-202ENST00000409402 PNMA5Q96PV4 448 aa25.8■■□□□ 1.72
SPIRE1-202ENST00000409402 ECSITQ9BQ95 431 aa25.8■■□□□ 1.72
SPIRE1-202ENST00000409402 TMEM121Q9BTD3 319 aa25.8■■□□□ 1.72
SPIRE1-202ENST00000409402 MRPL17Q9NRX2 175 aaKnown RBP25.8■■□□□ 1.72
SPIRE1-202ENST00000409402 NOGQ13253 232 aa25.8■■□□□ 1.72
SPIRE1-202ENST00000409402 NFIL3Q16649 462 aa25.8■■□□□ 1.72
SPIRE1-202ENST00000409402 TJAP1Q5JTD0 557 aa25.8■■□□□ 1.72
SPIRE1-202ENST00000409402 CXCL17Q6UXB2 119 aa25.8■■□□□ 1.72
SPIRE1-202ENST00000409402 CEP70Q8NHQ1 597 aa25.8■■□□□ 1.72
SPIRE1-202ENST00000409402 UROC1Q96N76 676 aa25.8■■□□□ 1.72
SPIRE1-202ENST00000409402 NCKAP1Q9Y2A7 1128 aa25.8■■□□□ 1.72
SPIRE1-202ENST00000409402 GPC1P35052 558 aa25.79■■□□□ 1.72
SPIRE1-202ENST00000409402 C16orf87Q6PH81 154 aa25.79■■□□□ 1.72
SPIRE1-202ENST00000409402 ERP27Q96DN0 273 aa25.79■■□□□ 1.72
SPIRE1-202ENST00000409402 CELF6Q96J87 481 aaKnown RBP25.79■■□□□ 1.72
SPIRE1-202ENST00000409402 CCT8L2Q96SF2 557 aa25.79■■□□□ 1.72
SPIRE1-202ENST00000409402 CYP39A1Q9NYL5 469 aa25.79■■□□□ 1.72
SPIRE1-202ENST00000409402 TMEM131LA2VDJ0 1609 aa25.79■■□□□ 1.72
SPIRE1-202ENST00000409402 ITGA9Q13797 1035 aa25.79■■□□□ 1.72
SPIRE1-202ENST00000409402 ANKS6Q68DC2 871 aa25.79■■□□□ 1.72
SPIRE1-202ENST00000409402 MAP4K3Q8IVH8 894 aa25.79■■□□□ 1.72
SPIRE1-202ENST00000409402 FAM111AQ96PZ2 611 aa25.79■■□□□ 1.72
SPIRE1-202ENST00000409402 RMND5AQ9H871 391 aa25.79■■□□□ 1.72
SPIRE1-202ENST00000409402 WDR41Q9HAD4 459 aa25.79■■□□□ 1.72
SPIRE1-202ENST00000409402 UTP6Q9NYH9 597 aaKnown RBP25.79■■□□□ 1.72
SPIRE1-202ENST00000409402 C16orf96A6NNT2 1141 aa25.79■■□□□ 1.72
SPIRE1-202ENST00000409402 DGKIO75912 1065 aa25.79■■□□□ 1.72
SPIRE1-202ENST00000409402 STRA8Q7Z7C7 330 aa25.79■■□□□ 1.72
SPIRE1-202ENST00000409402 SKA1Q96BD8 255 aa25.79■■□□□ 1.72
SPIRE1-202ENST00000409402 PNMA8BQ9ULN7 279 aaPredicted RBP25.79■■□□□ 1.72
SPIRE1-202ENST00000409402 DISP2A7MBM2 1401 aa25.79■■□□□ 1.72
SPIRE1-202ENST00000409402 CAND2O75155 1236 aa25.79■■□□□ 1.72
SPIRE1-202ENST00000409402 MAP2K5Q13163 448 aa25.79■■□□□ 1.72
SPIRE1-202ENST00000409402 LZTR1Q8N653 840 aa25.79■■□□□ 1.72
SPIRE1-202ENST00000409402 RBP1P09455 135 aa25.79■■□□□ 1.72
SPIRE1-202ENST00000409402 DARSP14868 501 aaKnown RBP25.79■■□□□ 1.72
SPIRE1-202ENST00000409402 CNTFP26441 200 aa25.79■■□□□ 1.72
SPIRE1-202ENST00000409402 FKBP1BP68106 108 aa25.79■■□□□ 1.72
SPIRE1-202ENST00000409402 CCNG2Q16589 344 aa25.79■■□□□ 1.72
SPIRE1-202ENST00000409402 LGI2Q8N0V4 545 aa25.79■■□□□ 1.72
SPIRE1-202ENST00000409402 RECQL4O94761 1208 aa25.78■■□□□ 1.72
SPIRE1-202ENST00000409402 IGSF6O95976 241 aa25.78■■□□□ 1.72
SPIRE1-202ENST00000409402 IGFBP4P22692 258 aa25.78■■□□□ 1.72
SPIRE1-202ENST00000409402 LRRC8BQ6P9F7 803 aa25.78■■□□□ 1.72
SPIRE1-202ENST00000409402 LAYNQ6UX15 382 aa25.78■■□□□ 1.72
SPIRE1-202ENST00000409402 KIAA0895Q8NCT3 520 aa25.78■■□□□ 1.72
SPIRE1-202ENST00000409402 ZNF558Q96NG5 402 aa25.78■■□□□ 1.72
SPIRE1-202ENST00000409402 GAD1Q99259 594 aa25.78■■□□□ 1.72
SPIRE1-202ENST00000409402 AGXT2Q9BYV1 514 aa25.78■■□□□ 1.72
SPIRE1-202ENST00000409402 PORCNQ9H237 461 aa25.78■■□□□ 1.72
SPIRE1-202ENST00000409402 TMEM134Q9H6X4 195 aa25.78■■□□□ 1.72
SPIRE1-202ENST00000409402 ZBTB17Q13105 803 aa25.78■■□□□ 1.72
SPIRE1-202ENST00000409402 NBPF20Q3BBV1 942 aa25.78■■□□□ 1.72
SPIRE1-202ENST00000409402 PABPC1LQ4VXU2 614 aaKnown RBP25.78■■□□□ 1.72
SPIRE1-202ENST00000409402 APBA2Q99767 749 aa25.78■■□□□ 1.72
SPIRE1-202ENST00000409402 CCDC3Q9BQI4 270 aa25.78■■□□□ 1.72
SPIRE1-202ENST00000409402 MAGEB16A2A368 324 aa25.78■■□□□ 1.72
SPIRE1-202ENST00000409402 BLVRAP53004 296 aa25.78■■□□□ 1.72
SPIRE1-202ENST00000409402 EME1Q96AY2 570 aa25.78■■□□□ 1.72
SPIRE1-202ENST00000409402 SPG21Q9NZD8 308 aa25.78■■□□□ 1.72
SPIRE1-202ENST00000409402 TBC1D12O60347 775 aa25.78■■□□□ 1.72
SPIRE1-202ENST00000409402 TCN1P20061 433 aaPredicted RBP25.78■■□□□ 1.72
SPIRE1-202ENST00000409402 CCDC149Q6ZUS6 474 aa25.78■■□□□ 1.72
SPIRE1-202ENST00000409402 THTPAQ9BU02 230 aa25.78■■□□□ 1.72
SPIRE1-202ENST00000409402 ZCCHC2Q9C0B9 1178 aaKnown RBP25.78■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms