RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 TMEM119Q4V9L6 283 aa5.18□□□□□ -1.58
SCN3A-203ENST00000409101 ARMC12Q5T9G4 340 aa5.18□□□□□ -1.58
SCN3A-203ENST00000409101 HLA-DQA1Q5Y7H0 255 aa5.18□□□□□ -1.58
SCN3A-203ENST00000409101 PATL1Q86TB9 770 aaKnown RBP5.18□□□□□ -1.58
SCN3A-203ENST00000409101 TMCO5AQ8N6Q1 288 aa5.18□□□□□ -1.58
SCN3A-203ENST00000409101 TMEM159Q96B96 161 aa5.18□□□□□ -1.58
SCN3A-203ENST00000409101 PNKPQ96T60 521 aa5.18□□□□□ -1.58
SCN3A-203ENST00000409101 ACO2Q99798 780 aaKnown RBP5.18□□□□□ -1.58
SCN3A-203ENST00000409101 C2orf49Q9BVC5 232 aaPredicted RBP5.18□□□□□ -1.58
SCN3A-203ENST00000409101 SPASTQ9UBP0 616 aa5.18□□□□□ -1.58
SCN3A-203ENST00000409101 HES2Q9Y543 173 aa5.18□□□□□ -1.58
SCN3A-203ENST00000409101 BCL9LQ86UU0 1499 aa5.17□□□□□ -1.58
SCN3A-203ENST00000409101 A0A1B0GTH6 734 aa5.17□□□□□ -1.58
SCN3A-203ENST00000409101 AGRPO00253 132 aa5.17□□□□□ -1.58
SCN3A-203ENST00000409101 GLP2RO95838 553 aa5.17□□□□□ -1.58
SCN3A-203ENST00000409101 YBX3P16989 372 aaKnown RBP eCLIP5.17□□□□□ -1.58
SCN3A-203ENST00000409101 MRPS25P82663 173 aaKnown RBP5.17□□□□□ -1.58
SCN3A-203ENST00000409101 DAB2P98082 770 aa5.17□□□□□ -1.58
SCN3A-203ENST00000409101 CLEC16AQ2KHT3 1053 aa5.17□□□□□ -1.58
SCN3A-203ENST00000409101 METTL3Q86U44 580 aaKnown RBP5.17□□□□□ -1.58
SCN3A-203ENST00000409101 MMGT1Q8N4V1 131 aa5.17□□□□□ -1.58
SCN3A-203ENST00000409101 LZTR1Q8N653 840 aa5.17□□□□□ -1.58
SCN3A-203ENST00000409101 EXD1Q8NHP7 514 aa5.17□□□□□ -1.58
SCN3A-203ENST00000409101 LENG9Q96B70 501 aa5.17□□□□□ -1.58
SCN3A-203ENST00000409101 ZNF669Q96BR6 464 aaPredicted RBP5.17□□□□□ -1.58
SCN3A-203ENST00000409101 ZBTB45Q96K62 511 aaPredicted RBP5.17□□□□□ -1.58
SCN3A-203ENST00000409101 ZFP42Q96MM3 310 aa5.17□□□□□ -1.58
SCN3A-203ENST00000409101 BRD8Q9H0E9 1235 aa5.17□□□□□ -1.58
SCN3A-203ENST00000409101 TXLNGQ9NUQ3 528 aa5.17□□□□□ -1.58
SCN3A-203ENST00000409101 RIC8BQ9NVN3 520 aa5.17□□□□□ -1.58
SCN3A-203ENST00000409101 SMARCAL1Q9NZC9 954 aa5.17□□□□□ -1.58
SCN3A-203ENST00000409101 TBC1D14Q9P2M4 693 aa5.17□□□□□ -1.58
SCN3A-203ENST00000409101 PPARGC1AQ9UBK2 798 aaKnown RBP5.17□□□□□ -1.58
SCN3A-203ENST00000409101 VPS51Q9UID3 782 aa5.17□□□□□ -1.58
SCN3A-203ENST00000409101 DNPEPQ9ULA0 475 aa5.17□□□□□ -1.58
SCN3A-203ENST00000409101 PADI3Q9ULW8 664 aa5.17□□□□□ -1.58
SCN3A-203ENST00000409101 NEDD8-MDP1E9PL57 170 aa5.17□□□□□ -1.58
SCN3A-203ENST00000409101 PDE2AO00408 941 aaPredicted RBP5.17□□□□□ -1.58
SCN3A-203ENST00000409101 EML1O00423 815 aa5.17□□□□□ -1.58
SCN3A-203ENST00000409101 SPAG6O75602 509 aa5.17□□□□□ -1.58
SCN3A-203ENST00000409101 LTFP02788 710 aa5.17□□□□□ -1.58
SCN3A-203ENST00000409101 ESRRAP11474 423 aaPredicted RBP5.17□□□□□ -1.58
SCN3A-203ENST00000409101 TGM2P21980 687 aa5.17□□□□□ -1.58
SCN3A-203ENST00000409101 CYP2F1P24903 491 aa5.17□□□□□ -1.58
SCN3A-203ENST00000409101 CYP2C18P33260 490 aa5.17□□□□□ -1.58
SCN3A-203ENST00000409101 KLK7P49862 253 aa5.17□□□□□ -1.58
SCN3A-203ENST00000409101 MARSP56192 900 aaKnown RBP5.17□□□□□ -1.58
SCN3A-203ENST00000409101 SESN3P58005 492 aa5.17□□□□□ -1.58
SCN3A-203ENST00000409101 CNTN1Q12860 1018 aa5.17□□□□□ -1.58
SCN3A-203ENST00000409101 EMBQ6PCB8 327 aa5.17□□□□□ -1.58
SCN3A-203ENST00000409101 USP49Q70CQ1 688 aa5.17□□□□□ -1.58
SCN3A-203ENST00000409101 PPIL6Q8IXY8 311 aa5.17□□□□□ -1.58
SCN3A-203ENST00000409101 ARMC2Q8NEN0 867 aa5.17□□□□□ -1.58
SCN3A-203ENST00000409101 STAMBPL1Q96FJ0 436 aa5.17□□□□□ -1.58
SCN3A-203ENST00000409101 CELF6Q96J87 481 aaKnown RBP5.17□□□□□ -1.58
SCN3A-203ENST00000409101 FAM118BQ9BPY3 351 aa5.17□□□□□ -1.58
SCN3A-203ENST00000409101 RNPEPQ9H4A4 650 aa5.17□□□□□ -1.58
SCN3A-203ENST00000409101 CFAP97Q9P2B7 532 aa5.17□□□□□ -1.58
SCN3A-203ENST00000409101 RPS6KB2Q9UBS0 482 aa5.17□□□□□ -1.58
SCN3A-203ENST00000409101 GTF3C4Q9UKN8 822 aa5.17□□□□□ -1.58
SCN3A-203ENST00000409101 NEU2Q9Y3R4 380 aa5.17□□□□□ -1.58
SCN3A-203ENST00000409101 PPP1R3GB7ZBB8 358 aa5.17□□□□□ -1.58
SCN3A-203ENST00000409101 TREHO43280 583 aa5.17□□□□□ -1.58
SCN3A-203ENST00000409101 PSMD10O75832 226 aa5.17□□□□□ -1.58
SCN3A-203ENST00000409101 APOA4P06727 396 aa5.17□□□□□ -1.58
SCN3A-203ENST00000409101 ITIH2P19823 946 aa5.17□□□□□ -1.58
SCN3A-203ENST00000409101 RRM1P23921 792 aa5.17□□□□□ -1.58
SCN3A-203ENST00000409101 CENPAP49450 140 aa5.17□□□□□ -1.58
SCN3A-203ENST00000409101 NCKAP1LP55160 1127 aa5.17□□□□□ -1.58
SCN3A-203ENST00000409101 SEC13P55735 322 aa5.17□□□□□ -1.58
SCN3A-203ENST00000409101 SKP1P63208 163 aa5.17□□□□□ -1.58
SCN3A-203ENST00000409101 ZNF200P98182 395 aaPredicted RBP5.17□□□□□ -1.58
SCN3A-203ENST00000409101 SLC6A3Q01959 620 aa5.17□□□□□ -1.58
SCN3A-203ENST00000409101 TLE2Q04725 743 aa5.17□□□□□ -1.58
SCN3A-203ENST00000409101 TUSC3Q13454 348 aa5.17□□□□□ -1.58
SCN3A-203ENST00000409101 CAPSQ13938 189 aa5.17□□□□□ -1.58
SCN3A-203ENST00000409101 CCL14Q16627 93 aa5.17□□□□□ -1.58
SCN3A-203ENST00000409101 CCDC38Q502W7 563 aa5.17□□□□□ -1.58
SCN3A-203ENST00000409101 PRR23BQ6ZRT6 265 aa5.17□□□□□ -1.58
SCN3A-203ENST00000409101 TRMT10CQ7L0Y3 403 aaKnown RBP5.17□□□□□ -1.58
SCN3A-203ENST00000409101 CCDC33Q8N5R6 958 aa5.17□□□□□ -1.58
SCN3A-203ENST00000409101 TOP6BLQ8N6T0 577 aa5.17□□□□□ -1.58
SCN3A-203ENST00000409101 TDRD5Q8NAT2 981 aaKnown RBP5.17□□□□□ -1.58
SCN3A-203ENST00000409101 ULBP1Q9BZM6 244 aa5.17□□□□□ -1.58
SCN3A-203ENST00000409101 XAB2Q9HCS7 855 aaKnown RBP5.17□□□□□ -1.58
SCN3A-203ENST00000409101 CHCHD3Q9NX63 227 aaKnown RBP5.17□□□□□ -1.58
SCN3A-203ENST00000409101 CHORDC1Q9UHD1 332 aaPredicted RBP5.17□□□□□ -1.58
SCN3A-203ENST00000409101 USP20Q9Y2K6 914 aa5.17□□□□□ -1.58
SCN3A-203ENST00000409101 DERAQ9Y315 318 aa5.17□□□□□ -1.58
SCN3A-203ENST00000409101 PCDHA2Q9Y5H9 948 aa5.17□□□□□ -1.58
SCN3A-203ENST00000409101 TARSL2A2RTX5 802 aaKnown RBP5.17□□□□□ -1.58
SCN3A-203ENST00000409101 ANKRD63C9JTQ0 380 aa5.17□□□□□ -1.58
SCN3A-203ENST00000409101 FOXN3O00409 490 aaPredicted RBP5.17□□□□□ -1.58
SCN3A-203ENST00000409101 SPAG7O75391 227 aa5.17□□□□□ -1.58
SCN3A-203ENST00000409101 IL1BP01584 269 aa5.17□□□□□ -1.58
SCN3A-203ENST00000409101 NFICP08651 508 aa5.17□□□□□ -1.58
SCN3A-203ENST00000409101 RBP3P10745 1247 aa5.17□□□□□ -1.58
SCN3A-203ENST00000409101 HPGDP15428 266 aa5.17□□□□□ -1.58
SCN3A-203ENST00000409101 VEGFBP49765 207 aa5.17□□□□□ -1.58
SCN3A-203ENST00000409101 STAT4Q14765 748 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms