RNA–Protein interactions for RNA: ENST00000409050.1

SCN1A-203, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 5,946 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-203ENST00000409050 COMMD3-BMI1R4GMX3 469 aa6.28□□□□□ -1.4
SCN1A-203ENST00000409050 ZNF609O15014 1411 aa6.28□□□□□ -1.4
SCN1A-203ENST00000409050 GPR75-ASB3A0A0A6YYF3 556 aa6.27□□□□□ -1.4
SCN1A-203ENST00000409050 F5H5T6 163 aa6.27□□□□□ -1.4
SCN1A-203ENST00000409050 WBP4O75554 376 aaKnown RBP6.27□□□□□ -1.4
SCN1A-203ENST00000409050 UQCRBP14927 111 aa6.27□□□□□ -1.4
SCN1A-203ENST00000409050 SERPINB5P36952 375 aa6.27□□□□□ -1.4
SCN1A-203ENST00000409050 OAZ1P54368 228 aa6.27□□□□□ -1.4
SCN1A-203ENST00000409050 DCTN2Q13561 401 aaKnown RBP6.27□□□□□ -1.4
SCN1A-203ENST00000409050 RASA2Q15283 850 aa6.27□□□□□ -1.4
SCN1A-203ENST00000409050 GOLGA7BQ2TAP0 167 aa6.27□□□□□ -1.4
SCN1A-203ENST00000409050 NT5DC1Q5TFE4 455 aa6.27□□□□□ -1.4
SCN1A-203ENST00000409050 LYPLAL1Q5VWZ2 237 aa6.27□□□□□ -1.4
SCN1A-203ENST00000409050 IL31Q6EBC2 164 aa6.27□□□□□ -1.4
SCN1A-203ENST00000409050 MPZL3Q6UWV2 235 aa6.27□□□□□ -1.4
SCN1A-203ENST00000409050 PI16Q6UXB8 463 aa6.27□□□□□ -1.4
SCN1A-203ENST00000409050 ATG9AQ7Z3C6 839 aa6.27□□□□□ -1.4
SCN1A-203ENST00000409050 ZNF34Q8IZ26 560 aa6.27□□□□□ -1.4
SCN1A-203ENST00000409050 ZCCHC7Q8N3Z6 543 aaKnown RBP6.27□□□□□ -1.4
SCN1A-203ENST00000409050 GMCL1P1Q8NEA9 526 aa6.27□□□□□ -1.4
SCN1A-203ENST00000409050 KBTBD8Q8NFY9 601 aa6.27□□□□□ -1.4
SCN1A-203ENST00000409050 OR56A4Q8NGH8 313 aa6.27□□□□□ -1.4
SCN1A-203ENST00000409050 FNIP1Q8TF40 1166 aa6.27□□□□□ -1.4
SCN1A-203ENST00000409050 FAM120BQ96EK7 910 aaKnown RBP6.27□□□□□ -1.4
SCN1A-203ENST00000409050 HPDLQ96IR7 371 aa6.27□□□□□ -1.4
SCN1A-203ENST00000409050 PANX3Q96QZ0 392 aa6.27□□□□□ -1.4
SCN1A-203ENST00000409050 CLPBQ9H078 707 aa6.27□□□□□ -1.4
SCN1A-203ENST00000409050 COPS7BQ9H9Q2 264 aaPredicted RBP6.27□□□□□ -1.4
SCN1A-203ENST00000409050 UBP1Q9NZI7 540 aa6.27□□□□□ -1.4
SCN1A-203ENST00000409050 SH3BP4Q9P0V3 963 aa6.27□□□□□ -1.4
SCN1A-203ENST00000409050 KANSL3Q9P2N6 904 aa6.27□□□□□ -1.4
SCN1A-203ENST00000409050 SLC39A10Q9ULF5 831 aa6.27□□□□□ -1.4
SCN1A-203ENST00000409050 CLCA2Q9UQC9 943 aa6.27□□□□□ -1.4
SCN1A-203ENST00000409050 UNC13AQ9UPW8 1703 aa6.27□□□□□ -1.4
SCN1A-203ENST00000409050 CD163L1Q9NR16 1453 aa6.27□□□□□ -1.41
SCN1A-203ENST00000409050 RAD51BO15315 384 aa6.27□□□□□ -1.41
SCN1A-203ENST00000409050 ATP6V1G2O95670 118 aa6.27□□□□□ -1.41
SCN1A-203ENST00000409050 MOCS2O96007 188 aaPredicted RBP6.27□□□□□ -1.41
SCN1A-203ENST00000409050 ME2P23368 584 aa6.27□□□□□ -1.41
SCN1A-203ENST00000409050 SREBF1P36956 1147 aa6.27□□□□□ -1.41
SCN1A-203ENST00000409050 PRKCEQ02156 737 aa6.27□□□□□ -1.41
SCN1A-203ENST00000409050 SPIRE1Q08AE8 756 aa6.27□□□□□ -1.41
SCN1A-203ENST00000409050 STK4Q13043 487 aa6.27□□□□□ -1.41
SCN1A-203ENST00000409050 MPP3Q13368 585 aa6.27□□□□□ -1.41
SCN1A-203ENST00000409050 CAMK2GQ13555 558 aaPredicted RBP6.27□□□□□ -1.41
SCN1A-203ENST00000409050 ZNF284Q2VY69 593 aa6.27□□□□□ -1.41
SCN1A-203ENST00000409050 SPANXN2Q5MJ10 180 aa6.27□□□□□ -1.41
SCN1A-203ENST00000409050 SNX30Q5VWJ9 437 aa6.27□□□□□ -1.41
SCN1A-203ENST00000409050 FBXW10Q5XX13 1052 aa6.27□□□□□ -1.41
SCN1A-203ENST00000409050 SPOCD1Q6ZMY3 1216 aa6.27□□□□□ -1.41
SCN1A-203ENST00000409050 C16orf62Q7Z3J2 963 aa6.27□□□□□ -1.41
SCN1A-203ENST00000409050 FGD2Q7Z6J4 655 aa6.27□□□□□ -1.41
SCN1A-203ENST00000409050 CAMK1DQ8IU85 385 aa6.27□□□□□ -1.41
SCN1A-203ENST00000409050 ADHFE1Q8IWW8 467 aa6.27□□□□□ -1.41
SCN1A-203ENST00000409050 DEPDC4Q8N2C3 294 aa6.27□□□□□ -1.41
SCN1A-203ENST00000409050 LEMD2Q8NC56 503 aa6.27□□□□□ -1.41
SCN1A-203ENST00000409050 RORBQ92753 470 aa6.27□□□□□ -1.41
SCN1A-203ENST00000409050 GMCL1Q96IK5 515 aa6.27□□□□□ -1.41
SCN1A-203ENST00000409050 PAFAH2Q99487 392 aa6.27□□□□□ -1.41
SCN1A-203ENST00000409050 RACGAP1Q9H0H5 632 aa6.27□□□□□ -1.41
SCN1A-203ENST00000409050 MUC3BQ9H195 1237 aa6.27□□□□□ -1.41
SCN1A-203ENST00000409050 ASB7Q9H672 318 aa6.27□□□□□ -1.41
SCN1A-203ENST00000409050 SMURF2Q9HAU4 748 aa6.27□□□□□ -1.41
SCN1A-203ENST00000409050 MLXIPLQ9NP71 852 aa6.27□□□□□ -1.41
SCN1A-203ENST00000409050 AKAP7Q9P0M2 348 aaPredicted RBP6.27□□□□□ -1.41
SCN1A-203ENST00000409050 RPS6KL1Q9Y6S9 549 aa6.27□□□□□ -1.41
SCN1A-203ENST00000409050 PRR36Q9H6K5 1346 aa6.27□□□□□ -1.41
SCN1A-203ENST00000409050 CCDC189A1A4V9 331 aa6.27□□□□□ -1.41
SCN1A-203ENST00000409050 KBTBD13C9JR72 458 aa6.27□□□□□ -1.41
SCN1A-203ENST00000409050 DNALI1O14645 258 aaPredicted RBP6.27□□□□□ -1.41
SCN1A-203ENST00000409050 SNAP91O60641 907 aa6.27□□□□□ -1.41
SCN1A-203ENST00000409050 CBFA2T3O75081 653 aa6.27□□□□□ -1.41
SCN1A-203ENST00000409050 TGFB3P10600 412 aa6.27□□□□□ -1.41
SCN1A-203ENST00000409050 PDHBP11177 359 aa6.27□□□□□ -1.41
SCN1A-203ENST00000409050 BCAP31P51572 246 aa6.27□□□□□ -1.41
SCN1A-203ENST00000409050 RNF43Q68DV7 783 aa6.27□□□□□ -1.41
SCN1A-203ENST00000409050 NET1Q7Z628 596 aaPredicted RBP6.27□□□□□ -1.41
SCN1A-203ENST00000409050 FBXO33Q7Z6M2 555 aa6.27□□□□□ -1.41
SCN1A-203ENST00000409050 CHSY1Q86X52 802 aa6.27□□□□□ -1.41
SCN1A-203ENST00000409050 CCDC33Q8N5R6 958 aa6.27□□□□□ -1.41
SCN1A-203ENST00000409050 NKX2-3Q8TAU0 364 aa6.27□□□□□ -1.41
SCN1A-203ENST00000409050 DPF2Q92785 391 aa6.27□□□□□ -1.41
SCN1A-203ENST00000409050 EPB41L4BQ9H329 900 aa6.27□□□□□ -1.41
SCN1A-203ENST00000409050 ZCCHC17Q9NP64 241 aaKnown RBP6.27□□□□□ -1.41
SCN1A-203ENST00000409050 SLC25A13Q9UJS0 675 aa6.27□□□□□ -1.41
SCN1A-203ENST00000409050 INPP5FQ9Y2H2 1132 aa6.27□□□□□ -1.41
SCN1A-203ENST00000409050 CCDC154A6NI56 674 aa6.27□□□□□ -1.41
SCN1A-203ENST00000409050 AHCYL1O43865 530 aa6.27□□□□□ -1.41
SCN1A-203ENST00000409050 RAD17O75943 681 aa6.27□□□□□ -1.41
SCN1A-203ENST00000409050 ASMTLO95671 621 aa6.27□□□□□ -1.41
SCN1A-203ENST00000409050 NDUFB10O96000 172 aa6.27□□□□□ -1.41
SCN1A-203ENST00000409050 ICAM1P05362 532 aa6.27□□□□□ -1.41
SCN1A-203ENST00000409050 PDGFRBP09619 1106 aa6.27□□□□□ -1.41
SCN1A-203ENST00000409050 AKR1B1P15121 316 aa6.27□□□□□ -1.41
SCN1A-203ENST00000409050 ITGA2P17301 1181 aa6.27□□□□□ -1.41
SCN1A-203ENST00000409050 CHRM3P20309 590 aa6.27□□□□□ -1.41
SCN1A-203ENST00000409050 RAP1GAPP47736 663 aa6.27□□□□□ -1.41
SCN1A-203ENST00000409050 CD151P48509 253 aa6.27□□□□□ -1.41
SCN1A-203ENST00000409050 SLFN11Q7Z7L1 901 aa6.27□□□□□ -1.41
SCN1A-203ENST00000409050 DHFR2Q86XF0 187 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms