RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 FSCN3Q9NQT6 498 aa5.35□□□□□ -1.55
HMGB3P18-201ENST00000406327 FBXO28Q9NVF7 368 aa5.35□□□□□ -1.55
HMGB3P18-201ENST00000406327 TMEM160Q9NX00 188 aa5.35□□□□□ -1.55
HMGB3P18-201ENST00000406327 TBX20Q9UMR3 447 aa5.35□□□□□ -1.55
HMGB3P18-201ENST00000406327 TCAF1Q9Y4C2 921 aa5.35□□□□□ -1.55
HMGB3P18-201ENST00000406327 KIF21BO75037 1637 aa5.34□□□□□ -1.55
HMGB3P18-201ENST00000406327 CUX1P39880 1505 aa5.34□□□□□ -1.55
HMGB3P18-201ENST00000406327 RAPGEF2Q9Y4G8 1499 aa5.34□□□□□ -1.55
HMGB3P18-201ENST00000406327 CLIP1P30622 1438 aa5.34□□□□□ -1.55
HMGB3P18-201ENST00000406327 GXYLT2A0PJZ3 443 aa5.34□□□□□ -1.55
HMGB3P18-201ENST00000406327 CCDC78A2IDD5 438 aa5.34□□□□□ -1.55
HMGB3P18-201ENST00000406327 AHRRA9YTQ3 701 aa5.34□□□□□ -1.55
HMGB3P18-201ENST00000406327 F5H0A9 414 aaPredicted RBP5.34□□□□□ -1.55
HMGB3P18-201ENST00000406327 EXOC5O00471 708 aa5.34□□□□□ -1.55
HMGB3P18-201ENST00000406327 CER1O95813 267 aa5.34□□□□□ -1.55
HMGB3P18-201ENST00000406327 ONECUT2O95948 504 aa5.34□□□□□ -1.55
HMGB3P18-201ENST00000406327 CD4P01730 458 aa5.34□□□□□ -1.55
HMGB3P18-201ENST00000406327 LDHCP07864 332 aa5.34□□□□□ -1.55
HMGB3P18-201ENST00000406327 JUPP14923 745 aa5.34□□□□□ -1.55
HMGB3P18-201ENST00000406327 BMP7P18075 431 aa5.34□□□□□ -1.55
HMGB3P18-201ENST00000406327 MMP8P22894 467 aa5.34□□□□□ -1.55
HMGB3P18-201ENST00000406327 DDX6P26196 483 aaKnown RBP eCLIP5.34□□□□□ -1.55
HMGB3P18-201ENST00000406327 ACRV1P26436 265 aa5.34□□□□□ -1.55
HMGB3P18-201ENST00000406327 HTR7P34969 479 aa5.34□□□□□ -1.55
HMGB3P18-201ENST00000406327 SEC24CP53992 1094 aa5.34□□□□□ -1.55
HMGB3P18-201ENST00000406327 FOXD4Q12950 439 aaPredicted RBP5.34□□□□□ -1.55
HMGB3P18-201ENST00000406327 NFIXQ14938 502 aa5.34□□□□□ -1.55
HMGB3P18-201ENST00000406327 ATG16L1Q676U5 607 aa5.34□□□□□ -1.55
HMGB3P18-201ENST00000406327 DENND2CQ68D51 928 aa5.34□□□□□ -1.55
HMGB3P18-201ENST00000406327 LIMS2Q7Z4I7 341 aa5.34□□□□□ -1.55
HMGB3P18-201ENST00000406327 HEATR4Q86WZ0 1026 aa5.34□□□□□ -1.55
HMGB3P18-201ENST00000406327 FSIP1Q8NA03 581 aa5.34□□□□□ -1.55
HMGB3P18-201ENST00000406327 Q8TCH9 128 aa5.34□□□□□ -1.55
HMGB3P18-201ENST00000406327 CSGALNACT1Q8TDX6 532 aa5.34□□□□□ -1.55
HMGB3P18-201ENST00000406327 SOCS4Q8WXH5 440 aa5.34□□□□□ -1.55
HMGB3P18-201ENST00000406327 HVCN1Q96D96 273 aa5.34□□□□□ -1.55
HMGB3P18-201ENST00000406327 ZBTB10Q96DT7 871 aa5.34□□□□□ -1.55
HMGB3P18-201ENST00000406327 REXO5Q96IC2 774 aaKnown RBP5.34□□□□□ -1.55
HMGB3P18-201ENST00000406327 TEPSINQ96N21 525 aa5.34□□□□□ -1.55
HMGB3P18-201ENST00000406327 ALG8Q9BVK2 526 aa5.34□□□□□ -1.55
HMGB3P18-201ENST00000406327 KRTAP9-8Q9BYQ0 159 aa5.34□□□□□ -1.55
HMGB3P18-201ENST00000406327 CCDC134Q9H6E4 229 aa5.34□□□□□ -1.55
HMGB3P18-201ENST00000406327 SUFUQ9UMX1 484 aa5.34□□□□□ -1.55
HMGB3P18-201ENST00000406327 SH2B3Q9UQQ2 575 aa5.34□□□□□ -1.55
HMGB3P18-201ENST00000406327 PRXQ9BXM0 1461 aa5.33□□□□□ -1.56
HMGB3P18-201ENST00000406327 KIF27Q86VH2 1401 aa5.33□□□□□ -1.56
HMGB3P18-201ENST00000406327 MBD3L5A6NJ08 208 aaPredicted RBP5.33□□□□□ -1.56
HMGB3P18-201ENST00000406327 GRXCR1A8MXD5 290 aa5.33□□□□□ -1.56
HMGB3P18-201ENST00000406327 KIF28PB7ZC32 967 aa5.33□□□□□ -1.56
HMGB3P18-201ENST00000406327 HNRNPRO43390 633 aaKnown RBP5.33□□□□□ -1.56
HMGB3P18-201ENST00000406327 CBFA2T3O75081 653 aa5.33□□□□□ -1.56
HMGB3P18-201ENST00000406327 NCR1O76036 304 aa5.33□□□□□ -1.56
HMGB3P18-201ENST00000406327 NXPH3O95157 252 aa5.33□□□□□ -1.56
HMGB3P18-201ENST00000406327 DDX58O95786 925 aaKnown RBP5.33□□□□□ -1.56
HMGB3P18-201ENST00000406327 TNNT1P13805 278 aa5.33□□□□□ -1.56
HMGB3P18-201ENST00000406327 CAPN3P20807 821 aa5.33□□□□□ -1.56
HMGB3P18-201ENST00000406327 DRD1P21728 446 aa5.33□□□□□ -1.56
HMGB3P18-201ENST00000406327 YY1P25490 414 aa5.33□□□□□ -1.56
HMGB3P18-201ENST00000406327 CLNS1AP54105 237 aaKnown RBP5.33□□□□□ -1.56
HMGB3P18-201ENST00000406327 SUMO2P61956 95 aaKnown RBP5.33□□□□□ -1.56
HMGB3P18-201ENST00000406327 RESTQ13127 1097 aa5.33□□□□□ -1.56
HMGB3P18-201ENST00000406327 SEMA3BQ13214 749 aa5.33□□□□□ -1.56
HMGB3P18-201ENST00000406327 BEAN1Q3B7T3 259 aa5.33□□□□□ -1.56
HMGB3P18-201ENST00000406327 GALNTL6Q49A17 601 aa5.33□□□□□ -1.56
HMGB3P18-201ENST00000406327 TMEM196Q5HYL7 178 aa5.33□□□□□ -1.56
HMGB3P18-201ENST00000406327 ZNF618Q5T7W0 954 aa5.33□□□□□ -1.56
HMGB3P18-201ENST00000406327 SLC9A4Q6AI14 798 aa5.33□□□□□ -1.56
HMGB3P18-201ENST00000406327 CCDC144NLQ6NUI1 221 aa5.33□□□□□ -1.56
HMGB3P18-201ENST00000406327 MSANTD2Q6P1R3 559 aa5.33□□□□□ -1.56
HMGB3P18-201ENST00000406327 Q6ZSN1 163 aa5.33□□□□□ -1.56
HMGB3P18-201ENST00000406327 FUBP1Q96AE4 644 aaKnown RBP5.33□□□□□ -1.56
HMGB3P18-201ENST00000406327 PIGSQ96S52 555 aa5.33□□□□□ -1.56
HMGB3P18-201ENST00000406327 REEP2Q9BRK0 252 aa5.33□□□□□ -1.56
HMGB3P18-201ENST00000406327 ZCCHC4Q9H5U6 513 aa5.33□□□□□ -1.56
HMGB3P18-201ENST00000406327 PREBQ9HCU5 417 aa5.33□□□□□ -1.56
HMGB3P18-201ENST00000406327 TBCCD1Q9NVR7 557 aa5.33□□□□□ -1.56
HMGB3P18-201ENST00000406327 PARPBPQ9NWS1 579 aa5.33□□□□□ -1.56
HMGB3P18-201ENST00000406327 ARHGAP26Q9UNA1 814 aa5.33□□□□□ -1.56
HMGB3P18-201ENST00000406327 ZBTB1Q9Y2K1 713 aa5.33□□□□□ -1.56
HMGB3P18-201ENST00000406327 LAS1LQ9Y4W2 734 aaKnown RBP5.33□□□□□ -1.56
HMGB3P18-201ENST00000406327 A1L4Q6 167 aa5.32□□□□□ -1.56
HMGB3P18-201ENST00000406327 TISP43B9A030 160 aa5.32□□□□□ -1.56
HMGB3P18-201ENST00000406327 AGPSO00116 658 aa5.32□□□□□ -1.56
HMGB3P18-201ENST00000406327 PPM1DO15297 605 aa5.32□□□□□ -1.56
HMGB3P18-201ENST00000406327 CTIFO43310 598 aaKnown RBP5.32□□□□□ -1.56
HMGB3P18-201ENST00000406327 GUCY1B2O75343 617 aa5.32□□□□□ -1.56
HMGB3P18-201ENST00000406327 ZFPL1O95159 310 aa5.32□□□□□ -1.56
HMGB3P18-201ENST00000406327 DLDP09622 509 aaKnown RBP5.32□□□□□ -1.56
HMGB3P18-201ENST00000406327 PPP3CBP16298 524 aa5.32□□□□□ -1.56
HMGB3P18-201ENST00000406327 GATA3P23771 443 aa5.32□□□□□ -1.56
HMGB3P18-201ENST00000406327 PSMC2P35998 433 aaKnown RBP5.32□□□□□ -1.56
HMGB3P18-201ENST00000406327 LIPAP38571 399 aa5.32□□□□□ -1.56
HMGB3P18-201ENST00000406327 SELENOPP49908 381 aa5.32□□□□□ -1.56
HMGB3P18-201ENST00000406327 CCR5P51681 352 aa5.32□□□□□ -1.56
HMGB3P18-201ENST00000406327 PRKD1Q15139 912 aaPredicted RBP5.32□□□□□ -1.56
HMGB3P18-201ENST00000406327 SYT13Q7L8C5 426 aa5.32□□□□□ -1.56
HMGB3P18-201ENST00000406327 RASGRP2Q7LDG7 609 aa5.32□□□□□ -1.56
HMGB3P18-201ENST00000406327 CAND1Q86VP6 1230 aaKnown RBP5.32□□□□□ -1.56
HMGB3P18-201ENST00000406327 TMPRSS6Q8IU80 811 aa5.32□□□□□ -1.56
HMGB3P18-201ENST00000406327 P3H2Q8IVL5 708 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms