RNA–Protein interactions for RNA: ENST00000405547.7

SNED1-205, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 7,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-205ENST00000405547 ALDH1A1P00352 501 aa13.73□□□□□ -0.21
SNED1-205ENST00000405547 SUPT20HL2P0C7V6 817 aa13.73□□□□□ -0.21
SNED1-205ENST00000405547 OCM2P0CE71 109 aa13.73□□□□□ -0.21
SNED1-205ENST00000405547 OCMP0CE72 109 aaPredicted RBP13.73□□□□□ -0.21
SNED1-205ENST00000405547 ITPK1Q13572 414 aa13.73□□□□□ -0.21
SNED1-205ENST00000405547 GTF2H3Q13889 308 aa13.73□□□□□ -0.21
SNED1-205ENST00000405547 OR6Y1Q8NGX8 325 aa13.73□□□□□ -0.21
SNED1-205ENST00000405547 MPP4Q96JB8 637 aa13.73□□□□□ -0.21
SNED1-205ENST00000405547 SRPK1Q96SB4 655 aaKnown RBP13.73□□□□□ -0.21
SNED1-205ENST00000405547 IL17RBQ9NRM6 502 aa13.73□□□□□ -0.21
SNED1-205ENST00000405547 TPBGLP0DKB5 382 aa13.73□□□□□ -0.21
SNED1-205ENST00000405547 GP5P40197 560 aa13.73□□□□□ -0.21
SNED1-205ENST00000405547 SKIV2L2P42285 1042 aaKnown RBP13.73□□□□□ -0.21
SNED1-205ENST00000405547 ARHGEF7Q14155 803 aa13.73□□□□□ -0.21
SNED1-205ENST00000405547 FUT11Q495W5 492 aa13.73□□□□□ -0.21
SNED1-205ENST00000405547 CROCCP3Q8IVE0 287 aa13.73□□□□□ -0.21
SNED1-205ENST00000405547 CENPLQ8N0S6 344 aaPredicted RBP13.73□□□□□ -0.21
SNED1-205ENST00000405547 TBCBQ99426 244 aa13.73□□□□□ -0.21
SNED1-205ENST00000405547 SYNDIG1LA6NDD5 238 aa13.73□□□□□ -0.21
SNED1-205ENST00000405547 BMP6P22004 513 aa13.73□□□□□ -0.21
SNED1-205ENST00000405547 XRCC4Q13426 336 aa13.73□□□□□ -0.21
SNED1-205ENST00000405547 TCHHL1Q5QJ38 904 aaPredicted RBP13.73□□□□□ -0.21
SNED1-205ENST00000405547 WDR59Q6PJI9 974 aa13.73□□□□□ -0.21
SNED1-205ENST00000405547 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.73□□□□□ -0.21
SNED1-205ENST00000405547 ZDHHC17Q8IUH5 632 aa13.73□□□□□ -0.21
SNED1-205ENST00000405547 RMND5AQ9H871 391 aa13.73□□□□□ -0.21
SNED1-205ENST00000405547 IARS2Q9NSE4 1012 aaKnown RBP13.73□□□□□ -0.21
SNED1-205ENST00000405547 ADAMTS13Q76LX8 1427 aa13.73□□□□□ -0.21
SNED1-205ENST00000405547 FRMPD4Q14CM0 1322 aa13.73□□□□□ -0.21
SNED1-205ENST00000405547 CYP2F1P24903 491 aa13.73□□□□□ -0.21
SNED1-205ENST00000405547 SLC26A2P50443 739 aa13.73□□□□□ -0.21
SNED1-205ENST00000405547 MAP3K7CLP57077 242 aa13.73□□□□□ -0.21
SNED1-205ENST00000405547 TP53BP2Q13625 1128 aa13.73□□□□□ -0.21
SNED1-205ENST00000405547 ITGA9Q13797 1035 aa13.73□□□□□ -0.21
SNED1-205ENST00000405547 ACOT1Q86TX2 421 aa13.73□□□□□ -0.21
SNED1-205ENST00000405547 DLG3Q92796 817 aa13.73□□□□□ -0.21
SNED1-205ENST00000405547 CPNE1Q99829 537 aa13.73□□□□□ -0.21
SNED1-205ENST00000405547 TMEM39BQ9GZU3 492 aa13.73□□□□□ -0.21
SNED1-205ENST00000405547 LTN1O94822 1766 aa13.73□□□□□ -0.21
SNED1-205ENST00000405547 UBDO15205 165 aa13.73□□□□□ -0.21
SNED1-205ENST00000405547 CYTH3O43739 400 aa13.73□□□□□ -0.21
SNED1-205ENST00000405547 PPP3CCP48454 512 aa13.73□□□□□ -0.21
SNED1-205ENST00000405547 NAB1Q13506 487 aa13.73□□□□□ -0.21
SNED1-205ENST00000405547 ZNF512Q96ME7 567 aaPredicted RBP13.73□□□□□ -0.21
SNED1-205ENST00000405547 ANKRD6Q9Y2G4 727 aa13.73□□□□□ -0.21
SNED1-205ENST00000405547 NR5A2O00482 541 aa13.72□□□□□ -0.21
SNED1-205ENST00000405547 VPS26AO75436 327 aa13.72□□□□□ -0.21
SNED1-205ENST00000405547 SPANXN3Q5MJ09 141 aa13.72□□□□□ -0.21
SNED1-205ENST00000405547 N4BP2L1Q5TBK1 243 aaPredicted RBP13.72□□□□□ -0.21
SNED1-205ENST00000405547 RMND5BQ96G75 393 aaPredicted RBP13.72□□□□□ -0.21
SNED1-205ENST00000405547 ABHD8Q96I13 439 aa13.72□□□□□ -0.21
SNED1-205ENST00000405547 WWOXQ9NZC7 414 aa13.72□□□□□ -0.21
SNED1-205ENST00000405547 FER1L4A9Z1Z3 1794 aa13.72□□□□□ -0.21
SNED1-205ENST00000405547 ODC1P11926 461 aa13.72□□□□□ -0.21
SNED1-205ENST00000405547 PAX7P23759 505 aa13.72□□□□□ -0.21
SNED1-205ENST00000405547 PNMA5Q96PV4 448 aa13.72□□□□□ -0.21
SNED1-205ENST00000405547 SYTL2Q9HCH5 934 aa13.72□□□□□ -0.21
SNED1-205ENST00000405547 FBXO28Q9NVF7 368 aa13.72□□□□□ -0.21
SNED1-205ENST00000405547 INTS13Q9NVM9 706 aa13.72□□□□□ -0.21
SNED1-205ENST00000405547 COMMD8Q9NX08 183 aa13.72□□□□□ -0.21
SNED1-205ENST00000405547 DNPEPQ9ULA0 475 aa13.72□□□□□ -0.21
SNED1-205ENST00000405547 MYRFQ9Y2G1 1151 aa13.72□□□□□ -0.21
SNED1-205ENST00000405547 NPTXRO95502 500 aa13.72□□□□□ -0.21
SNED1-205ENST00000405547 PECAM1P16284 738 aaPredicted RBP13.72□□□□□ -0.21
SNED1-205ENST00000405547 ME2P23368 584 aa13.72□□□□□ -0.21
SNED1-205ENST00000405547 NFYCQ13952 458 aa13.72□□□□□ -0.21
SNED1-205ENST00000405547 ZNF268Q14587 947 aaPredicted RBP13.72□□□□□ -0.21
SNED1-205ENST00000405547 GALNTL6Q49A17 601 aa13.72□□□□□ -0.21
SNED1-205ENST00000405547 ATP6V0D2Q8N8Y2 350 aa13.72□□□□□ -0.21
SNED1-205ENST00000405547 COLGALT1Q8NBJ5 622 aa13.72□□□□□ -0.21
SNED1-205ENST00000405547 SNTNA6NMZ2 147 aa13.72□□□□□ -0.21
SNED1-205ENST00000405547 FBXO21O94952 628 aa13.72□□□□□ -0.21
SNED1-205ENST00000405547 NUDT17P0C025 328 aa13.72□□□□□ -0.21
SNED1-205ENST00000405547 RRP1BQ14684 758 aaKnown RBP13.72□□□□□ -0.21
SNED1-205ENST00000405547 CCDC142Q17RM4 750 aa13.72□□□□□ -0.21
SNED1-205ENST00000405547 INTS5Q6P9B9 1019 aaKnown RBP13.72□□□□□ -0.21
SNED1-205ENST00000405547 OTOP1Q7RTM1 612 aa13.72□□□□□ -0.21
SNED1-205ENST00000405547 KLHL25Q9H0H3 589 aa13.72□□□□□ -0.21
SNED1-205ENST00000405547 TMEM51Q9NW97 253 aa13.72□□□□□ -0.21
SNED1-205ENST00000405547 RPL10AP62906 217 aaKnown RBP13.72□□□□□ -0.21
SNED1-205ENST00000405547 TMEM62Q0P6H9 643 aa13.72□□□□□ -0.21
SNED1-205ENST00000405547 CYP51A1Q16850 503 aa13.72□□□□□ -0.21
SNED1-205ENST00000405547 FOXR2Q6PJQ5 311 aa13.72□□□□□ -0.21
SNED1-205ENST00000405547 DCP1BQ8IZD4 617 aaKnown RBP13.72□□□□□ -0.21
SNED1-205ENST00000405547 COPG2Q9UBF2 871 aa13.72□□□□□ -0.21
SNED1-205ENST00000405547 CCDC88AQ3V6T2 1871 aa13.72□□□□□ -0.21
SNED1-205ENST00000405547 AFF2P51816 1311 aa13.72□□□□□ -0.21
SNED1-205ENST00000405547 RGS2P41220 211 aa13.72□□□□□ -0.21
SNED1-205ENST00000405547 STYK1Q6J9G0 422 aa13.72□□□□□ -0.21
SNED1-205ENST00000405547 APOL5Q9BWW9 433 aa13.72□□□□□ -0.21
SNED1-205ENST00000405547 BTBD7Q9P203 1132 aa13.72□□□□□ -0.21
SNED1-205ENST00000405547 TRIM13O60858 407 aa13.71□□□□□ -0.21
SNED1-205ENST00000405547 CBX6O95503 412 aa13.71□□□□□ -0.21
SNED1-205ENST00000405547 KLRK1P26718 216 aa13.71□□□□□ -0.21
SNED1-205ENST00000405547 CRABP2P29373 138 aa13.71□□□□□ -0.21
SNED1-205ENST00000405547 HNRNPH3P31942 346 aaKnown RBP13.71□□□□□ -0.21
SNED1-205ENST00000405547 PPIDQ08752 370 aaKnown RBP13.71□□□□□ -0.21
SNED1-205ENST00000405547 PKN2Q16513 984 aaKnown RBP13.71□□□□□ -0.21
SNED1-205ENST00000405547 ADGRA1Q86SQ6 560 aa13.71□□□□□ -0.21
SNED1-205ENST00000405547 BLOC1S5Q8TDH9 187 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms