RNA–Protein interactions for RNA: ENST00000404354.3

SMC1B-202, Transcript of structural maintenance of chromosomes 1B, humanhuman

TSL 1 (best) BASIC

Gene SMC1B, Length 3,636 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-202ENST00000404354 ARPINQ7Z6K5 226 aa9.91□□□□□ -0.82
SMC1B-202ENST00000404354 CHSY1Q86X52 802 aa9.91□□□□□ -0.82
SMC1B-202ENST00000404354 ADGRF2Q8IZF7 708 aa9.91□□□□□ -0.82
SMC1B-202ENST00000404354 ICA1LQ8NDH6 482 aa9.91□□□□□ -0.82
SMC1B-202ENST00000404354 PDCD2LQ9BRP1 358 aa9.91□□□□□ -0.82
SMC1B-202ENST00000404354 CYP26B1Q9NR63 512 aa9.91□□□□□ -0.82
SMC1B-202ENST00000404354 HMGXB4Q9UGU5 601 aa9.91□□□□□ -0.82
SMC1B-202ENST00000404354 SIN3BO75182 1162 aa9.91□□□□□ -0.82
SMC1B-202ENST00000404354 TGDSO95455 350 aa9.91□□□□□ -0.82
SMC1B-202ENST00000404354 ZBED1O96006 694 aa9.91□□□□□ -0.82
SMC1B-202ENST00000404354 AMHP03971 560 aa9.91□□□□□ -0.82
SMC1B-202ENST00000404354 HMGCRP04035 888 aa9.91□□□□□ -0.82
SMC1B-202ENST00000404354 GJB1P08034 283 aa9.91□□□□□ -0.82
SMC1B-202ENST00000404354 UQCRBP14927 111 aa9.91□□□□□ -0.82
SMC1B-202ENST00000404354 CPOXP36551 454 aa9.91□□□□□ -0.82
SMC1B-202ENST00000404354 OLIG2Q13516 323 aa9.91□□□□□ -0.82
SMC1B-202ENST00000404354 KRT81Q14533 505 aa9.91□□□□□ -0.82
SMC1B-202ENST00000404354 GSTA3Q16772 222 aa9.91□□□□□ -0.82
SMC1B-202ENST00000404354 DRICH1Q6PGQ1 229 aaPredicted RBP9.91□□□□□ -0.82
SMC1B-202ENST00000404354 UNC5AQ6ZN44 842 aa9.91□□□□□ -0.82
SMC1B-202ENST00000404354 BBS12Q6ZW61 710 aa9.91□□□□□ -0.82
SMC1B-202ENST00000404354 SDCCAG8Q86SQ7 713 aaPredicted RBP9.91□□□□□ -0.82
SMC1B-202ENST00000404354 WDR75Q8IWA0 830 aaKnown RBP9.91□□□□□ -0.82
SMC1B-202ENST00000404354 CLMNQ96JQ2 1002 aa9.91□□□□□ -0.82
SMC1B-202ENST00000404354 PEBP4Q96S96 227 aa9.91□□□□□ -0.82
SMC1B-202ENST00000404354 RNF19AQ9NV58 838 aa9.91□□□□□ -0.82
SMC1B-202ENST00000404354 USP18Q9UMW8 372 aa9.91□□□□□ -0.82
SMC1B-202ENST00000404354 POMPQ9Y244 141 aa9.91□□□□□ -0.82
SMC1B-202ENST00000404354 TDRKHQ9Y2W6 561 aaKnown RBP9.91□□□□□ -0.82
SMC1B-202ENST00000404354 TTLL3Q9Y4R7 772 aa9.91□□□□□ -0.82
SMC1B-202ENST00000404354 AHDC1Q5TGY3 1603 aaPredicted RBP9.91□□□□□ -0.82
SMC1B-202ENST00000404354 HMX2A2RU54 273 aa9.9□□□□□ -0.82
SMC1B-202ENST00000404354 F8W8V4 182 aa9.9□□□□□ -0.82
SMC1B-202ENST00000404354 STX16-NPEPL1H3BU86 382 aa9.9□□□□□ -0.82
SMC1B-202ENST00000404354 NOP56O00567 594 aaKnown RBP9.9□□□□□ -0.82
SMC1B-202ENST00000404354 PMM2O15305 246 aa9.9□□□□□ -0.82
SMC1B-202ENST00000404354 FOXD2O60548 495 aaPredicted RBP9.9□□□□□ -0.82
SMC1B-202ENST00000404354 ICAM1P05362 532 aa9.9□□□□□ -0.82
SMC1B-202ENST00000404354 OSBPP22059 807 aa9.9□□□□□ -0.82
SMC1B-202ENST00000404354 PHKA2P46019 1235 aa9.9□□□□□ -0.82
SMC1B-202ENST00000404354 TBL3Q12788 808 aaKnown RBP9.9□□□□□ -0.82
SMC1B-202ENST00000404354 LSAMPQ13449 338 aa9.9□□□□□ -0.82
SMC1B-202ENST00000404354 ITGA9Q13797 1035 aa9.9□□□□□ -0.82
SMC1B-202ENST00000404354 R3HDM1Q15032 1099 aaKnown RBP9.9□□□□□ -0.82
SMC1B-202ENST00000404354 SPDYAQ5MJ70 313 aa9.9□□□□□ -0.82
SMC1B-202ENST00000404354 C6orf52Q5T4I8 152 aa9.9□□□□□ -0.82
SMC1B-202ENST00000404354 LARGE2Q8N3Y3 721 aa9.9□□□□□ -0.82
SMC1B-202ENST00000404354 ZSCAN18Q8TBC5 510 aaPredicted RBP9.9□□□□□ -0.82
SMC1B-202ENST00000404354 ST6GALNAC4Q9H4F1 302 aa9.9□□□□□ -0.82
SMC1B-202ENST00000404354 COPS7BQ9H9Q2 264 aaPredicted RBP9.9□□□□□ -0.82
SMC1B-202ENST00000404354 STK32BQ9NY57 414 aa9.9□□□□□ -0.82
SMC1B-202ENST00000404354 DDX56Q9NY93 547 aaKnown RBP9.9□□□□□ -0.82
SMC1B-202ENST00000404354 UBAP1Q9NZ09 502 aa9.9□□□□□ -0.82
SMC1B-202ENST00000404354 ADCY6O43306 1168 aa9.9□□□□□ -0.82
SMC1B-202ENST00000404354 ERBB2P04626 1255 aa9.9□□□□□ -0.82
SMC1B-202ENST00000404354 GARTP22102 1010 aa9.9□□□□□ -0.82
SMC1B-202ENST00000404354 PCSK6P29122 969 aa9.9□□□□□ -0.82
SMC1B-202ENST00000404354 ARRB2P32121 409 aa9.9□□□□□ -0.82
SMC1B-202ENST00000404354 CCR10P46092 362 aa9.9□□□□□ -0.82
SMC1B-202ENST00000404354 SLC1A6P48664 564 aa9.9□□□□□ -0.82
SMC1B-202ENST00000404354 MAP7Q14244 749 aa9.9□□□□□ -0.82
SMC1B-202ENST00000404354 PPM1LQ5SGD2 360 aa9.9□□□□□ -0.82
SMC1B-202ENST00000404354 CMC1Q7Z7K0 106 aa9.9□□□□□ -0.82
SMC1B-202ENST00000404354 C10orf107Q8IVU9 208 aa9.9□□□□□ -0.82
SMC1B-202ENST00000404354 VCPIP1Q96JH7 1222 aa9.9□□□□□ -0.82
SMC1B-202ENST00000404354 WDR55Q9H6Y2 383 aaPredicted RBP9.9□□□□□ -0.82
SMC1B-202ENST00000404354 SSU72Q9NP77 194 aaKnown RBP9.9□□□□□ -0.82
SMC1B-202ENST00000404354 CDH22Q9UJ99 828 aa9.9□□□□□ -0.82
SMC1B-202ENST00000404354 LZTS1Q9Y250 596 aa9.9□□□□□ -0.82
SMC1B-202ENST00000404354 COL14A1Q05707 1796 aaKnown RBP9.9□□□□□ -0.82
SMC1B-202ENST00000404354 XPO1O14980 1071 aaKnown RBP9.9□□□□□ -0.83
SMC1B-202ENST00000404354 ZC3H11AO75152 810 aaKnown RBP eCLIP9.9□□□□□ -0.83
SMC1B-202ENST00000404354 CLPTM1O96005 669 aa9.9□□□□□ -0.83
SMC1B-202ENST00000404354 BPGMP07738 259 aa9.9□□□□□ -0.83
SMC1B-202ENST00000404354 RPL10P27635 214 aaKnown RBP9.9□□□□□ -0.83
SMC1B-202ENST00000404354 HSD17B4P51659 736 aa9.9□□□□□ -0.83
SMC1B-202ENST00000404354 EMC2Q15006 297 aa9.9□□□□□ -0.83
SMC1B-202ENST00000404354 CNGA3Q16281 694 aa9.9□□□□□ -0.83
SMC1B-202ENST00000404354 NRF1Q16656 503 aa9.9□□□□□ -0.83
SMC1B-202ENST00000404354 NADK2Q4G0N4 442 aa9.9□□□□□ -0.83
SMC1B-202ENST00000404354 STRIP1Q5VSL9 837 aa9.9□□□□□ -0.83
SMC1B-202ENST00000404354 OR6B2Q6IFH4 312 aa9.9□□□□□ -0.83
SMC1B-202ENST00000404354 ACAD11Q709F0 780 aa9.9□□□□□ -0.83
SMC1B-202ENST00000404354 NME8Q8N427 588 aa9.9□□□□□ -0.83
SMC1B-202ENST00000404354 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.9□□□□□ -0.83
SMC1B-202ENST00000404354 AZIN2Q96A70 460 aa9.9□□□□□ -0.83
SMC1B-202ENST00000404354 PLAC1Q9HBJ0 212 aa9.9□□□□□ -0.83
SMC1B-202ENST00000404354 DNAAF2Q9NVR5 837 aaKnown RBP9.9□□□□□ -0.83
SMC1B-202ENST00000404354 DDX43Q9NXZ2 648 aaKnown RBP9.9□□□□□ -0.83
SMC1B-202ENST00000404354 ATXN10Q9UBB4 475 aa9.9□□□□□ -0.83
SMC1B-202ENST00000404354 DTNAQ9Y4J8 743 aa9.9□□□□□ -0.83
SMC1B-202ENST00000404354 SPDYE2BA6NHP3 402 aa9.89□□□□□ -0.83
SMC1B-202ENST00000404354 E7ESA3 106 aa9.89□□□□□ -0.83
SMC1B-202ENST00000404354 TBC1D12O60347 775 aa9.89□□□□□ -0.83
SMC1B-202ENST00000404354 METTL18O95568 372 aa9.89□□□□□ -0.83
SMC1B-202ENST00000404354 SERPINA6P08185 405 aa9.89□□□□□ -0.83
SMC1B-202ENST00000404354 NR3C2P08235 984 aa9.89□□□□□ -0.83
SMC1B-202ENST00000404354 KRT7P08729 469 aa9.89□□□□□ -0.83
SMC1B-202ENST00000404354 MMP10P09238 476 aa9.89□□□□□ -0.83
SMC1B-202ENST00000404354 SPDYE6P0CI01 402 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms