RNA–Protein interactions for RNA: ENST00000402314.6

ATG3-202, Transcript of autophagy related 3, humanhuman

TSL 1 (best) BASIC

Gene ATG3, Length 3,010 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-202ENST00000402314 RASSF3Q86WH2 238 aa14.65□□□□□ -0.06
ATG3-202ENST00000402314 ARID3BQ8IVW6 561 aaPredicted RBP14.65□□□□□ -0.06
ATG3-202ENST00000402314 ITFG2Q969R8 447 aa14.65□□□□□ -0.06
ATG3-202ENST00000402314 ACAP3Q96P50 834 aa14.65□□□□□ -0.06
ATG3-202ENST00000402314 TRAPPC9Q96Q05 1148 aa14.65□□□□□ -0.06
ATG3-202ENST00000402314 IFT122Q9HBG6 1241 aa14.65□□□□□ -0.06
ATG3-202ENST00000402314 ACTL7BQ9Y614 415 aa14.65□□□□□ -0.06
ATG3-202ENST00000402314 AVILO75366 819 aa14.64□□□□□ -0.07
ATG3-202ENST00000402314 ZWINTO95229 277 aa14.64□□□□□ -0.07
ATG3-202ENST00000402314 GSTA2P09210 222 aa14.64□□□□□ -0.07
ATG3-202ENST00000402314 CYP2C8P10632 490 aa14.64□□□□□ -0.07
ATG3-202ENST00000402314 DSG1Q02413 1049 aa14.64□□□□□ -0.07
ATG3-202ENST00000402314 PTPN11Q06124 597 aaPredicted RBP14.64□□□□□ -0.07
ATG3-202ENST00000402314 UBAP2LQ14157 1087 aaKnown RBP14.64□□□□□ -0.07
ATG3-202ENST00000402314 HIF1AQ16665 826 aa14.64□□□□□ -0.07
ATG3-202ENST00000402314 LIN52Q52LA3 116 aa14.64□□□□□ -0.07
ATG3-202ENST00000402314 FAXCQ5TGI0 409 aa14.64□□□□□ -0.07
ATG3-202ENST00000402314 ZCCHC23Q6ZST2 131 aa14.64□□□□□ -0.07
ATG3-202ENST00000402314 IGDCC3Q8IVU1 814 aa14.64□□□□□ -0.07
ATG3-202ENST00000402314 OXNAD1Q96HP4 312 aaPredicted RBP14.64□□□□□ -0.07
ATG3-202ENST00000402314 ECSITQ9BQ95 431 aa14.64□□□□□ -0.07
ATG3-202ENST00000402314 MAGEB5Q9BZ81 275 aa14.64□□□□□ -0.07
ATG3-202ENST00000402314 TLE6Q9H808 572 aa14.64□□□□□ -0.07
ATG3-202ENST00000402314 NDE1Q9NXR1 346 aa14.64□□□□□ -0.07
ATG3-202ENST00000402314 PCDHGC3Q9UN70 934 aa14.64□□□□□ -0.07
ATG3-202ENST00000402314 TOP3BO95985 862 aaKnown RBP14.64□□□□□ -0.07
ATG3-202ENST00000402314 CYP3A5P20815 502 aa14.64□□□□□ -0.07
ATG3-202ENST00000402314 YWHAEP62258 255 aaKnown RBP14.64□□□□□ -0.07
ATG3-202ENST00000402314 SLC25A3Q00325 362 aa14.64□□□□□ -0.07
ATG3-202ENST00000402314 LMNB2Q03252 620 aa14.64□□□□□ -0.07
ATG3-202ENST00000402314 TMEM62Q0P6H9 643 aa14.64□□□□□ -0.07
ATG3-202ENST00000402314 CDC16Q13042 620 aa14.64□□□□□ -0.07
ATG3-202ENST00000402314 KCTD2Q14681 263 aa14.64□□□□□ -0.07
ATG3-202ENST00000402314 LRRC38Q5VT99 294 aa14.64□□□□□ -0.07
ATG3-202ENST00000402314 PALM2Q8IXS6 379 aa14.64□□□□□ -0.07
ATG3-202ENST00000402314 RSAD2Q8WXG1 361 aa14.64□□□□□ -0.07
ATG3-202ENST00000402314 NKD2Q969F2 451 aaPredicted RBP14.64□□□□□ -0.07
ATG3-202ENST00000402314 FAM167AQ96KS9 214 aa14.64□□□□□ -0.07
ATG3-202ENST00000402314 SAR1AQ9NR31 198 aa14.64□□□□□ -0.07
ATG3-202ENST00000402314 AKT3Q9Y243 479 aa14.64□□□□□ -0.07
ATG3-202ENST00000402314 SLC4A7Q9Y6M7 1214 aa14.64□□□□□ -0.07
ATG3-202ENST00000402314 HCRTO43612 131 aa14.63□□□□□ -0.07
ATG3-202ENST00000402314 B4GALT4O60513 344 aa14.63□□□□□ -0.07
ATG3-202ENST00000402314 MT-ND3P03897 115 aa14.63□□□□□ -0.07
ATG3-202ENST00000402314 GRIA2P42262 883 aa14.63□□□□□ -0.07
ATG3-202ENST00000402314 AP3M2P53677 418 aa14.63□□□□□ -0.07
ATG3-202ENST00000402314 GEMIN4P57678 1058 aaKnown RBP14.63□□□□□ -0.07
ATG3-202ENST00000402314 CDK16Q00536 496 aa14.63□□□□□ -0.07
ATG3-202ENST00000402314 C1orf228Q6PIY5 440 aa14.63□□□□□ -0.07
ATG3-202ENST00000402314 SULF1Q8IWU6 871 aa14.63□□□□□ -0.07
ATG3-202ENST00000402314 CTAGE3PQ8IX95 158 aa14.63□□□□□ -0.07
ATG3-202ENST00000402314 SLC26A7Q8TE54 656 aa14.63□□□□□ -0.07
ATG3-202ENST00000402314 SERAC1Q96JX3 654 aa14.63□□□□□ -0.07
ATG3-202ENST00000402314 MMP19Q99542 508 aa14.63□□□□□ -0.07
ATG3-202ENST00000402314 PCDH9Q9HC56 1237 aa14.63□□□□□ -0.07
ATG3-202ENST00000402314 DMAP1Q9NPF5 467 aaPredicted RBP14.63□□□□□ -0.07
ATG3-202ENST00000402314 ALOX15BO15296 676 aa14.63□□□□□ -0.07
ATG3-202ENST00000402314 PFDN1O60925 122 aa14.63□□□□□ -0.07
ATG3-202ENST00000402314 ITGAVP06756 1048 aa14.63□□□□□ -0.07
ATG3-202ENST00000402314 CDH5P33151 784 aaPredicted RBP14.63□□□□□ -0.07
ATG3-202ENST00000402314 MORF4L2Q15014 288 aa14.63□□□□□ -0.07
ATG3-202ENST00000402314 SCYL2Q6P3W7 929 aa14.63□□□□□ -0.07
ATG3-202ENST00000402314 PAOXQ6QHF9 649 aa14.63□□□□□ -0.07
ATG3-202ENST00000402314 CENPUQ71F23 418 aa14.63□□□□□ -0.07
ATG3-202ENST00000402314 PRPF39Q86UA1 669 aaKnown RBP14.63□□□□□ -0.07
ATG3-202ENST00000402314 SCUBE1Q8IWY4 988 aa14.63□□□□□ -0.07
ATG3-202ENST00000402314 FBXO36Q8NEA4 188 aa14.63□□□□□ -0.07
ATG3-202ENST00000402314 MPP4Q96JB8 637 aa14.63□□□□□ -0.07
ATG3-202ENST00000402314 SLC7A8Q9UHI5 535 aa14.63□□□□□ -0.07
ATG3-202ENST00000402314 RBP3P10745 1247 aa14.63□□□□□ -0.07
ATG3-202ENST00000402314 RARBP10826 455 aa14.63□□□□□ -0.07
ATG3-202ENST00000402314 EIF3EP60228 445 aaKnown RBP14.63□□□□□ -0.07
ATG3-202ENST00000402314 SLC10A6Q3KNW5 377 aa14.63□□□□□ -0.07
ATG3-202ENST00000402314 CDHR3Q6ZTQ4 885 aa14.63□□□□□ -0.07
ATG3-202ENST00000402314 GPC2Q8N158 579 aa14.63□□□□□ -0.07
ATG3-202ENST00000402314 SPATA18Q8TC71 538 aa14.63□□□□□ -0.07
ATG3-202ENST00000402314 HIC2Q96JB3 615 aa14.63□□□□□ -0.07
ATG3-202ENST00000402314 ZNF518BQ9C0D4 1074 aa14.63□□□□□ -0.07
ATG3-202ENST00000402314 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.63□□□□□ -0.07
ATG3-202ENST00000402314 PDP2Q9P2J9 529 aa14.63□□□□□ -0.07
ATG3-202ENST00000402314 RABGEF1Q9UJ41 708 aa14.63□□□□□ -0.07
ATG3-202ENST00000402314 USP18Q9UMW8 372 aa14.63□□□□□ -0.07
ATG3-202ENST00000402314 DRG1Q9Y295 367 aaKnown RBP14.63□□□□□ -0.07
ATG3-202ENST00000402314 PPEF2O14830 753 aa14.62□□□□□ -0.07
ATG3-202ENST00000402314 ATP6V1B1P15313 513 aa14.62□□□□□ -0.07
ATG3-202ENST00000402314 ATXN3P54252 364 aaPredicted RBP14.62□□□□□ -0.07
ATG3-202ENST00000402314 CDH6P55285 790 aa14.62□□□□□ -0.07
ATG3-202ENST00000402314 DYNC1I2Q13409 638 aaKnown RBP14.62□□□□□ -0.07
ATG3-202ENST00000402314 AMHR2Q16671 573 aa14.62□□□□□ -0.07
ATG3-202ENST00000402314 OR6B2Q6IFH4 312 aa14.62□□□□□ -0.07
ATG3-202ENST00000402314 DRICH1Q6PGQ1 229 aaPredicted RBP14.62□□□□□ -0.07
ATG3-202ENST00000402314 RELL1Q8IUW5 271 aa14.62□□□□□ -0.07
ATG3-202ENST00000402314 ZNF276Q8N554 614 aa14.62□□□□□ -0.07
ATG3-202ENST00000402314 CCDC110Q8TBZ0 833 aa14.62□□□□□ -0.07
ATG3-202ENST00000402314 KCNN1Q92952 543 aa14.62□□□□□ -0.07
ATG3-202ENST00000402314 MTBPQ96DY7 904 aa14.62□□□□□ -0.07
ATG3-202ENST00000402314 TRIM56Q9BRZ2 755 aaKnown RBP14.62□□□□□ -0.07
ATG3-202ENST00000402314 ARHGEF4Q9NR80 690 aa14.62□□□□□ -0.07
ATG3-202ENST00000402314 FAM49BQ9NUQ9 324 aa14.62□□□□□ -0.07
ATG3-202ENST00000402314 DDX56Q9NY93 547 aaKnown RBP14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms