RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 GBP2P32456 591 aaPredicted RBP16.67■□□□□ 0.26
HMGA1-204ENST00000401473 ATP5C1P36542 298 aaKnown RBP16.67■□□□□ 0.26
HMGA1-204ENST00000401473 SCNN1AP37088 669 aa16.67■□□□□ 0.26
HMGA1-204ENST00000401473 ARHGAP15Q53QZ3 475 aa16.67■□□□□ 0.26
HMGA1-204ENST00000401473 FAM78AQ5JUQ0 283 aa16.67■□□□□ 0.26
HMGA1-204ENST00000401473 ZSCAN18Q8TBC5 510 aaPredicted RBP16.67■□□□□ 0.26
HMGA1-204ENST00000401473 ZNF653Q96CK0 615 aa16.67■□□□□ 0.26
HMGA1-204ENST00000401473 ASB16Q96NS5 453 aa16.67■□□□□ 0.26
HMGA1-204ENST00000401473 TRIM7Q9C029 511 aa16.67■□□□□ 0.26
HMGA1-204ENST00000401473 KCNF1Q9H3M0 494 aa16.67■□□□□ 0.26
HMGA1-204ENST00000401473 GKN1Q9NS71 199 aa16.67■□□□□ 0.26
HMGA1-204ENST00000401473 CALCOCO1Q9P1Z2 691 aa16.67■□□□□ 0.26
HMGA1-204ENST00000401473 MYO1AQ9UBC5 1043 aa16.67■□□□□ 0.26
HMGA1-204ENST00000401473 SFMBT1Q9UHJ3 866 aa16.67■□□□□ 0.26
HMGA1-204ENST00000401473 FAM50BQ9Y247 325 aa16.67■□□□□ 0.26
HMGA1-204ENST00000401473 USTQ9Y2C2 406 aa16.67■□□□□ 0.26
HMGA1-204ENST00000401473 RCCD1A6NED2 376 aa16.67■□□□□ 0.26
HMGA1-204ENST00000401473 C2CD4DB7Z1M9 353 aa16.67■□□□□ 0.26
HMGA1-204ENST00000401473 PRAMEF12O95522 483 aa16.67■□□□□ 0.26
HMGA1-204ENST00000401473 H2AFZP0C0S5 128 aa16.67■□□□□ 0.26
HMGA1-204ENST00000401473 RALAP11233 206 aa16.67■□□□□ 0.26
HMGA1-204ENST00000401473 DDX6P26196 483 aaKnown RBP eCLIP16.67■□□□□ 0.262e-10■□□□□ 8.7
HMGA1-204ENST00000401473 GPC5P78333 572 aa16.67■□□□□ 0.26
HMGA1-204ENST00000401473 ZP2Q05996 745 aa16.67■□□□□ 0.26
HMGA1-204ENST00000401473 C10orf120Q5SQS8 335 aa16.67■□□□□ 0.26
HMGA1-204ENST00000401473 KLHDC10Q6PID8 442 aa16.67■□□□□ 0.26
HMGA1-204ENST00000401473 H2AFVQ71UI9 128 aa16.67■□□□□ 0.26
HMGA1-204ENST00000401473 BEND5Q7L4P6 421 aa16.67■□□□□ 0.26
HMGA1-204ENST00000401473 ACRBPQ8NEB7 543 aa16.67■□□□□ 0.26
HMGA1-204ENST00000401473 ZFRQ96KR1 1074 aaKnown RBP16.67■□□□□ 0.26
HMGA1-204ENST00000401473 NECAB3Q96P71 396 aaPredicted RBP16.67■□□□□ 0.26
HMGA1-204ENST00000401473 LRRC3BQ96PB8 259 aa16.67■□□□□ 0.26
HMGA1-204ENST00000401473 PARVAQ9NVD7 372 aa16.67■□□□□ 0.26
HMGA1-204ENST00000401473 PCDHA13Q9Y5I0 950 aa16.67■□□□□ 0.26
HMGA1-204ENST00000401473 SOBPA7XYQ1 873 aa16.66■□□□□ 0.26
HMGA1-204ENST00000401473 CAPN9O14815 690 aa16.66■□□□□ 0.26
HMGA1-204ENST00000401473 CKMP06732 381 aa16.66■□□□□ 0.26
HMGA1-204ENST00000401473 MAGEA1P43355 309 aa16.66■□□□□ 0.26
HMGA1-204ENST00000401473 CCDC173Q0VFZ6 552 aa16.66■□□□□ 0.26
HMGA1-204ENST00000401473 EFEMP1Q12805 493 aa16.66■□□□□ 0.26
HMGA1-204ENST00000401473 ARCQ7LC44 396 aa16.66■□□□□ 0.26
HMGA1-204ENST00000401473 ADHFE1Q8IWW8 467 aa16.66■□□□□ 0.26
HMGA1-204ENST00000401473 CCDC112Q8NEF3 446 aa16.66■□□□□ 0.26
HMGA1-204ENST00000401473 RIN3Q8TB24 985 aa16.66■□□□□ 0.26
HMGA1-204ENST00000401473 ADAM32Q8TC27 787 aa16.66■□□□□ 0.26
HMGA1-204ENST00000401473 ADAMTS19Q8TE59 1207 aa16.66■□□□□ 0.26
HMGA1-204ENST00000401473 GOLGA1Q92805 767 aa16.66■□□□□ 0.26
HMGA1-204ENST00000401473 USP13Q92995 863 aaPredicted RBP16.66■□□□□ 0.26
HMGA1-204ENST00000401473 NT5C3BQ969T7 300 aa16.66■□□□□ 0.26
HMGA1-204ENST00000401473 DESI2Q9BSY9 194 aa16.66■□□□□ 0.26
HMGA1-204ENST00000401473 SELENOOQ9BVL4 669 aa16.66■□□□□ 0.26
HMGA1-204ENST00000401473 TRAV19A0A0A6YYK7 116 aa16.65■□□□□ 0.26
HMGA1-204ENST00000401473 A0A0U1RQJ8 604 aa16.65■□□□□ 0.26
HMGA1-204ENST00000401473 C2CD4BA6NLJ0 364 aa16.65■□□□□ 0.26
HMGA1-204ENST00000401473 CYP1A2P05177 515 aa16.65■□□□□ 0.26
HMGA1-204ENST00000401473 PTMAP06454 111 aaKnown RBP16.65■□□□□ 0.26
HMGA1-204ENST00000401473 MYBL1P10243 752 aa16.65■□□□□ 0.26
HMGA1-204ENST00000401473 NOS2P35228 1153 aa16.65■□□□□ 0.26
HMGA1-204ENST00000401473 AVPR1AP37288 418 aa16.65■□□□□ 0.26
HMGA1-204ENST00000401473 VIPR2P41587 438 aa16.65■□□□□ 0.26
HMGA1-204ENST00000401473 MATKP42679 507 aa16.65■□□□□ 0.26
HMGA1-204ENST00000401473 OGDHQ02218 1023 aa16.65■□□□□ 0.26
HMGA1-204ENST00000401473 EIF4EBP2Q13542 120 aaPredicted RBP16.65■□□□□ 0.26
HMGA1-204ENST00000401473 DNAJC24Q6P3W2 148 aa16.65■□□□□ 0.26
HMGA1-204ENST00000401473 RSRC2Q7L4I2 434 aaKnown RBP16.65■□□□□ 0.26
HMGA1-204ENST00000401473 OTOP3Q7RTS5 596 aa16.65■□□□□ 0.26
HMGA1-204ENST00000401473 MIB1Q86YT6 1006 aa16.65■□□□□ 0.26
HMGA1-204ENST00000401473 RNF139Q8WU17 664 aa16.65■□□□□ 0.26
HMGA1-204ENST00000401473 RXFP2Q8WXD0 754 aa16.65■□□□□ 0.26
HMGA1-204ENST00000401473 ATRIPQ8WXE1 791 aa16.65■□□□□ 0.26
HMGA1-204ENST00000401473 FGF14Q92915 247 aa16.65■□□□□ 0.26
HMGA1-204ENST00000401473 RSPRY1Q96DX4 576 aa16.65■□□□□ 0.26
HMGA1-204ENST00000401473 CFAP57Q96MR6 1250 aa16.65■□□□□ 0.26
HMGA1-204ENST00000401473 MCEEQ96PE7 176 aa16.65■□□□□ 0.26
HMGA1-204ENST00000401473 RPP25Q9BUL9 199 aaKnown RBP16.65■□□□□ 0.26
HMGA1-204ENST00000401473 DDX23Q9BUQ8 820 aaKnown RBP16.65■□□□□ 0.26
HMGA1-204ENST00000401473 CD320Q9NPF0 282 aa16.65■□□□□ 0.26
HMGA1-204ENST00000401473 TDP1Q9NUW8 608 aa16.65■□□□□ 0.26
HMGA1-204ENST00000401473 SMPD4Q9NXE4 827 aa16.65■□□□□ 0.26
HMGA1-204ENST00000401473 DNMT3LQ9UJW3 386 aa16.65■□□□□ 0.26
HMGA1-204ENST00000401473 LOC730098B7Z3J9 87 aa16.65■□□□□ 0.26
HMGA1-204ENST00000401473 ARHGAP6O43182 974 aa16.65■□□□□ 0.26
HMGA1-204ENST00000401473 PFKLP17858 780 aa16.65■□□□□ 0.26
HMGA1-204ENST00000401473 FCARP24071 287 aa16.65■□□□□ 0.26
HMGA1-204ENST00000401473 SLC7A9P82251 487 aa16.65■□□□□ 0.26
HMGA1-204ENST00000401473 SPA17Q15506 151 aa16.65■□□□□ 0.26
HMGA1-204ENST00000401473 CCDC14Q49A88 953 aa16.65■□□□□ 0.26
HMGA1-204ENST00000401473 RAB6CQ53S08 254 aa16.65■□□□□ 0.26
HMGA1-204ENST00000401473 TJAP1Q5JTD0 557 aa16.65■□□□□ 0.26
HMGA1-204ENST00000401473 C10orf76Q5T2E6 689 aa16.65■□□□□ 0.26
HMGA1-204ENST00000401473 SH3PXD2AQ5TCZ1 1133 aa16.65■□□□□ 0.26
HMGA1-204ENST00000401473 TANGO2Q6ICL3 276 aa16.65■□□□□ 0.26
HMGA1-204ENST00000401473 MSANTD2Q6P1R3 559 aa16.65■□□□□ 0.26
HMGA1-204ENST00000401473 PARM1Q6UWI2 310 aa16.65■□□□□ 0.26
HMGA1-204ENST00000401473 DQX1Q8TE96 717 aaKnown RBP16.65■□□□□ 0.26
HMGA1-204ENST00000401473 SMARCD2Q92925 531 aa16.65■□□□□ 0.26
HMGA1-204ENST00000401473 WBP2Q969T9 261 aa16.65■□□□□ 0.26
HMGA1-204ENST00000401473 TRIM11Q96F44 468 aa16.65■□□□□ 0.26
HMGA1-204ENST00000401473 KLF16Q9BXK1 252 aaPredicted RBP16.65■□□□□ 0.26
HMGA1-204ENST00000401473 RAB6CQ9H0N0 254 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms