RNA–Protein interactions for RNA: ENST00000399220.2

CX3CR1-202, Transcript of C-X3-C motif chemokine receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CR1, Length 3,106 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1-202ENST00000399220 TUBB8Q3ZCM7 444 aa7.12□□□□□ -1.27
CX3CR1-202ENST00000399220 RNASEH2BQ5TBB1 312 aaKnown RBP7.12□□□□□ -1.27
CX3CR1-202ENST00000399220 ZNF771Q7L3S4 317 aaPredicted RBP7.12□□□□□ -1.27
CX3CR1-202ENST00000399220 LRRTM3Q86VH5 581 aa7.12□□□□□ -1.27
CX3CR1-202ENST00000399220 ARHGAP18Q8N392 663 aa7.12□□□□□ -1.27
CX3CR1-202ENST00000399220 KCTD6Q8NC69 237 aa7.12□□□□□ -1.27
CX3CR1-202ENST00000399220 CLEC4CQ8WTT0 213 aa7.12□□□□□ -1.27
CX3CR1-202ENST00000399220 DPF3Q92784 378 aa7.12□□□□□ -1.27
CX3CR1-202ENST00000399220 RNF25Q96BH1 459 aaPredicted RBP7.12□□□□□ -1.27
CX3CR1-202ENST00000399220 DEFB118Q96PH6 123 aa7.12□□□□□ -1.27
CX3CR1-202ENST00000399220 TTLL2Q9BWV7 592 aa7.12□□□□□ -1.27
CX3CR1-202ENST00000399220 USP29Q9HBJ7 922 aa7.12□□□□□ -1.27
CX3CR1-202ENST00000399220 TMLHEQ9NVH6 421 aa7.12□□□□□ -1.27
CX3CR1-202ENST00000399220 DNPEPQ9ULA0 475 aa7.12□□□□□ -1.27
CX3CR1-202ENST00000399220 ZMYND8Q9ULU4 1186 aaPredicted RBP7.12□□□□□ -1.27
CX3CR1-202ENST00000399220 DENND4CQ5VZ89 1909 aa7.12□□□□□ -1.27
CX3CR1-202ENST00000399220 ESYT3A0FGR9 886 aa7.11□□□□□ -1.27
CX3CR1-202ENST00000399220 LRRD1A4D1F6 860 aa7.11□□□□□ -1.27
CX3CR1-202ENST00000399220 WASH4PA8MWX3 477 aa7.11□□□□□ -1.27
CX3CR1-202ENST00000399220 NRP1O14786 923 aa7.11□□□□□ -1.27
CX3CR1-202ENST00000399220 FAM155BO75949 473 aa7.11□□□□□ -1.27
CX3CR1-202ENST00000399220 ITGB1P05556 798 aa7.11□□□□□ -1.27
CX3CR1-202ENST00000399220 ZDHHC11BP0C7U3 371 aa7.11□□□□□ -1.27
CX3CR1-202ENST00000399220 BRCC3P46736 316 aa7.11□□□□□ -1.27
CX3CR1-202ENST00000399220 CACNA2D1P54289 1103 aa7.11□□□□□ -1.27
CX3CR1-202ENST00000399220 SKOR1P84550 965 aa7.11□□□□□ -1.27
CX3CR1-202ENST00000399220 TNK2Q07912 1038 aa7.11□□□□□ -1.27
CX3CR1-202ENST00000399220 GPR17Q13304 367 aa7.11□□□□□ -1.27
CX3CR1-202ENST00000399220 BRMS1LQ5PSV4 323 aa7.11□□□□□ -1.27
CX3CR1-202ENST00000399220 SH3PXD2AQ5TCZ1 1133 aa7.11□□□□□ -1.27
CX3CR1-202ENST00000399220 SLC8B1Q6J4K2 584 aa7.11□□□□□ -1.27
CX3CR1-202ENST00000399220 MFSD5Q6N075 450 aa7.11□□□□□ -1.27
CX3CR1-202ENST00000399220 BZW1Q7L1Q6 419 aaKnown RBP7.11□□□□□ -1.27
CX3CR1-202ENST00000399220 CCDC50Q8IVM0 306 aa7.11□□□□□ -1.27
CX3CR1-202ENST00000399220 GSPT2Q8IYD1 628 aaKnown RBP7.11□□□□□ -1.27
CX3CR1-202ENST00000399220 DEFB106AQ8N104 65 aa7.11□□□□□ -1.27
CX3CR1-202ENST00000399220 PCDH19Q8TAB3 1148 aa7.11□□□□□ -1.27
CX3CR1-202ENST00000399220 C1orf54Q8WWF1 131 aa7.11□□□□□ -1.27
CX3CR1-202ENST00000399220 ZIM3Q96PE6 472 aa7.11□□□□□ -1.27
CX3CR1-202ENST00000399220 SMOC2Q9H3U7 446 aa7.11□□□□□ -1.27
CX3CR1-202ENST00000399220 LRRC4Q9HBW1 653 aa7.11□□□□□ -1.27
CX3CR1-202ENST00000399220 TMBIM4Q9HC24 238 aa7.11□□□□□ -1.27
CX3CR1-202ENST00000399220 NEU3Q9UQ49 428 aa7.11□□□□□ -1.27
CX3CR1-202ENST00000399220 HTTP42858 3142 aa7.11□□□□□ -1.27
CX3CR1-202ENST00000399220 CLDN5O00501 218 aa7.11□□□□□ -1.27
CX3CR1-202ENST00000399220 CST8O60676 142 aa7.11□□□□□ -1.27
CX3CR1-202ENST00000399220 GCATO75600 419 aa7.11□□□□□ -1.27
CX3CR1-202ENST00000399220 KRT14P02533 472 aa7.11□□□□□ -1.27
CX3CR1-202ENST00000399220 LTFP02788 710 aa7.11□□□□□ -1.27
CX3CR1-202ENST00000399220 GALTP07902 379 aa7.11□□□□□ -1.27
CX3CR1-202ENST00000399220 CD48P09326 243 aa7.11□□□□□ -1.27
CX3CR1-202ENST00000399220 ACTN2P35609 894 aa7.11□□□□□ -1.27
CX3CR1-202ENST00000399220 GLUD2P49448 558 aa7.11□□□□□ -1.27
CX3CR1-202ENST00000399220 PSEN1P49768 467 aa7.11□□□□□ -1.27
CX3CR1-202ENST00000399220 HNRNPH2P55795 449 aaKnown RBP7.11□□□□□ -1.27
CX3CR1-202ENST00000399220 PPP2R5DQ14738 602 aa7.11□□□□□ -1.27
CX3CR1-202ENST00000399220 MANEALQ5VSG8 457 aa7.11□□□□□ -1.27
CX3CR1-202ENST00000399220 GPRIN1Q7Z2K8 1008 aa7.11□□□□□ -1.27
CX3CR1-202ENST00000399220 CMTR2Q8IYT2 770 aaKnown RBP7.11□□□□□ -1.27
CX3CR1-202ENST00000399220 SIX6OS1Q8N1H7 587 aa7.11□□□□□ -1.27
CX3CR1-202ENST00000399220 NAT8LQ8N9F0 302 aa7.11□□□□□ -1.27
CX3CR1-202ENST00000399220 FBXO25Q8TCJ0 367 aa7.11□□□□□ -1.27
CX3CR1-202ENST00000399220 SPPL2BQ8TCT7 592 aa7.11□□□□□ -1.27
CX3CR1-202ENST00000399220 PGM2Q96G03 612 aa7.11□□□□□ -1.27
CX3CR1-202ENST00000399220 C1orf74Q96LT6 269 aa7.11□□□□□ -1.27
CX3CR1-202ENST00000399220 QKIQ96PU8 341 aaKnown RBP eCLIP7.11□□□□□ -1.27
CX3CR1-202ENST00000399220 HAPLN3Q96S86 360 aa7.11□□□□□ -1.27
CX3CR1-202ENST00000399220 KCTD15Q96SI1 283 aaPredicted RBP7.11□□□□□ -1.27
CX3CR1-202ENST00000399220 HERC2P3Q9BVR0 1158 aa7.11□□□□□ -1.27
CX3CR1-202ENST00000399220 HIPK3Q9H422 1215 aa7.11□□□□□ -1.27
CX3CR1-202ENST00000399220 ABCC13Q9NSE7 274 aa7.11□□□□□ -1.27
CX3CR1-202ENST00000399220 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.11□□□□□ -1.27
CX3CR1-202ENST00000399220 CLIC5Q9NZA1 410 aa7.11□□□□□ -1.27
CX3CR1-202ENST00000399220 ADAM21Q9UKJ8 722 aa7.11□□□□□ -1.27
CX3CR1-202ENST00000399220 DOCK4Q8N1I0 1966 aa7.11□□□□□ -1.27
CX3CR1-202ENST00000399220 C5orf60A6NFR6 353 aa7.1□□□□□ -1.27
CX3CR1-202ENST00000399220 APOL1O14791 398 aa7.1□□□□□ -1.27
CX3CR1-202ENST00000399220 DCLK1O15075 740 aa7.1□□□□□ -1.27
CX3CR1-202ENST00000399220 IVLP07476 585 aa7.1□□□□□ -1.27
CX3CR1-202ENST00000399220 KRT10P13645 584 aa7.1□□□□□ -1.27
CX3CR1-202ENST00000399220 LCP1P13796 627 aa7.1□□□□□ -1.27
CX3CR1-202ENST00000399220 ATF2P15336 505 aa7.1□□□□□ -1.27
CX3CR1-202ENST00000399220 ACAT1P24752 427 aaKnown RBP7.1□□□□□ -1.27
CX3CR1-202ENST00000399220 PMS2P54278 862 aa7.1□□□□□ -1.27
CX3CR1-202ENST00000399220 MAP3K7CLP57077 242 aa7.1□□□□□ -1.27
CX3CR1-202ENST00000399220 OTUD4Q01804 1114 aaKnown RBP7.1□□□□□ -1.27
CX3CR1-202ENST00000399220 PRKD1Q15139 912 aaPredicted RBP7.1□□□□□ -1.27
CX3CR1-202ENST00000399220 ZC3H12AQ5D1E8 599 aaKnown RBP7.1□□□□□ -1.27
CX3CR1-202ENST00000399220 ANKS3Q6ZW76 656 aa7.1□□□□□ -1.27
CX3CR1-202ENST00000399220 DDX42Q86XP3 938 aaKnown RBP eCLIP7.1□□□□□ -1.27
CX3CR1-202ENST00000399220 IFT81Q8WYA0 676 aa7.1□□□□□ -1.27
CX3CR1-202ENST00000399220 ULBP1Q9BZM6 244 aa7.1□□□□□ -1.27
CX3CR1-202ENST00000399220 EURLQ9NYK6 297 aa7.1□□□□□ -1.27
CX3CR1-202ENST00000399220 TPX2Q9ULW0 747 aaKnown RBP7.1□□□□□ -1.27
CX3CR1-202ENST00000399220 AP4E1Q9UPM8 1137 aa7.1□□□□□ -1.27
CX3CR1-202ENST00000399220 HMGB1P1B2RPK0 211 aaPredicted RBP7.1□□□□□ -1.27
CX3CR1-202ENST00000399220 CHADO15335 359 aa7.1□□□□□ -1.27
CX3CR1-202ENST00000399220 NCAM2O15394 837 aa7.1□□□□□ -1.27
CX3CR1-202ENST00000399220 VNN2O95498 520 aa7.1□□□□□ -1.27
CX3CR1-202ENST00000399220 TIMP1P01033 207 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms