RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 CNOT3O75175 753 aaKnown RBP8.6□□□□□ -1.03
SPTLC3-201ENST00000399002 SERPIND1P05546 499 aa8.6□□□□□ -1.03
SPTLC3-201ENST00000399002 FAM58BPP0C7Q3 252 aa8.6□□□□□ -1.03
SPTLC3-201ENST00000399002 CD44P16070 742 aaKnown RBP8.6□□□□□ -1.03
SPTLC3-201ENST00000399002 NPTX2P47972 431 aa8.6□□□□□ -1.03
SPTLC3-201ENST00000399002 C1DQ13901 141 aaKnown RBP8.6□□□□□ -1.03
SPTLC3-201ENST00000399002 TRIM71Q2Q1W2 868 aaKnown RBP8.6□□□□□ -1.03
SPTLC3-201ENST00000399002 FAM98BQ52LJ0 330 aaKnown RBP8.6□□□□□ -1.03
SPTLC3-201ENST00000399002 COBLL1Q53SF7 1204 aa8.6□□□□□ -1.03
SPTLC3-201ENST00000399002 FAM45BPQ6NSW5 357 aa8.6□□□□□ -1.03
SPTLC3-201ENST00000399002 KYAT3Q6YP21 454 aaKnown RBP8.6□□□□□ -1.03
SPTLC3-201ENST00000399002 FUCA2Q9BTY2 467 aa8.6□□□□□ -1.03
SPTLC3-201ENST00000399002 THAP1Q9NVV9 213 aa8.6□□□□□ -1.03
SPTLC3-201ENST00000399002 DNAJC16Q9Y2G8 782 aa8.6□□□□□ -1.03
SPTLC3-201ENST00000399002 KLHL20Q9Y2M5 609 aa8.6□□□□□ -1.03
SPTLC3-201ENST00000399002 ALDH1A2O94788 518 aa8.6□□□□□ -1.03
SPTLC3-201ENST00000399002 IL1R1P14778 569 aa8.6□□□□□ -1.03
SPTLC3-201ENST00000399002 EPS8Q12929 822 aa8.6□□□□□ -1.03
SPTLC3-201ENST00000399002 DNAJC3Q13217 504 aa8.6□□□□□ -1.03
SPTLC3-201ENST00000399002 PCBP1Q15365 356 aaKnown RBP eCLIP8.6□□□□□ -1.03
SPTLC3-201ENST00000399002 CCDC142Q17RM4 750 aa8.6□□□□□ -1.03
SPTLC3-201ENST00000399002 KDELC2Q7Z4H8 507 aa8.6□□□□□ -1.03
SPTLC3-201ENST00000399002 ZNF786Q8N393 782 aa8.6□□□□□ -1.03
SPTLC3-201ENST00000399002 UGT2B28Q9BY64 529 aa8.6□□□□□ -1.03
SPTLC3-201ENST00000399002 CLPBQ9H078 707 aa8.6□□□□□ -1.03
SPTLC3-201ENST00000399002 ACOT9Q9Y305 439 aa8.6□□□□□ -1.03
SPTLC3-201ENST00000399002 SLIT3O75094 1523 aa8.6□□□□□ -1.03
SPTLC3-201ENST00000399002 FOXN3O00409 490 aaPredicted RBP8.6□□□□□ -1.03
SPTLC3-201ENST00000399002 GRK3P35626 688 aa8.6□□□□□ -1.03
SPTLC3-201ENST00000399002 CAMK2GQ13555 558 aaPredicted RBP8.6□□□□□ -1.03
SPTLC3-201ENST00000399002 OLFML2BQ68BL8 750 aa8.6□□□□□ -1.03
SPTLC3-201ENST00000399002 GJB7Q6PEY0 223 aa8.6□□□□□ -1.03
SPTLC3-201ENST00000399002 STRA8Q7Z7C7 330 aa8.6□□□□□ -1.03
SPTLC3-201ENST00000399002 KIF2BQ8N4N8 673 aa8.6□□□□□ -1.03
SPTLC3-201ENST00000399002 KYQ8NBH2 561 aa8.6□□□□□ -1.03
SPTLC3-201ENST00000399002 TMEM106CQ9BVX2 250 aa8.6□□□□□ -1.03
SPTLC3-201ENST00000399002 POLD4Q9HCU8 107 aa8.6□□□□□ -1.03
SPTLC3-201ENST00000399002 KLHL3Q9UH77 587 aa8.6□□□□□ -1.03
SPTLC3-201ENST00000399002 VANGL2Q9ULK5 521 aa8.6□□□□□ -1.03
SPTLC3-201ENST00000399002 BARX2Q9UMQ3 279 aaPredicted RBP8.6□□□□□ -1.03
SPTLC3-201ENST00000399002 L1RE1Q9UN81 338 aa8.6□□□□□ -1.03
SPTLC3-201ENST00000399002 TMX2Q9Y320 296 aa8.6□□□□□ -1.03
SPTLC3-201ENST00000399002 TGFB3P10600 412 aa8.6□□□□□ -1.03
SPTLC3-201ENST00000399002 OR1G1P47890 313 aa8.6□□□□□ -1.03
SPTLC3-201ENST00000399002 SLC1A6P48664 564 aa8.6□□□□□ -1.03
SPTLC3-201ENST00000399002 SARSP49591 514 aaKnown RBP8.6□□□□□ -1.03
SPTLC3-201ENST00000399002 CDH17Q12864 832 aa8.6□□□□□ -1.03
SPTLC3-201ENST00000399002 MMRN1Q13201 1228 aa8.6□□□□□ -1.03
SPTLC3-201ENST00000399002 BFSP2Q13515 415 aa8.6□□□□□ -1.03
SPTLC3-201ENST00000399002 SEC23AQ15436 765 aa8.6□□□□□ -1.03
SPTLC3-201ENST00000399002 MCOLN2Q8IZK6 566 aa8.6□□□□□ -1.03
SPTLC3-201ENST00000399002 KRT78Q8N1N4 520 aa8.6□□□□□ -1.03
SPTLC3-201ENST00000399002 FBXO44Q9H4M3 255 aa8.6□□□□□ -1.03
SPTLC3-201ENST00000399002 COPS7BQ9H9Q2 264 aaPredicted RBP8.6□□□□□ -1.03
SPTLC3-201ENST00000399002 KCNQ5Q9NR82 932 aa8.6□□□□□ -1.03
SPTLC3-201ENST00000399002 TLR8Q9NR97 1041 aaKnown RBP8.6□□□□□ -1.03
SPTLC3-201ENST00000399002 DDIT4Q9NX09 232 aa8.6□□□□□ -1.03
SPTLC3-201ENST00000399002 COPG2Q9UBF2 871 aa8.6□□□□□ -1.03
SPTLC3-201ENST00000399002 COL3A1P02461 1466 aaPredicted RBP8.6□□□□□ -1.03
SPTLC3-201ENST00000399002 FRMPD4Q14CM0 1322 aa8.6□□□□□ -1.03
SPTLC3-201ENST00000399002 ATXN2Q99700 1313 aaKnown RBP8.6□□□□□ -1.03
SPTLC3-201ENST00000399002 CYB561D2O14569 222 aa8.6□□□□□ -1.03
SPTLC3-201ENST00000399002 FGFR2P21802 821 aa8.6□□□□□ -1.03
SPTLC3-201ENST00000399002 KCNMA1Q12791 1236 aa8.6□□□□□ -1.03
SPTLC3-201ENST00000399002 C16orf72Q14CZ0 275 aa8.6□□□□□ -1.03
SPTLC3-201ENST00000399002 ZNF284Q2VY69 593 aa8.6□□□□□ -1.03
SPTLC3-201ENST00000399002 ATP6AP1LQ52LC2 224 aa8.6□□□□□ -1.03
SPTLC3-201ENST00000399002 TRAF7Q6Q0C0 670 aa8.6□□□□□ -1.03
SPTLC3-201ENST00000399002 TMEM26Q6ZUK4 368 aa8.6□□□□□ -1.03
SPTLC3-201ENST00000399002 MICU2Q8IYU8 434 aa8.6□□□□□ -1.03
SPTLC3-201ENST00000399002 SLC5A5Q92911 643 aa8.6□□□□□ -1.03
SPTLC3-201ENST00000399002 DOLKQ9UPQ8 538 aa8.6□□□□□ -1.03
SPTLC3-201ENST00000399002 XPO1O14980 1071 aaKnown RBP8.59□□□□□ -1.03
SPTLC3-201ENST00000399002 RNASEH1O60930 286 aaKnown RBP8.59□□□□□ -1.03
SPTLC3-201ENST00000399002 NPM3O75607 178 aaKnown RBP8.59□□□□□ -1.03
SPTLC3-201ENST00000399002 RTN3O95197 1032 aaPredicted RBP8.59□□□□□ -1.03
SPTLC3-201ENST00000399002 HMBSP08397 361 aa8.59□□□□□ -1.03
SPTLC3-201ENST00000399002 CYP2F1P24903 491 aa8.59□□□□□ -1.03
SPTLC3-201ENST00000399002 SERPINB5P36952 375 aa8.59□□□□□ -1.03
SPTLC3-201ENST00000399002 TBX2Q13207 712 aaPredicted RBP8.59□□□□□ -1.03
SPTLC3-201ENST00000399002 PLEKHH3Q7Z736 793 aa8.59□□□□□ -1.03
SPTLC3-201ENST00000399002 CROCCP3Q8IVE0 287 aa8.59□□□□□ -1.03
SPTLC3-201ENST00000399002 AENQ8WTP8 325 aaKnown RBP8.59□□□□□ -1.03
SPTLC3-201ENST00000399002 PGM2Q96G03 612 aa8.59□□□□□ -1.03
SPTLC3-201ENST00000399002 APOL4Q9BPW4 351 aa8.59□□□□□ -1.03
SPTLC3-201ENST00000399002 BDH2Q9BUT1 245 aa8.59□□□□□ -1.03
SPTLC3-201ENST00000399002 THUMPD3Q9BV44 507 aaKnown RBP8.59□□□□□ -1.03
SPTLC3-201ENST00000399002 FICDQ9BVA6 458 aa8.59□□□□□ -1.03
SPTLC3-201ENST00000399002 TARS2Q9BW92 718 aaKnown RBP8.59□□□□□ -1.03
SPTLC3-201ENST00000399002 SLC39A8Q9C0K1 460 aa8.59□□□□□ -1.03
SPTLC3-201ENST00000399002 A0A087X0T9 212 aa8.59□□□□□ -1.03
SPTLC3-201ENST00000399002 UBDO15205 165 aa8.59□□□□□ -1.03
SPTLC3-201ENST00000399002 ABHD2P08910 425 aa8.59□□□□□ -1.03
SPTLC3-201ENST00000399002 FAM228BP0C875 321 aa8.59□□□□□ -1.03
SPTLC3-201ENST00000399002 ZNF23P17027 643 aa8.59□□□□□ -1.03
SPTLC3-201ENST00000399002 FASP25445 335 aa8.59□□□□□ -1.03
SPTLC3-201ENST00000399002 AQP5P55064 265 aa8.59□□□□□ -1.03
SPTLC3-201ENST00000399002 RPS6P62753 249 aaKnown RBP8.59□□□□□ -1.03
SPTLC3-201ENST00000399002 SLC34A1Q06495 639 aa8.59□□□□□ -1.03
SPTLC3-201ENST00000399002 FOXD4Q12950 439 aaPredicted RBP8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms