RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 PIKFYVEQ9Y2I7 2098 aa6.08□□□□□ -1.44
PTPRD-206ENST00000397617 MEFVO15553 781 aaPredicted RBP6.08□□□□□ -1.44
PTPRD-206ENST00000397617 NCK2O43639 380 aa6.08□□□□□ -1.44
PTPRD-206ENST00000397617 FSBPO95073 299 aa6.08□□□□□ -1.44
PTPRD-206ENST00000397617 LTFP02788 710 aa6.08□□□□□ -1.44
PTPRD-206ENST00000397617 POU2F2P09086 479 aa6.08□□□□□ -1.44
PTPRD-206ENST00000397617 CXCR5P32302 372 aa6.08□□□□□ -1.44
PTPRD-206ENST00000397617 TKTL1P51854 596 aa6.08□□□□□ -1.44
PTPRD-206ENST00000397617 HNRNPDQ14103 355 aaKnown RBP6.08□□□□□ -1.44
PTPRD-206ENST00000397617 SPARCL1Q14515 664 aa6.08□□□□□ -1.44
PTPRD-206ENST00000397617 SLC29A2Q14542 456 aa6.08□□□□□ -1.44
PTPRD-206ENST00000397617 PTGISQ16647 500 aa6.08□□□□□ -1.44
PTPRD-206ENST00000397617 ADGRD1Q6QNK2 874 aa6.08□□□□□ -1.44
PTPRD-206ENST00000397617 LRRC71Q8N4P6 559 aa6.08□□□□□ -1.44
PTPRD-206ENST00000397617 FBF1Q8TES7 1133 aa6.08□□□□□ -1.44
PTPRD-206ENST00000397617 RSAD2Q8WXG1 361 aa6.08□□□□□ -1.44
PTPRD-206ENST00000397617 MMADHCQ9H3L0 296 aaPredicted RBP6.08□□□□□ -1.44
PTPRD-206ENST00000397617 INTS9Q9NV88 658 aaKnown RBP6.08□□□□□ -1.44
PTPRD-206ENST00000397617 PIN4Q9Y237 131 aaKnown RBP6.08□□□□□ -1.44
PTPRD-206ENST00000397617 A0A1W2PQ67 120 aa6.08□□□□□ -1.44
PTPRD-206ENST00000397617 C3orf70A6NLC5 250 aaPredicted RBP6.08□□□□□ -1.44
PTPRD-206ENST00000397617 M0QYV0 167 aa6.08□□□□□ -1.44
PTPRD-206ENST00000397617 ZBED1O96006 694 aa6.08□□□□□ -1.44
PTPRD-206ENST00000397617 PENKP01210 267 aaPredicted RBP6.08□□□□□ -1.44
PTPRD-206ENST00000397617 CXCL10P02778 98 aa6.08□□□□□ -1.44
PTPRD-206ENST00000397617 ALADP13716 330 aa6.08□□□□□ -1.44
PTPRD-206ENST00000397617 MAGEA4P43358 317 aa6.08□□□□□ -1.44
PTPRD-206ENST00000397617 DAOAP59103 153 aa6.08□□□□□ -1.44
PTPRD-206ENST00000397617 TIGD7Q6NT04 549 aaPredicted RBP6.08□□□□□ -1.44
PTPRD-206ENST00000397617 TTC27Q6P3X3 843 aa6.08□□□□□ -1.44
PTPRD-206ENST00000397617 NAT8LQ8N9F0 302 aa6.08□□□□□ -1.44
PTPRD-206ENST00000397617 MCEEQ96PE7 176 aa6.08□□□□□ -1.44
PTPRD-206ENST00000397617 ZNF317Q96PQ6 595 aaPredicted RBP6.08□□□□□ -1.44
PTPRD-206ENST00000397617 XPO6Q96QU8 1125 aaKnown RBP6.08□□□□□ -1.44
PTPRD-206ENST00000397617 AP1M1Q9BXS5 423 aa6.08□□□□□ -1.44
PTPRD-206ENST00000397617 NRDE2Q9H7Z3 1164 aa6.08□□□□□ -1.44
PTPRD-206ENST00000397617 PCDH18Q9HCL0 1135 aa6.08□□□□□ -1.44
PTPRD-206ENST00000397617 SAMD15Q9P1V8 674 aa6.08□□□□□ -1.44
PTPRD-206ENST00000397617 SNX24Q9Y343 169 aa6.08□□□□□ -1.44
PTPRD-206ENST00000397617 TSC2P49815 1807 aa6.08□□□□□ -1.44
PTPRD-206ENST00000397617 APOL1O14791 398 aa6.08□□□□□ -1.44
PTPRD-206ENST00000397617 TIMM44O43615 452 aa6.08□□□□□ -1.44
PTPRD-206ENST00000397617 ALDH1A2O94788 518 aa6.08□□□□□ -1.44
PTPRD-206ENST00000397617 SRGAP2BP0DMP2 458 aa6.08□□□□□ -1.44
PTPRD-206ENST00000397617 PTPN1P18031 435 aaKnown RBP6.08□□□□□ -1.44
PTPRD-206ENST00000397617 PSMA3P25788 255 aa6.08□□□□□ -1.44
PTPRD-206ENST00000397617 RPL22P35268 128 aaKnown RBP6.08□□□□□ -1.44
PTPRD-206ENST00000397617 ANO4Q32M45 955 aa6.08□□□□□ -1.44
PTPRD-206ENST00000397617 DARS2Q6PI48 645 aaKnown RBP6.08□□□□□ -1.44
PTPRD-206ENST00000397617 PIGZQ86VD9 579 aa6.08□□□□□ -1.44
PTPRD-206ENST00000397617 ADGRF2Q8IZF7 708 aa6.08□□□□□ -1.44
PTPRD-206ENST00000397617 CACNA2D3Q8IZS8 1091 aa6.08□□□□□ -1.44
PTPRD-206ENST00000397617 KHSRPQ92945 711 aaKnown RBP eCLIP6.08□□□□□ -1.44
PTPRD-206ENST00000397617 RHOBTB2Q9BYZ6 727 aa6.08□□□□□ -1.44
PTPRD-206ENST00000397617 PPP1R12CQ9BZL4 782 aa6.08□□□□□ -1.44
PTPRD-206ENST00000397617 XPNPEP3Q9NQH7 507 aa6.08□□□□□ -1.44
PTPRD-206ENST00000397617 PPARGC1AQ9UBK2 798 aaKnown RBP6.08□□□□□ -1.44
PTPRD-206ENST00000397617 ADCY6O43306 1168 aa6.08□□□□□ -1.44
PTPRD-206ENST00000397617 ANXA9O76027 345 aa6.08□□□□□ -1.44
PTPRD-206ENST00000397617 TUFMP49411 452 aaKnown RBP6.08□□□□□ -1.44
PTPRD-206ENST00000397617 CDH6P55285 790 aa6.08□□□□□ -1.44
PTPRD-206ENST00000397617 PDE4CQ08493 712 aa6.08□□□□□ -1.44
PTPRD-206ENST00000397617 GALNT2Q10471 571 aa6.08□□□□□ -1.44
PTPRD-206ENST00000397617 PDK4Q16654 411 aa6.08□□□□□ -1.44
PTPRD-206ENST00000397617 LACTB2Q53H82 288 aaPredicted RBP6.08□□□□□ -1.44
PTPRD-206ENST00000397617 NAPEPLDQ6IQ20 393 aa6.08□□□□□ -1.44
PTPRD-206ENST00000397617 DPF3Q92784 378 aa6.08□□□□□ -1.44
PTPRD-206ENST00000397617 SENP8Q96LD8 212 aa6.08□□□□□ -1.44
PTPRD-206ENST00000397617 IFI35P80217 286 aaPredicted RBP6.08□□□□□ -1.44
PTPRD-206ENST00000397617 PPIDQ08752 370 aaKnown RBP6.08□□□□□ -1.44
PTPRD-206ENST00000397617 ZNF252P-AS1Q0IIN9 211 aa6.08□□□□□ -1.44
PTPRD-206ENST00000397617 TRIM71Q2Q1W2 868 aaKnown RBP6.08□□□□□ -1.44
PTPRD-206ENST00000397617 MPP7Q5T2T1 576 aa6.08□□□□□ -1.44
PTPRD-206ENST00000397617 LEMD2Q8NC56 503 aa6.08□□□□□ -1.44
PTPRD-206ENST00000397617 HEXIM2Q96MH2 286 aaKnown RBP6.08□□□□□ -1.44
PTPRD-206ENST00000397617 H7C4K7 107 aa6.08□□□□□ -1.44
PTPRD-206ENST00000397617 PTGESO14684 152 aa6.08□□□□□ -1.44
PTPRD-206ENST00000397617 ROR1Q01973 937 aa6.08□□□□□ -1.44
PTPRD-206ENST00000397617 PARP6Q2NL67 630 aa6.08□□□□□ -1.44
PTPRD-206ENST00000397617 PRAMEF18Q5VWM3 479 aa6.08□□□□□ -1.44
PTPRD-206ENST00000397617 CST9Q5W186 159 aa6.08□□□□□ -1.44
PTPRD-206ENST00000397617 TPGS2Q68CL5 300 aa6.08□□□□□ -1.44
PTPRD-206ENST00000397617 USP33Q8TEY7 942 aa6.08□□□□□ -1.44
PTPRD-206ENST00000397617 POP1Q99575 1024 aaKnown RBP6.08□□□□□ -1.44
PTPRD-206ENST00000397617 TTLL2Q9BWV7 592 aa6.08□□□□□ -1.44
PTPRD-206ENST00000397617 KDM4CQ9H3R0 1056 aa6.08□□□□□ -1.44
PTPRD-206ENST00000397617 RGS18Q9NS28 235 aa6.08□□□□□ -1.44
PTPRD-206ENST00000397617 TBC1D13Q9NVG8 400 aa6.08□□□□□ -1.44
PTPRD-206ENST00000397617 ARIH1Q9Y4X5 557 aaPredicted RBP6.08□□□□□ -1.44
PTPRD-206ENST00000397617 CCT5P48643 541 aa6.08□□□□□ -1.44
PTPRD-206ENST00000397617 LMAN1P49257 510 aa6.08□□□□□ -1.44
PTPRD-206ENST00000397617 EIF4EBP2Q13542 120 aaPredicted RBP6.08□□□□□ -1.44
PTPRD-206ENST00000397617 URGCPQ8TCY9 931 aa6.08□□□□□ -1.44
PTPRD-206ENST00000397617 CALML6Q8TD86 181 aa6.08□□□□□ -1.44
PTPRD-206ENST00000397617 SPATA17Q96L03 361 aa6.08□□□□□ -1.44
PTPRD-206ENST00000397617 CCT8L2Q96SF2 557 aa6.08□□□□□ -1.44
PTPRD-206ENST00000397617 IL22Q9GZX6 179 aa6.08□□□□□ -1.44
PTPRD-206ENST00000397617 ABCC13Q9NSE7 274 aa6.08□□□□□ -1.44
PTPRD-206ENST00000397617 SETD4Q9NVD3 440 aa6.08□□□□□ -1.44
PTPRD-206ENST00000397617 IPPQ9Y573 584 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms