RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 ALDH1A3P47895 512 aa15.58■□□□□ 0.09
CAPN3-207ENST00000397200 GPR15P49685 360 aa15.58■□□□□ 0.09
CAPN3-207ENST00000397200 PTPN20Q4JDL3 420 aa15.58■□□□□ 0.09
CAPN3-207ENST00000397200 TTC27Q6P3X3 843 aa15.58■□□□□ 0.09
CAPN3-207ENST00000397200 CCDC149Q6ZUS6 474 aa15.58■□□□□ 0.09
CAPN3-207ENST00000397200 JAMLQ86YT9 394 aa15.58■□□□□ 0.09
CAPN3-207ENST00000397200 KREMEN2Q8NCW0 462 aa15.58■□□□□ 0.09
CAPN3-207ENST00000397200 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.58■□□□□ 0.09
CAPN3-207ENST00000397200 FEZF2Q8TBJ5 459 aa15.58■□□□□ 0.09
CAPN3-207ENST00000397200 KCTD13Q8WZ19 329 aa15.58■□□□□ 0.09
CAPN3-207ENST00000397200 LRCH3Q96II8 777 aa15.58■□□□□ 0.09
CAPN3-207ENST00000397200 ZIM3Q96PE6 472 aa15.58■□□□□ 0.09
CAPN3-207ENST00000397200 SLC4A5Q9BY07 1137 aa15.58■□□□□ 0.09
CAPN3-207ENST00000397200 MIS12Q9H081 205 aa15.58■□□□□ 0.09
CAPN3-207ENST00000397200 LRRC19Q9H756 370 aa15.58■□□□□ 0.09
CAPN3-207ENST00000397200 LRRC4Q9HBW1 653 aa15.58■□□□□ 0.09
CAPN3-207ENST00000397200 YIPF1Q9Y548 306 aa15.58■□□□□ 0.09
CAPN3-207ENST00000397200 HHLA1C9JL84 531 aa15.57■□□□□ 0.08
CAPN3-207ENST00000397200 GOLGA8KD6RF30 607 aa15.57■□□□□ 0.08
CAPN3-207ENST00000397200 E5RJQ4 531 aa15.57■□□□□ 0.08
CAPN3-207ENST00000397200 PIK3R2O00459 728 aa15.57■□□□□ 0.08
CAPN3-207ENST00000397200 OPA1O60313 960 aa15.57■□□□□ 0.08
CAPN3-207ENST00000397200 GBP1P32455 592 aa15.57■□□□□ 0.08
CAPN3-207ENST00000397200 NRIP1P48552 1158 aa15.57■□□□□ 0.08
CAPN3-207ENST00000397200 GRIN2CQ14957 1233 aa15.57■□□□□ 0.08
CAPN3-207ENST00000397200 C2CD6Q53TS8 623 aa15.57■□□□□ 0.08
CAPN3-207ENST00000397200 SPDYCQ5MJ68 293 aa15.57■□□□□ 0.08
CAPN3-207ENST00000397200 SDHAF4Q5VUM1 108 aa15.57■□□□□ 0.08
CAPN3-207ENST00000397200 DDX42Q86XP3 938 aaKnown RBP eCLIP15.57■□□□□ 0.08
CAPN3-207ENST00000397200 KATNAL2Q8IYT4 538 aa15.57■□□□□ 0.08
CAPN3-207ENST00000397200 SLC7A14Q8TBB6 771 aa15.57■□□□□ 0.08
CAPN3-207ENST00000397200 LRRC45Q96CN5 670 aa15.57■□□□□ 0.08
CAPN3-207ENST00000397200 C18orf8Q96DM3 657 aa15.57■□□□□ 0.08
CAPN3-207ENST00000397200 SPATA17Q96L03 361 aa15.57■□□□□ 0.08
CAPN3-207ENST00000397200 CDCA3Q99618 268 aaPredicted RBP15.57■□□□□ 0.08
CAPN3-207ENST00000397200 TRIM51Q9BSJ1 452 aa15.57■□□□□ 0.08
CAPN3-207ENST00000397200 TXLNGYQ9BZA5 131 aa15.57■□□□□ 0.08
CAPN3-207ENST00000397200 NSUN3Q9H649 340 aaKnown RBP15.57■□□□□ 0.08
CAPN3-207ENST00000397200 ZDHHC18Q9NUE0 388 aa15.57■□□□□ 0.08
CAPN3-207ENST00000397200 DPP7Q9UHL4 492 aa15.57■□□□□ 0.08
CAPN3-207ENST00000397200 RASAL2Q9UJF2 1139 aa15.57■□□□□ 0.08
CAPN3-207ENST00000397200 STRIP2Q9ULQ0 834 aa15.57■□□□□ 0.08
CAPN3-207ENST00000397200 INSL5Q9Y5Q6 135 aa15.57■□□□□ 0.08
CAPN3-207ENST00000397200 TCRBV7S2A1N4TA0A589 114 aa15.57■□□□□ 0.08
CAPN3-207ENST00000397200 TMEM191CA6NGB0 347 aa15.57■□□□□ 0.08
CAPN3-207ENST00000397200 ERBB2P04626 1255 aa15.57■□□□□ 0.08
CAPN3-207ENST00000397200 C8AP07357 584 aa15.57■□□□□ 0.08
CAPN3-207ENST00000397200 RARAP10276 462 aa15.57■□□□□ 0.08
CAPN3-207ENST00000397200 LCP1P13796 627 aa15.57■□□□□ 0.08
CAPN3-207ENST00000397200 ATF6P18850 670 aa15.57■□□□□ 0.08
CAPN3-207ENST00000397200 RPL34P49207 117 aaKnown RBP15.57■□□□□ 0.08
CAPN3-207ENST00000397200 TKTL1P51854 596 aa15.57■□□□□ 0.08
CAPN3-207ENST00000397200 ADIGQ0VDE8 80 aa15.57■□□□□ 0.08
CAPN3-207ENST00000397200 PLD1Q13393 1074 aa15.57■□□□□ 0.08
CAPN3-207ENST00000397200 HLTFQ14527 1009 aaKnown RBP eCLIP15.57■□□□□ 0.08
CAPN3-207ENST00000397200 DUSP6Q16828 381 aa15.57■□□□□ 0.08
CAPN3-207ENST00000397200 RAB41Q5JT25 222 aa15.57■□□□□ 0.08
CAPN3-207ENST00000397200 ELMSAN1Q6PJG2 1045 aa15.57■□□□□ 0.08
CAPN3-207ENST00000397200 LRIG3Q6UXM1 1119 aa15.57■□□□□ 0.08
CAPN3-207ENST00000397200 ADAT2Q7Z6V5 191 aaKnown RBP15.57■□□□□ 0.08
CAPN3-207ENST00000397200 TMEM110Q86TL2 294 aa15.57■□□□□ 0.08
CAPN3-207ENST00000397200 RHOT1Q8IXI2 618 aa15.57■□□□□ 0.08
CAPN3-207ENST00000397200 SIX6OS1Q8N1H7 587 aa15.57■□□□□ 0.08
CAPN3-207ENST00000397200 NIPA2Q8N8Q9 360 aa15.57■□□□□ 0.08
CAPN3-207ENST00000397200 SLC22A17Q8WUG5 538 aa15.57■□□□□ 0.08
CAPN3-207ENST00000397200 MAIP1Q8WWC4 291 aa15.57■□□□□ 0.08
CAPN3-207ENST00000397200 CEP295NLQ96MC4 621 aa15.57■□□□□ 0.08
CAPN3-207ENST00000397200 MAN1C1Q9NR34 630 aa15.57■□□□□ 0.08
CAPN3-207ENST00000397200 LMCD1Q9NZU5 365 aa15.57■□□□□ 0.08
CAPN3-207ENST00000397200 IP6K2Q9UHH9 426 aa15.57■□□□□ 0.08
CAPN3-207ENST00000397200 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.57■□□□□ 0.08
CAPN3-207ENST00000397200 GREB1Q4ZG55 1949 aa15.56■□□□□ 0.08
CAPN3-207ENST00000397200 EPCAMP16422 314 aa15.56■□□□□ 0.08
CAPN3-207ENST00000397200 COILP38432 576 aaPredicted RBP15.56■□□□□ 0.08
CAPN3-207ENST00000397200 GABRB2P47870 512 aa15.56■□□□□ 0.08
CAPN3-207ENST00000397200 SLC5A3P53794 718 aa15.56■□□□□ 0.08
CAPN3-207ENST00000397200 GYS2P54840 703 aa15.56■□□□□ 0.08
CAPN3-207ENST00000397200 ZNF252P-AS1Q0IIN9 211 aa15.56■□□□□ 0.08
CAPN3-207ENST00000397200 TWF1Q12792 350 aa15.56■□□□□ 0.08
CAPN3-207ENST00000397200 VEPH1Q14D04 833 aa15.56■□□□□ 0.08
CAPN3-207ENST00000397200 UAP1Q16222 522 aaPredicted RBP15.56■□□□□ 0.08
CAPN3-207ENST00000397200 CFAP58Q5T655 872 aa15.56■□□□□ 0.08
CAPN3-207ENST00000397200 CYP4A22Q5TCH4 519 aa15.56■□□□□ 0.08
CAPN3-207ENST00000397200 CCDC137Q6PK04 289 aaKnown RBP15.56■□□□□ 0.08
CAPN3-207ENST00000397200 DENND5BQ6ZUT9 1274 aa15.56■□□□□ 0.08
CAPN3-207ENST00000397200 GPRIN1Q7Z2K8 1008 aa15.56■□□□□ 0.08
CAPN3-207ENST00000397200 NUP93Q8N1F7 819 aa15.56■□□□□ 0.08
CAPN3-207ENST00000397200 C3orf20Q8ND61 904 aa15.56■□□□□ 0.08
CAPN3-207ENST00000397200 GPR152Q8TDT2 470 aa15.56■□□□□ 0.08
CAPN3-207ENST00000397200 GIPC2Q8TF65 315 aa15.56■□□□□ 0.08
CAPN3-207ENST00000397200 MAGOHBQ96A72 148 aaKnown RBP15.56■□□□□ 0.08
CAPN3-207ENST00000397200 FAM129AQ9BZQ8 928 aa15.56■□□□□ 0.08
CAPN3-207ENST00000397200 FAM204AQ9H8W3 233 aa15.56■□□□□ 0.08
CAPN3-207ENST00000397200 TJP2Q9UDY2 1190 aa15.56■□□□□ 0.08
CAPN3-207ENST00000397200 HCFC2Q9Y5Z7 792 aa15.56■□□□□ 0.08
CAPN3-207ENST00000397200 MYO16Q9Y6X6 1858 aa15.56■□□□□ 0.08
CAPN3-207ENST00000397200 TNFRSF10BO14763 440 aa15.55■□□□□ 0.08
CAPN3-207ENST00000397200 GABBR2O75899 941 aa15.55■□□□□ 0.08
CAPN3-207ENST00000397200 FBXO21O94952 628 aa15.55■□□□□ 0.08
CAPN3-207ENST00000397200 RTN3O95197 1032 aaPredicted RBP15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 148.3 ms