RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 FBXO32Q969P5 355 aa12.67□□□□□ -0.38
SMU1-201ENST00000397149 CELF4Q9BZC1 486 aaKnown RBP12.67□□□□□ -0.38
SMU1-201ENST00000397149 CD248Q9HCU0 757 aa12.67□□□□□ -0.38
SMU1-201ENST00000397149 PIH1D3Q9NQM4 214 aaKnown RBP12.67□□□□□ -0.38
SMU1-201ENST00000397149 PCDHA10Q9Y5I2 948 aa12.67□□□□□ -0.38
SMU1-201ENST00000397149 RPS6KL1Q9Y6S9 549 aa12.67□□□□□ -0.38
SMU1-201ENST00000397149 CYP2F1P24903 491 aa12.67□□□□□ -0.38
SMU1-201ENST00000397149 SLC1A1P43005 524 aa12.67□□□□□ -0.38
SMU1-201ENST00000397149 PIGHQ14442 188 aaPredicted RBP12.67□□□□□ -0.38
SMU1-201ENST00000397149 TSHZ1Q6ZSZ6 1077 aa12.67□□□□□ -0.38
SMU1-201ENST00000397149 MRPS31Q92665 395 aaKnown RBP12.67□□□□□ -0.38
SMU1-201ENST00000397149 CALR3Q96L12 384 aaKnown RBP12.67□□□□□ -0.38
SMU1-201ENST00000397149 MXD3Q9BW11 206 aa12.67□□□□□ -0.38
SMU1-201ENST00000397149 TMEM120AQ9BXJ8 343 aa12.67□□□□□ -0.38
SMU1-201ENST00000397149 DPY30Q9C005 99 aa12.67□□□□□ -0.38
SMU1-201ENST00000397149 EPB41L4BQ9H329 900 aa12.67□□□□□ -0.38
SMU1-201ENST00000397149 HEY2Q9UBP5 337 aa12.67□□□□□ -0.38
SMU1-201ENST00000397149 CLEC4AQ9UMR7 237 aa12.67□□□□□ -0.38
SMU1-201ENST00000397149 TNFSF13BQ9Y275 285 aa12.67□□□□□ -0.38
SMU1-201ENST00000397149 TTC26A0AVF1 554 aa12.67□□□□□ -0.38
SMU1-201ENST00000397149 PLOD3O60568 738 aa12.67□□□□□ -0.38
SMU1-201ENST00000397149 RPL4P36578 427 aaKnown RBP12.67□□□□□ -0.38
SMU1-201ENST00000397149 KYAT1Q16773 422 aa12.67□□□□□ -0.38
SMU1-201ENST00000397149 PARGQ86W56 976 aa12.67□□□□□ -0.38
SMU1-201ENST00000397149 CCDC54Q8NEL0 328 aa12.67□□□□□ -0.38
SMU1-201ENST00000397149 OSBPL8Q9BZF1 889 aa12.67□□□□□ -0.38
SMU1-201ENST00000397149 COMMD8Q9NX08 183 aa12.67□□□□□ -0.38
SMU1-201ENST00000397149 POLR3AO14802 1390 aaPredicted RBP12.67□□□□□ -0.38
SMU1-201ENST00000397149 VPS4BO75351 444 aa12.67□□□□□ -0.38
SMU1-201ENST00000397149 BMP10O95393 424 aa12.67□□□□□ -0.38
SMU1-201ENST00000397149 GTF2H1P32780 548 aa12.67□□□□□ -0.38
SMU1-201ENST00000397149 IL13P35225 146 aa12.67□□□□□ -0.38
SMU1-201ENST00000397149 EXOSC10Q01780 885 aaKnown RBP12.67□□□□□ -0.38
SMU1-201ENST00000397149 AGKQ53H12 422 aa12.67□□□□□ -0.38
SMU1-201ENST00000397149 RESP18Q5W5W9 173 aa12.67□□□□□ -0.38
SMU1-201ENST00000397149 ARMCX6Q7L4S7 300 aa12.67□□□□□ -0.38
SMU1-201ENST00000397149 FAM220AQ7Z4H9 259 aa12.67□□□□□ -0.38
SMU1-201ENST00000397149 DSELQ8IZU8 1212 aa12.67□□□□□ -0.38
SMU1-201ENST00000397149 REXO5Q96IC2 774 aaKnown RBP12.67□□□□□ -0.38
SMU1-201ENST00000397149 CATSPER2Q96P56 530 aa12.67□□□□□ -0.38
SMU1-201ENST00000397149 MNTQ99583 582 aa12.67□□□□□ -0.38
SMU1-201ENST00000397149 AAASQ9NRG9 546 aa12.67□□□□□ -0.38
SMU1-201ENST00000397149 PDS5AQ29RF7 1337 aaKnown RBP12.67□□□□□ -0.38
SMU1-201ENST00000397149 NCK1P16333 377 aa12.67□□□□□ -0.38
SMU1-201ENST00000397149 CCND1P24385 295 aa12.67□□□□□ -0.38
SMU1-201ENST00000397149 SMCO1Q147U7 214 aa12.67□□□□□ -0.38
SMU1-201ENST00000397149 KCNT1Q5JUK3 1230 aa12.67□□□□□ -0.38
SMU1-201ENST00000397149 GPAT2Q6NUI2 795 aa12.67□□□□□ -0.38
SMU1-201ENST00000397149 NEK5Q6P3R8 708 aa12.67□□□□□ -0.38
SMU1-201ENST00000397149 KIRREL3Q8IZU9 778 aa12.67□□□□□ -0.38
SMU1-201ENST00000397149 SERPINB12Q96P63 405 aa12.67□□□□□ -0.38
SMU1-201ENST00000397149 TMEM47Q9BQJ4 181 aa12.67□□□□□ -0.38
SMU1-201ENST00000397149 MKNK1Q9BUB5 465 aa12.67□□□□□ -0.38
SMU1-201ENST00000397149 NEK6Q9HC98 313 aa12.67□□□□□ -0.38
SMU1-201ENST00000397149 LIMD1Q9UGP4 676 aa12.67□□□□□ -0.38
SMU1-201ENST00000397149 TP73O15350 636 aa12.67□□□□□ -0.38
SMU1-201ENST00000397149 TCEA1P23193 301 aaKnown RBP12.67□□□□□ -0.38
SMU1-201ENST00000397149 GNASQ5JWF2 1037 aa12.67□□□□□ -0.38
SMU1-201ENST00000397149 PRAMEF18Q5VWM3 479 aa12.67□□□□□ -0.38
SMU1-201ENST00000397149 ZSWIM2Q8NEG5 633 aa12.67□□□□□ -0.38
SMU1-201ENST00000397149 SPATA4Q8NEY3 305 aa12.67□□□□□ -0.38
SMU1-201ENST00000397149 IFNAR1P17181 557 aa12.66□□□□□ -0.38
SMU1-201ENST00000397149 GARTP22102 1010 aa12.66□□□□□ -0.38
SMU1-201ENST00000397149 ACADLP28330 430 aa12.66□□□□□ -0.38
SMU1-201ENST00000397149 HSPA13P48723 471 aa12.66□□□□□ -0.38
SMU1-201ENST00000397149 RHOAP61586 193 aa12.66□□□□□ -0.38
SMU1-201ENST00000397149 PROSER3Q2NL68 480 aa12.66□□□□□ -0.38
SMU1-201ENST00000397149 DEFB128Q7Z7B8 93 aa12.66□□□□□ -0.38
SMU1-201ENST00000397149 SYNE4Q8N205 404 aa12.66□□□□□ -0.38
SMU1-201ENST00000397149 SSH2Q76I76 1423 aa12.66□□□□□ -0.38
SMU1-201ENST00000397149 CHP2O43745 196 aa12.66□□□□□ -0.38
SMU1-201ENST00000397149 CDH16O75309 829 aa12.66□□□□□ -0.38
SMU1-201ENST00000397149 SLC25A12O75746 678 aa12.66□□□□□ -0.38
SMU1-201ENST00000397149 CD2BP2O95400 341 aaKnown RBP12.66□□□□□ -0.38
SMU1-201ENST00000397149 CD4P01730 458 aa12.66□□□□□ -0.38
SMU1-201ENST00000397149 CYP2E1P05181 493 aaPredicted RBP12.66□□□□□ -0.38
SMU1-201ENST00000397149 PCSK1P29120 753 aa12.66□□□□□ -0.38
SMU1-201ENST00000397149 PYDC2Q56P42 97 aa12.66□□□□□ -0.38
SMU1-201ENST00000397149 SAMD3Q8N6K7 520 aa12.66□□□□□ -0.38
SMU1-201ENST00000397149 ARL10Q8N8L6 244 aa12.66□□□□□ -0.38
SMU1-201ENST00000397149 SETD6Q8TBK2 473 aa12.66□□□□□ -0.38
SMU1-201ENST00000397149 MAP4K1Q92918 833 aa12.66□□□□□ -0.38
SMU1-201ENST00000397149 COA1Q9GZY4 146 aa12.66□□□□□ -0.38
SMU1-201ENST00000397149 RACGAP1Q9H0H5 632 aa12.66□□□□□ -0.38
SMU1-201ENST00000397149 AKT2P31751 481 aa12.66□□□□□ -0.38
SMU1-201ENST00000397149 COPZ1P61923 177 aa12.66□□□□□ -0.38
SMU1-201ENST00000397149 EFEMP1Q12805 493 aa12.66□□□□□ -0.38
SMU1-201ENST00000397149 BNC2Q6ZN30 1099 aaPredicted RBP12.66□□□□□ -0.38
SMU1-201ENST00000397149 EID3Q8N140 333 aa12.66□□□□□ -0.38
SMU1-201ENST00000397149 RELTQ969Z4 430 aa12.66□□□□□ -0.38
SMU1-201ENST00000397149 SAE1Q9UBE0 346 aaPredicted RBP12.66□□□□□ -0.38
SMU1-201ENST00000397149 RGS12O14924 1447 aa12.66□□□□□ -0.38
SMU1-201ENST00000397149 MAGEA13PA6NCF6 341 aa12.66□□□□□ -0.38
SMU1-201ENST00000397149 DCLK1O15075 740 aa12.66□□□□□ -0.38
SMU1-201ENST00000397149 INPP4BO15327 924 aa12.66□□□□□ -0.38
SMU1-201ENST00000397149 EPN2O95208 641 aa12.66□□□□□ -0.38
SMU1-201ENST00000397149 GSTM5P46439 218 aa12.66□□□□□ -0.38
SMU1-201ENST00000397149 EFNA5P52803 228 aa12.66□□□□□ -0.38
SMU1-201ENST00000397149 OXCT1P55809 520 aa12.66□□□□□ -0.38
SMU1-201ENST00000397149 RAB2AP61019 212 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms