RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 ZBTB44Q8NCP5 570 aa13.9□□□□□ -0.19
SEC13-209ENST00000397117 TPCN2Q8NHX9 752 aa13.9□□□□□ -0.19
SEC13-209ENST00000397117 KIF18AQ8NI77 898 aa13.9□□□□□ -0.19
SEC13-209ENST00000397117 ZNF564Q8TBZ8 553 aaPredicted RBP13.9□□□□□ -0.19
SEC13-209ENST00000397117 WDR24Q96S15 920 aa13.9□□□□□ -0.19
SEC13-209ENST00000397117 KXD1Q9BQD3 176 aa13.9□□□□□ -0.19
SEC13-209ENST00000397117 HCFC1R1Q9NWW0 138 aa13.9□□□□□ -0.19
SEC13-209ENST00000397117 DNMT3BQ9UBC3 853 aaKnown RBP13.9□□□□□ -0.19
SEC13-209ENST00000397117 PCDHGA2Q9Y5H1 932 aa13.9□□□□□ -0.19
SEC13-209ENST00000397117 CAPN6Q9Y6Q1 641 aa13.9□□□□□ -0.19
SEC13-209ENST00000397117 KMT2BQ9UMN6 2715 aaPredicted RBP13.89□□□□□ -0.19
SEC13-209ENST00000397117 CTAGE9A4FU28 777 aa13.89□□□□□ -0.19
SEC13-209ENST00000397117 LILRB5O75023 590 aa13.89□□□□□ -0.19
SEC13-209ENST00000397117 PALMO75781 387 aa13.89□□□□□ -0.19
SEC13-209ENST00000397117 ERBB2P04626 1255 aa13.89□□□□□ -0.19
SEC13-209ENST00000397117 OR4Q2P0C623 313 aa13.89□□□□□ -0.19
SEC13-209ENST00000397117 CPB1P15086 417 aa13.89□□□□□ -0.19
SEC13-209ENST00000397117 OR1D2P34982 312 aa13.89□□□□□ -0.19
SEC13-209ENST00000397117 ACADSBP45954 432 aa13.89□□□□□ -0.19
SEC13-209ENST00000397117 PLA2G4AP47712 749 aa13.89□□□□□ -0.19
SEC13-209ENST00000397117 GABRB2P47870 512 aa13.89□□□□□ -0.19
SEC13-209ENST00000397117 ARPP19P56211 112 aa13.89□□□□□ -0.19
SEC13-209ENST00000397117 MAP3K7CLP57077 242 aa13.89□□□□□ -0.19
SEC13-209ENST00000397117 FZD5Q13467 585 aa13.89□□□□□ -0.19
SEC13-209ENST00000397117 MAMLD1Q13495 774 aa13.89□□□□□ -0.19
SEC13-209ENST00000397117 ZNF268Q14587 947 aaPredicted RBP13.89□□□□□ -0.19
SEC13-209ENST00000397117 POTEHQ6S545 545 aa13.89□□□□□ -0.19
SEC13-209ENST00000397117 PAQR9Q6ZVX9 377 aa13.89□□□□□ -0.19
SEC13-209ENST00000397117 RTL10Q7L3V2 364 aa13.89□□□□□ -0.19
SEC13-209ENST00000397117 DAAM2Q86T65 1068 aa13.89□□□□□ -0.19
SEC13-209ENST00000397117 NPAS3Q8IXF0 933 aa13.89□□□□□ -0.19
SEC13-209ENST00000397117 SYCE1Q8N0S2 351 aa13.89□□□□□ -0.19
SEC13-209ENST00000397117 SLC7A14Q8TBB6 771 aa13.89□□□□□ -0.19
SEC13-209ENST00000397117 HSFY1Q96LI6 401 aa13.89□□□□□ -0.19
SEC13-209ENST00000397117 PKMYT1Q99640 499 aa13.89□□□□□ -0.19
SEC13-209ENST00000397117 SLC4A5Q9BY07 1137 aa13.89□□□□□ -0.19
SEC13-209ENST00000397117 CYLDQ9NQC7 956 aa13.89□□□□□ -0.19
SEC13-209ENST00000397117 GRID2IPA4D2P6 1211 aa13.88□□□□□ -0.19
SEC13-209ENST00000397117 SHISA7A6NL88 538 aa13.88□□□□□ -0.19
SEC13-209ENST00000397117 E5RJQ4 531 aa13.88□□□□□ -0.19
SEC13-209ENST00000397117 GOLGA8SH3BPF8 625 aa13.88□□□□□ -0.19
SEC13-209ENST00000397117 TULP2O00295 520 aa13.88□□□□□ -0.19
SEC13-209ENST00000397117 PIK3R2O00459 728 aa13.88□□□□□ -0.19
SEC13-209ENST00000397117 MTA2O94776 668 aa13.88□□□□□ -0.19
SEC13-209ENST00000397117 BDNFP23560 247 aa13.88□□□□□ -0.19
SEC13-209ENST00000397117 HADHBP55084 474 aaKnown RBP13.88□□□□□ -0.19
SEC13-209ENST00000397117 OR6B2Q6IFH4 312 aa13.88□□□□□ -0.19
SEC13-209ENST00000397117 PLEKHA7Q6IQ23 1121 aa13.88□□□□□ -0.19
SEC13-209ENST00000397117 DCUN1D2Q6PH85 259 aa13.88□□□□□ -0.19
SEC13-209ENST00000397117 CLEC20AQ6ZU45 233 aa13.88□□□□□ -0.19
SEC13-209ENST00000397117 TMEM110Q86TL2 294 aa13.88□□□□□ -0.19
SEC13-209ENST00000397117 XYLT1Q86Y38 959 aa13.88□□□□□ -0.19
SEC13-209ENST00000397117 GPR161Q8N6U8 529 aaKnown RBP13.88□□□□□ -0.19
SEC13-209ENST00000397117 C3orf20Q8ND61 904 aa13.88□□□□□ -0.19
SEC13-209ENST00000397117 NELL2Q99435 816 aa13.88□□□□□ -0.19
SEC13-209ENST00000397117 NAPGQ99747 312 aaPredicted RBP13.88□□□□□ -0.19
SEC13-209ENST00000397117 SELENOOQ9BVL4 669 aa13.88□□□□□ -0.19
SEC13-209ENST00000397117 PLA2G2FQ9BZM2 168 aa13.88□□□□□ -0.19
SEC13-209ENST00000397117 TMLHEQ9NVH6 421 aa13.88□□□□□ -0.19
SEC13-209ENST00000397117 ZSCAN32Q9NX65 697 aa13.88□□□□□ -0.19
SEC13-209ENST00000397117 ABI2Q9NYB9 513 aaPredicted RBP13.88□□□□□ -0.19
SEC13-209ENST00000397117 NCDNQ9UBB6 729 aa13.88□□□□□ -0.19
SEC13-209ENST00000397117 MTRRQ9UBK8 725 aa13.88□□□□□ -0.19
SEC13-209ENST00000397117 ANAPC7Q9UJX3 599 aa13.88□□□□□ -0.19
SEC13-209ENST00000397117 ECI2O75521 394 aa13.87□□□□□ -0.19
SEC13-209ENST00000397117 LCP1P13796 627 aa13.87□□□□□ -0.19
SEC13-209ENST00000397117 TARSP26639 723 aaKnown RBP13.87□□□□□ -0.19
SEC13-209ENST00000397117 RPS9P46781 194 aaKnown RBP13.87□□□□□ -0.19
SEC13-209ENST00000397117 SMARCB1Q12824 385 aa13.87□□□□□ -0.19
SEC13-209ENST00000397117 PABPC1LQ4VXU2 614 aaKnown RBP13.87□□□□□ -0.19
SEC13-209ENST00000397117 PIGZQ86VD9 579 aa13.87□□□□□ -0.19
SEC13-209ENST00000397117 ZDHHC17Q8IUH5 632 aa13.87□□□□□ -0.19
SEC13-209ENST00000397117 FUBP3Q96I24 572 aaKnown RBP eCLIP13.87□□□□□ -0.19
SEC13-209ENST00000397117 EPC1Q9H2F5 836 aa13.87□□□□□ -0.19
SEC13-209ENST00000397117 LRRC4Q9HBW1 653 aa13.87□□□□□ -0.19
SEC13-209ENST00000397117 DMAP1Q9NPF5 467 aaPredicted RBP13.87□□□□□ -0.19
SEC13-209ENST00000397117 TJP2Q9UDY2 1190 aa13.87□□□□□ -0.19
SEC13-209ENST00000397117 JRKLQ9Y4A0 524 aa13.87□□□□□ -0.19
SEC13-209ENST00000397117 PCDHB5Q9Y5E4 795 aa13.87□□□□□ -0.19
SEC13-209ENST00000397117 BACE2Q9Y5Z0 518 aa13.87□□□□□ -0.19
SEC13-209ENST00000397117 TMEM110-MUSTN1A8MSY1 372 aa13.86□□□□□ -0.19
SEC13-209ENST00000397117 MYO1FO00160 1098 aa13.86□□□□□ -0.19
SEC13-209ENST00000397117 TBC1D4O60343 1298 aa13.86□□□□□ -0.19
SEC13-209ENST00000397117 BUB1BO60566 1050 aaPredicted RBP13.86□□□□□ -0.19
SEC13-209ENST00000397117 BEST1O76090 585 aa13.86□□□□□ -0.19
SEC13-209ENST00000397117 KRT3P12035 628 aa13.86□□□□□ -0.19
SEC13-209ENST00000397117 SDHBP21912 280 aa13.86□□□□□ -0.19
SEC13-209ENST00000397117 TGM1P22735 817 aa13.86□□□□□ -0.19
SEC13-209ENST00000397117 GRIK1P39086 918 aa13.86□□□□□ -0.19
SEC13-209ENST00000397117 ATXN1P54253 815 aaKnown RBP13.86□□□□□ -0.19
SEC13-209ENST00000397117 GSCP56915 257 aaPredicted RBP13.86□□□□□ -0.19
SEC13-209ENST00000397117 MESDQ14696 234 aa13.86□□□□□ -0.19
SEC13-209ENST00000397117 FAM102AQ5T9C2 384 aaPredicted RBP13.86□□□□□ -0.19
SEC13-209ENST00000397117 TPRG1Q6ZUI0 275 aa13.86□□□□□ -0.19
SEC13-209ENST00000397117 FAM183BPQ6ZVS7 135 aa13.86□□□□□ -0.19
SEC13-209ENST00000397117 SCUBE3Q8IX30 993 aa13.86□□□□□ -0.19
SEC13-209ENST00000397117 SIX6OS1Q8N1H7 587 aa13.86□□□□□ -0.19
SEC13-209ENST00000397117 ING5Q8WYH8 240 aa13.86□□□□□ -0.19
SEC13-209ENST00000397117 KCTD13Q8WZ19 329 aa13.86□□□□□ -0.19
SEC13-209ENST00000397117 MCEEQ96PE7 176 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms