RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 TXNRD3NBQ6F5E7 133 aa20.13■□□□□ 0.81
LMNB1-202ENST00000395354 TRNP1Q6NT89 227 aa20.13■□□□□ 0.81
LMNB1-202ENST00000395354 PAQR9Q6ZVX9 377 aa20.13■□□□□ 0.81
LMNB1-202ENST00000395354 DCP1BQ8IZD4 617 aaKnown RBP20.13■□□□□ 0.81
LMNB1-202ENST00000395354 ATL2Q8NHH9 583 aa20.13■□□□□ 0.81
LMNB1-202ENST00000395354 C1orf54Q8WWF1 131 aa20.13■□□□□ 0.81
LMNB1-202ENST00000395354 RAPGEF5Q92565 580 aa20.13■□□□□ 0.81
LMNB1-202ENST00000395354 FRMD8P1Q9BZ68 369 aaPredicted RBP20.13■□□□□ 0.81
LMNB1-202ENST00000395354 PRDM12Q9H4Q4 367 aa20.13■□□□□ 0.81
LMNB1-202ENST00000395354 CRTAC1Q9NQ79 661 aa20.13■□□□□ 0.81
LMNB1-202ENST00000395354 PI4K2BG5E9Z4 385 aa20.12■□□□□ 0.81
LMNB1-202ENST00000395354 PIK3R2O00459 728 aa20.12■□□□□ 0.81
LMNB1-202ENST00000395354 TEX28O15482 410 aa20.12■□□□□ 0.81
LMNB1-202ENST00000395354 GRIN2CQ14957 1233 aa20.12■□□□□ 0.81
LMNB1-202ENST00000395354 MDH1BQ5I0G3 518 aa20.12■□□□□ 0.81
LMNB1-202ENST00000395354 ZNF697Q5TEC3 545 aa20.12■□□□□ 0.81
LMNB1-202ENST00000395354 ALS2CLQ60I27 953 aa20.12■□□□□ 0.81
LMNB1-202ENST00000395354 FAM171BQ6P995 826 aa20.12■□□□□ 0.81
LMNB1-202ENST00000395354 MYCBPAPQ8TBZ2 947 aa20.12■□□□□ 0.81
LMNB1-202ENST00000395354 PIWIL1Q96J94 861 aaKnown RBP20.12■□□□□ 0.81
LMNB1-202ENST00000395354 KLHL5Q96PQ7 755 aa20.12■□□□□ 0.81
LMNB1-202ENST00000395354 EMILIN2Q9BXX0 1053 aa20.12■□□□□ 0.81
LMNB1-202ENST00000395354 ZWILCHQ9H900 591 aa20.12■□□□□ 0.81
LMNB1-202ENST00000395354 GAS8O95995 478 aa20.12■□□□□ 0.81
LMNB1-202ENST00000395354 FAM153BP0C7A2 387 aa20.12■□□□□ 0.81
LMNB1-202ENST00000395354 FAM200BP0CF97 657 aa20.12■□□□□ 0.81
LMNB1-202ENST00000395354 CPB1P15086 417 aa20.12■□□□□ 0.81
LMNB1-202ENST00000395354 KDELR1P24390 212 aa20.12■□□□□ 0.81
LMNB1-202ENST00000395354 HSPA9P38646 679 aaKnown RBP20.12■□□□□ 0.81
LMNB1-202ENST00000395354 NDUFV1P49821 464 aa20.12■□□□□ 0.81
LMNB1-202ENST00000395354 CDR1P51861 262 aa20.12■□□□□ 0.81
LMNB1-202ENST00000395354 GPR17Q13304 367 aa20.12■□□□□ 0.81
LMNB1-202ENST00000395354 MAPRE1Q15691 268 aaKnown RBP20.12■□□□□ 0.81
LMNB1-202ENST00000395354 FAM153CQ494X1 144 aa20.12■□□□□ 0.81
LMNB1-202ENST00000395354 SLC39A12Q504Y0 691 aa20.12■□□□□ 0.81
LMNB1-202ENST00000395354 BOLA3Q53S33 107 aa20.12■□□□□ 0.81
LMNB1-202ENST00000395354 ANKS1BQ7Z6G8 1248 aa20.12■□□□□ 0.81
LMNB1-202ENST00000395354 PIGZQ86VD9 579 aa20.12■□□□□ 0.81
LMNB1-202ENST00000395354 DDX42Q86XP3 938 aaKnown RBP eCLIP20.12■□□□□ 0.81
LMNB1-202ENST00000395354 TEKT4Q8WW24 435 aa20.12■□□□□ 0.81
LMNB1-202ENST00000395354 LRRC45Q96CN5 670 aa20.12■□□□□ 0.81
LMNB1-202ENST00000395354 MRPL38Q96DV4 380 aaKnown RBP20.12■□□□□ 0.81
LMNB1-202ENST00000395354 GDAP1L1Q96MZ0 367 aa20.12■□□□□ 0.81
LMNB1-202ENST00000395354 TBCBQ99426 244 aa20.12■□□□□ 0.81
LMNB1-202ENST00000395354 PKMYT1Q99640 499 aa20.12■□□□□ 0.81
LMNB1-202ENST00000395354 MED10Q9BTT4 135 aa20.12■□□□□ 0.81
LMNB1-202ENST00000395354 B3GNT5Q9BYG0 378 aa20.12■□□□□ 0.81
LMNB1-202ENST00000395354 MED4Q9NPJ6 270 aa20.12■□□□□ 0.81
LMNB1-202ENST00000395354 TMLHEQ9NVH6 421 aa20.12■□□□□ 0.81
LMNB1-202ENST00000395354 KLHL11Q9NVR0 708 aa20.12■□□□□ 0.81
LMNB1-202ENST00000395354 FAM153AQ9UHL3 310 aa20.12■□□□□ 0.81
LMNB1-202ENST00000395354 ROR1Q01973 937 aa20.11■□□□□ 0.81
LMNB1-202ENST00000395354 RAB33AQ14088 237 aa20.11■□□□□ 0.81
LMNB1-202ENST00000395354 CCDC142Q17RM4 750 aa20.11■□□□□ 0.81
LMNB1-202ENST00000395354 HABP4Q5JVS0 413 aaKnown RBP20.11■□□□□ 0.81
LMNB1-202ENST00000395354 CLEC20AQ6ZU45 233 aa20.11■□□□□ 0.81
LMNB1-202ENST00000395354 VSIG1Q86XK7 387 aa20.11■□□□□ 0.81
LMNB1-202ENST00000395354 TTC13Q8NBP0 860 aa20.11■□□□□ 0.81
LMNB1-202ENST00000395354 DPH5Q9H2P9 285 aa20.11■□□□□ 0.81
LMNB1-202ENST00000395354 R3HDM2Q9Y2K5 976 aaKnown RBP20.11■□□□□ 0.81
LMNB1-202ENST00000395354 PRPSAP2O60256 369 aa20.1■□□□□ 0.81
LMNB1-202ENST00000395354 ENDOD1O94919 500 aa20.1■□□□□ 0.81
LMNB1-202ENST00000395354 FBXO21O94952 628 aa20.1■□□□□ 0.81
LMNB1-202ENST00000395354 ADH1AP07327 375 aa20.1■□□□□ 0.81
LMNB1-202ENST00000395354 LCP1P13796 627 aa20.1■□□□□ 0.81
LMNB1-202ENST00000395354 KLRC2P26717 231 aa20.1■□□□□ 0.81
LMNB1-202ENST00000395354 KCNJ1P48048 391 aa20.1■□□□□ 0.81
LMNB1-202ENST00000395354 PTK6Q13882 451 aa20.1■□□□□ 0.81
LMNB1-202ENST00000395354 LLGL1Q15334 1064 aa20.1■□□□□ 0.81
LMNB1-202ENST00000395354 PPP1R7Q15435 360 aa20.1■□□□□ 0.81
LMNB1-202ENST00000395354 TAF5Q15542 800 aa20.1■□□□□ 0.81
LMNB1-202ENST00000395354 NFE2Q16621 373 aaPredicted RBP20.1■□□□□ 0.81
LMNB1-202ENST00000395354 FAM35AQ86V20 835 aa20.1■□□□□ 0.81
LMNB1-202ENST00000395354 KCTD6Q8NC69 237 aa20.1■□□□□ 0.81
LMNB1-202ENST00000395354 ZNF461Q8TAF7 563 aa20.1■□□□□ 0.81
LMNB1-202ENST00000395354 CENPIQ92674 756 aaPredicted RBP20.1■□□□□ 0.81
LMNB1-202ENST00000395354 PCED1BQ96HM7 432 aa20.1■□□□□ 0.81
LMNB1-202ENST00000395354 DDX23Q9BUQ8 820 aaKnown RBP20.1■□□□□ 0.81
LMNB1-202ENST00000395354 ZDHHC18Q9NUE0 388 aa20.1■□□□□ 0.81
LMNB1-202ENST00000395354 PCSK1NQ9UHG2 260 aa20.1■□□□□ 0.81
LMNB1-202ENST00000395354 DRG1Q9Y295 367 aaKnown RBP20.1■□□□□ 0.81
LMNB1-202ENST00000395354 WDR27A2RRH5 827 aa20.09■□□□□ 0.81
LMNB1-202ENST00000395354 CLDN5O00501 218 aa20.09■□□□□ 0.81
LMNB1-202ENST00000395354 HSF2BPO75031 334 aa20.09■□□□□ 0.81
LMNB1-202ENST00000395354 GRAP2O75791 330 aa20.09■□□□□ 0.81
LMNB1-202ENST00000395354 ABLIM3O94929 683 aa20.09■□□□□ 0.81
LMNB1-202ENST00000395354 KRT10P13645 584 aa20.09■□□□□ 0.81
LMNB1-202ENST00000395354 SMARCB1Q12824 385 aa20.09■□□□□ 0.81
LMNB1-202ENST00000395354 SNX1Q13596 522 aa20.09■□□□□ 0.81
LMNB1-202ENST00000395354 PDK2Q15119 407 aa20.09■□□□□ 0.81
LMNB1-202ENST00000395354 C15orf59Q2T9L4 293 aaPredicted RBP20.09■□□□□ 0.81
LMNB1-202ENST00000395354 SPDYCQ5MJ68 293 aa20.09■□□□□ 0.81
LMNB1-202ENST00000395354 KAZNQ674X7 775 aa20.09■□□□□ 0.81
LMNB1-202ENST00000395354 RNF19BQ6ZMZ0 732 aa20.09■□□□□ 0.81
LMNB1-202ENST00000395354 BBS12Q6ZW61 710 aa20.09■□□□□ 0.81
LMNB1-202ENST00000395354 ATG4AQ8WYN0 398 aa20.09■□□□□ 0.81
LMNB1-202ENST00000395354 CFAP57Q96MR6 1250 aa20.09■□□□□ 0.81
LMNB1-202ENST00000395354 FAM161BQ96MY7 647 aa20.09■□□□□ 0.81
LMNB1-202ENST00000395354 PGLYRP2Q96PD5 576 aa20.09■□□□□ 0.81
LMNB1-202ENST00000395354 TRIM31Q9BZY9 425 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms