RNA–Protein interactions for RNA: ENST00000381160.7

NPC1L1-202, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1L1, Length 4,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-202ENST00000381160 KLC2Q9H0B6 622 aa11.55□□□□□ -0.56
NPC1L1-202ENST00000381160 SEMA6AQ9H2E6 1030 aa11.55□□□□□ -0.56
NPC1L1-202ENST00000381160 USP29Q9HBJ7 922 aa11.55□□□□□ -0.56
NPC1L1-202ENST00000381160 GABBR1Q9UBS5 961 aa11.55□□□□□ -0.56
NPC1L1-202ENST00000381160 NUB1Q9Y5A7 615 aa11.55□□□□□ -0.56
NPC1L1-202ENST00000381160 SERPINB2P05120 415 aa11.54□□□□□ -0.56
NPC1L1-202ENST00000381160 VIL1P09327 827 aaKnown RBP11.54□□□□□ -0.56
NPC1L1-202ENST00000381160 DHRS4L1P0CG22 281 aa11.54□□□□□ -0.56
NPC1L1-202ENST00000381160 FGFR3P22607 806 aa11.54□□□□□ -0.56
NPC1L1-202ENST00000381160 POLR2BP30876 1174 aaKnown RBP11.54□□□□□ -0.56
NPC1L1-202ENST00000381160 OSTNP61366 133 aa11.54□□□□□ -0.56
NPC1L1-202ENST00000381160 TFAMQ00059 246 aaKnown RBP11.54□□□□□ -0.56
NPC1L1-202ENST00000381160 SLC18A2Q05940 514 aa11.54□□□□□ -0.56
NPC1L1-202ENST00000381160 PRKG1Q13976 671 aa11.54□□□□□ -0.56
NPC1L1-202ENST00000381160 DRICH1Q6PGQ1 229 aaPredicted RBP11.54□□□□□ -0.56
NPC1L1-202ENST00000381160 KYAT3Q6YP21 454 aaKnown RBP11.54□□□□□ -0.56
NPC1L1-202ENST00000381160 PHF13Q86YI8 300 aaPredicted RBP11.54□□□□□ -0.56
NPC1L1-202ENST00000381160 SIAH1Q8IUQ4 282 aa11.54□□□□□ -0.56
NPC1L1-202ENST00000381160 ZSCAN18Q8TBC5 510 aaPredicted RBP11.54□□□□□ -0.56
NPC1L1-202ENST00000381160 MZB1Q8WU39 189 aa11.54□□□□□ -0.56
NPC1L1-202ENST00000381160 BSNDQ8WZ55 320 aa11.54□□□□□ -0.56
NPC1L1-202ENST00000381160 TMA16Q96EY4 203 aaKnown RBP11.54□□□□□ -0.56
NPC1L1-202ENST00000381160 GMCL1Q96IK5 515 aa11.54□□□□□ -0.56
NPC1L1-202ENST00000381160 COA1Q9GZY4 146 aa11.54□□□□□ -0.56
NPC1L1-202ENST00000381160 TSPYL2Q9H2G4 693 aaPredicted RBP11.54□□□□□ -0.56
NPC1L1-202ENST00000381160 RNPEPQ9H4A4 650 aa11.54□□□□□ -0.56
NPC1L1-202ENST00000381160 XIRP1Q702N8 1843 aaKnown RBP11.54□□□□□ -0.56
NPC1L1-202ENST00000381160 CRTAMO95727 393 aa11.54□□□□□ -0.56
NPC1L1-202ENST00000381160 ART3Q13508 389 aa11.54□□□□□ -0.56
NPC1L1-202ENST00000381160 TRMT10BQ6PF06 316 aaKnown RBP11.54□□□□□ -0.56
NPC1L1-202ENST00000381160 FRMD7Q6ZUT3 714 aa11.54□□□□□ -0.56
NPC1L1-202ENST00000381160 DEPTORQ8TB45 409 aa11.54□□□□□ -0.56
NPC1L1-202ENST00000381160 NLRP7Q8WX94 980 aa11.54□□□□□ -0.56
NPC1L1-202ENST00000381160 VCPIP1Q96JH7 1222 aa11.54□□□□□ -0.56
NPC1L1-202ENST00000381160 ZFRQ96KR1 1074 aaKnown RBP11.54□□□□□ -0.56
NPC1L1-202ENST00000381160 CDRT15Q96T59 188 aa11.54□□□□□ -0.56
NPC1L1-202ENST00000381160 TRPV6Q9H1D0 765 aa11.54□□□□□ -0.56
NPC1L1-202ENST00000381160 APOBEC3GQ9HC16 384 aaKnown RBP11.54□□□□□ -0.56
NPC1L1-202ENST00000381160 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.54□□□□□ -0.56
NPC1L1-202ENST00000381160 DMTF1Q9Y222 760 aa11.54□□□□□ -0.56
NPC1L1-202ENST00000381160 GNEQ9Y223 722 aaKnown RBP11.54□□□□□ -0.56
NPC1L1-202ENST00000381160 COL22A1Q8NFW1 1626 aaPredicted RBP11.54□□□□□ -0.56
NPC1L1-202ENST00000381160 ZNF536O15090 1300 aa11.54□□□□□ -0.56
NPC1L1-202ENST00000381160 DDX60LQ5H9U9 1706 aaKnown RBP11.54□□□□□ -0.56
NPC1L1-202ENST00000381160 BBOX1O75936 387 aa11.54□□□□□ -0.56
NPC1L1-202ENST00000381160 SEC24DO94855 1032 aaPredicted RBP11.54□□□□□ -0.56
NPC1L1-202ENST00000381160 MAPTP10636 758 aaKnown RBP11.54□□□□□ -0.56
NPC1L1-202ENST00000381160 MMP8P22894 467 aa11.54□□□□□ -0.56
NPC1L1-202ENST00000381160 KDELR1P24390 212 aa11.54□□□□□ -0.56
NPC1L1-202ENST00000381160 WASHC5Q12768 1159 aa11.54□□□□□ -0.56
NPC1L1-202ENST00000381160 FSCBQ5H9T9 825 aa11.54□□□□□ -0.56
NPC1L1-202ENST00000381160 PHTF2Q8N3S3 785 aa11.54□□□□□ -0.56
NPC1L1-202ENST00000381160 FBXW8Q8N3Y1 598 aa11.54□□□□□ -0.56
NPC1L1-202ENST00000381160 TTLL6Q8N841 843 aa11.54□□□□□ -0.56
NPC1L1-202ENST00000381160 ADA2Q9NZK5 511 aa11.54□□□□□ -0.56
NPC1L1-202ENST00000381160 SLC17A6Q9P2U8 582 aa11.54□□□□□ -0.56
NPC1L1-202ENST00000381160 PCDHGB4Q9UN71 923 aa11.54□□□□□ -0.56
NPC1L1-202ENST00000381160 POLIQ9UNA4 740 aa11.54□□□□□ -0.56
NPC1L1-202ENST00000381160 PCDHGB5Q9Y5G0 923 aa11.54□□□□□ -0.56
NPC1L1-202ENST00000381160 VILLO15195 856 aa11.54□□□□□ -0.56
NPC1L1-202ENST00000381160 TFAP2AP05549 437 aa11.54□□□□□ -0.56
NPC1L1-202ENST00000381160 CSH1P0DML2 217 aa11.54□□□□□ -0.56
NPC1L1-202ENST00000381160 CSH2P0DML3 217 aa11.54□□□□□ -0.56
NPC1L1-202ENST00000381160 CDK4P11802 303 aa11.54□□□□□ -0.56
NPC1L1-202ENST00000381160 PSMC3P17980 439 aa11.54□□□□□ -0.56
NPC1L1-202ENST00000381160 CRADDP78560 199 aa11.54□□□□□ -0.56
NPC1L1-202ENST00000381160 LPIN1Q14693 890 aa11.54□□□□□ -0.56
NPC1L1-202ENST00000381160 UGT2A3Q6UWM9 527 aa11.54□□□□□ -0.56
NPC1L1-202ENST00000381160 RNF111Q6ZNA4 994 aa11.54□□□□□ -0.56
NPC1L1-202ENST00000381160 JOSD2Q8TAC2 188 aa11.54□□□□□ -0.56
NPC1L1-202ENST00000381160 LZICQ8WZA0 190 aa11.54□□□□□ -0.56
NPC1L1-202ENST00000381160 MFSD14AQ96MC6 490 aa11.54□□□□□ -0.56
NPC1L1-202ENST00000381160 PRICKLE1Q96MT3 831 aaPredicted RBP11.54□□□□□ -0.56
NPC1L1-202ENST00000381160 NUF2Q9BZD4 464 aa11.54□□□□□ -0.56
NPC1L1-202ENST00000381160 POLR3FQ9H1D9 316 aaPredicted RBP11.54□□□□□ -0.56
NPC1L1-202ENST00000381160 GPATCH2LQ9NWQ4 482 aa11.54□□□□□ -0.56
NPC1L1-202ENST00000381160 FIS1Q9Y3D6 152 aa11.54□□□□□ -0.56
NPC1L1-202ENST00000381160 CLRN2A0PK11 232 aa11.53□□□□□ -0.56
NPC1L1-202ENST00000381160 NFIBO00712 420 aa11.53□□□□□ -0.56
NPC1L1-202ENST00000381160 PPEF1O14829 653 aaPredicted RBP11.53□□□□□ -0.56
NPC1L1-202ENST00000381160 CASQ2O14958 399 aaPredicted RBP11.53□□□□□ -0.56
NPC1L1-202ENST00000381160 ZC3H11AO75152 810 aaKnown RBP eCLIP11.53□□□□□ -0.56
NPC1L1-202ENST00000381160 SPAG6O75602 509 aa11.53□□□□□ -0.56
NPC1L1-202ENST00000381160 CSPG5O95196 566 aa11.53□□□□□ -0.56
NPC1L1-202ENST00000381160 TBXAS1P24557 533 aaPredicted RBP11.53□□□□□ -0.56
NPC1L1-202ENST00000381160 IL1R2P27930 398 aa11.53□□□□□ -0.56
NPC1L1-202ENST00000381160 PCSK6P29122 969 aa11.53□□□□□ -0.56
NPC1L1-202ENST00000381160 TYK2P29597 1187 aa11.53□□□□□ -0.56
NPC1L1-202ENST00000381160 GJA8P48165 433 aa11.53□□□□□ -0.56
NPC1L1-202ENST00000381160 SESN2P58004 480 aaPredicted RBP11.53□□□□□ -0.56
NPC1L1-202ENST00000381160 MRPS5P82675 430 aaKnown RBP11.53□□□□□ -0.56
NPC1L1-202ENST00000381160 TMEM143Q96AN5 459 aa11.53□□□□□ -0.56
NPC1L1-202ENST00000381160 MRPS26Q9BYN8 205 aaKnown RBP11.53□□□□□ -0.56
NPC1L1-202ENST00000381160 NGRNQ9NPE2 291 aaKnown RBP11.53□□□□□ -0.56
NPC1L1-202ENST00000381160 CNTNAP2Q9UHC6 1331 aa11.53□□□□□ -0.56
NPC1L1-202ENST00000381160 ITGB4P16144 1822 aa11.53□□□□□ -0.56
NPC1L1-202ENST00000381160 PDLIM1O00151 329 aa11.53□□□□□ -0.56
NPC1L1-202ENST00000381160 ZNF252P-AS1Q0IIN9 211 aa11.53□□□□□ -0.56
NPC1L1-202ENST00000381160 TKFCQ3LXA3 575 aa11.53□□□□□ -0.56
NPC1L1-202ENST00000381160 HSF5Q4G112 596 aaPredicted RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms