RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 LOC102724159A0A0B4J2E5 919 aa16.51■□□□□ 0.23
COL2A1-202ENST00000380518 NCF1BA6NI72 391 aaPredicted RBP16.51■□□□□ 0.23
COL2A1-202ENST00000380518 NCF1CA8MVU1 366 aaPredicted RBP16.51■□□□□ 0.23
COL2A1-202ENST00000380518 NCF1P14598 390 aaPredicted RBP16.51■□□□□ 0.23
COL2A1-202ENST00000380518 NCKAP1LP55160 1127 aa16.51■□□□□ 0.23
COL2A1-202ENST00000380518 EFEMP1Q12805 493 aa16.51■□□□□ 0.23
COL2A1-202ENST00000380518 TBX2Q13207 712 aaPredicted RBP16.51■□□□□ 0.23
COL2A1-202ENST00000380518 PWP2Q15269 919 aaKnown RBP16.51■□□□□ 0.23
COL2A1-202ENST00000380518 CTXN3Q4LDR2 81 aa16.51■□□□□ 0.23
COL2A1-202ENST00000380518 ATP6AP1LQ52LC2 224 aa16.51■□□□□ 0.23
COL2A1-202ENST00000380518 ERMARDQ5T6L9 678 aa16.51■□□□□ 0.23
COL2A1-202ENST00000380518 IYDQ6PHW0 289 aa16.51■□□□□ 0.23
COL2A1-202ENST00000380518 OTOAQ7RTW8 1153 aa16.51■□□□□ 0.23
COL2A1-202ENST00000380518 TMC3Q7Z5M5 1100 aa16.51■□□□□ 0.23
COL2A1-202ENST00000380518 GPR141Q7Z602 305 aa16.51■□□□□ 0.23
COL2A1-202ENST00000380518 FAM83AQ86UY5 434 aa16.51■□□□□ 0.23
COL2A1-202ENST00000380518 TBC1D13Q9NVG8 400 aa16.51■□□□□ 0.23
COL2A1-202ENST00000380518 PCDHA3Q9Y5H8 950 aa16.51■□□□□ 0.23
COL2A1-202ENST00000380518 H3BRB1 525 aa16.5■□□□□ 0.23
COL2A1-202ENST00000380518 SLITRK3O94933 977 aa16.5■□□□□ 0.23
COL2A1-202ENST00000380518 CSHL1Q14406 222 aa16.5■□□□□ 0.23
COL2A1-202ENST00000380518 NIPA1Q7RTP0 329 aa16.5■□□□□ 0.23
COL2A1-202ENST00000380518 TUT1Q9H6E5 874 aaKnown RBP16.5■□□□□ 0.23
COL2A1-202ENST00000380518 SCUBE2Q9NQ36 999 aa16.5■□□□□ 0.23
COL2A1-202ENST00000380518 RRN3Q9NYV6 651 aa16.5■□□□□ 0.23
COL2A1-202ENST00000380518 IL1RAPL1Q9NZN1 696 aa16.5■□□□□ 0.23
COL2A1-202ENST00000380518 PPRC1Q5VV67 1664 aaKnown RBP16.5■□□□□ 0.23
COL2A1-202ENST00000380518 TECPR2O15040 1411 aa16.5■□□□□ 0.23
COL2A1-202ENST00000380518 SLC12A8A0AV02 714 aa16.5■□□□□ 0.23
COL2A1-202ENST00000380518 CYTH3O43739 400 aa16.5■□□□□ 0.23
COL2A1-202ENST00000380518 GUCA1CO95843 209 aa16.5■□□□□ 0.23
COL2A1-202ENST00000380518 CKMP06732 381 aa16.5■□□□□ 0.23
COL2A1-202ENST00000380518 TPBGLP0DKB5 382 aa16.5■□□□□ 0.23
COL2A1-202ENST00000380518 ELK3P41970 407 aa16.5■□□□□ 0.23
COL2A1-202ENST00000380518 ARMC6Q6NXE6 501 aa16.5■□□□□ 0.23
COL2A1-202ENST00000380518 DNAAF5Q86Y56 855 aa16.5■□□□□ 0.23
COL2A1-202ENST00000380518 SLC22A9Q8IVM8 553 aa16.5■□□□□ 0.23
COL2A1-202ENST00000380518 TDRD5Q8NAT2 981 aaKnown RBP16.5■□□□□ 0.23
COL2A1-202ENST00000380518 EMILIN2Q9BXX0 1053 aa16.5■□□□□ 0.23
COL2A1-202ENST00000380518 AVENQ9NQS1 362 aaPredicted RBP16.5■□□□□ 0.23
COL2A1-202ENST00000380518 PAIP2BQ9ULR5 123 aaKnown RBP16.5■□□□□ 0.23
COL2A1-202ENST00000380518 MBL2P11226 248 aaPredicted RBP16.5■□□□□ 0.23
COL2A1-202ENST00000380518 PDPK2PQ6A1A2 396 aa16.5■□□□□ 0.23
COL2A1-202ENST00000380518 ZDHHC17Q8IUH5 632 aa16.5■□□□□ 0.23
COL2A1-202ENST00000380518 KAT2BQ92831 832 aa16.5■□□□□ 0.23
COL2A1-202ENST00000380518 TSPAN16Q9UKR8 245 aa16.5■□□□□ 0.23
COL2A1-202ENST00000380518 DDX3XO00571 662 aaKnown RBP eCLIP16.5■□□□□ 0.233e-11■■■□□ 16
COL2A1-202ENST00000380518 PLA2G6O60733 806 aa16.5■□□□□ 0.23
COL2A1-202ENST00000380518 TOMM70O94826 608 aa16.5■□□□□ 0.23
COL2A1-202ENST00000380518 VIL1P09327 827 aaKnown RBP16.5■□□□□ 0.23
COL2A1-202ENST00000380518 GHRP10912 638 aa16.5■□□□□ 0.23
COL2A1-202ENST00000380518 GP5P40197 560 aa16.5■□□□□ 0.23
COL2A1-202ENST00000380518 ERVK-9P63128 1117 aa16.5■□□□□ 0.23
COL2A1-202ENST00000380518 ZPBP2Q6X784 338 aa16.5■□□□□ 0.23
COL2A1-202ENST00000380518 OTOP1Q7RTM1 612 aa16.5■□□□□ 0.23
COL2A1-202ENST00000380518 ASB7Q9H672 318 aa16.5■□□□□ 0.23
COL2A1-202ENST00000380518 RBM22Q9NW64 420 aaKnown RBP eCLIP16.5■□□□□ 0.23
COL2A1-202ENST00000380518 PYGMP11217 842 aa16.49■□□□□ 0.23
COL2A1-202ENST00000380518 ILDR2Q71H61 639 aa16.49■□□□□ 0.23
COL2A1-202ENST00000380518 OOSP2Q86WS3 158 aa16.49■□□□□ 0.23
COL2A1-202ENST00000380518 CENPLQ8N0S6 344 aaPredicted RBP16.49■□□□□ 0.23
COL2A1-202ENST00000380518 ADGRE3Q9BY15 652 aa16.49■□□□□ 0.23
COL2A1-202ENST00000380518 KIAA1683Q9H0B3 1180 aa16.49■□□□□ 0.23
COL2A1-202ENST00000380518 NT5MQ9NPB1 228 aa16.49■□□□□ 0.23
COL2A1-202ENST00000380518 C6orf203Q9P0P8 240 aaPredicted RBP16.49■□□□□ 0.23
COL2A1-202ENST00000380518 FRMPD4Q14CM0 1322 aa16.49■□□□□ 0.23
COL2A1-202ENST00000380518 CEP170BQ9Y4F5 1589 aaPredicted RBP16.49■□□□□ 0.23
COL2A1-202ENST00000380518 RHOCP08134 193 aa16.49■□□□□ 0.23
COL2A1-202ENST00000380518 CDH17Q12864 832 aa16.49■□□□□ 0.23
COL2A1-202ENST00000380518 C11orf96Q7Z7L8 435 aa16.49■□□□□ 0.23
COL2A1-202ENST00000380518 CYP2W1Q8TAV3 490 aa16.49■□□□□ 0.23
COL2A1-202ENST00000380518 BBS2Q9BXC9 721 aa16.49■□□□□ 0.23
COL2A1-202ENST00000380518 COPG1Q9Y678 874 aaKnown RBP16.49■□□□□ 0.23
COL2A1-202ENST00000380518 FAM86B1E9PN63 330 aa16.49■□□□□ 0.23
COL2A1-202ENST00000380518 RNF103O00237 685 aa16.49■□□□□ 0.23
COL2A1-202ENST00000380518 UBDO15205 165 aa16.49■□□□□ 0.23
COL2A1-202ENST00000380518 MPOP05164 745 aa16.49■□□□□ 0.23
COL2A1-202ENST00000380518 FAM86B2P0C5J1 330 aa16.49■□□□□ 0.23
COL2A1-202ENST00000380518 SOX10P56693 466 aa16.49■□□□□ 0.23
COL2A1-202ENST00000380518 PAN2Q504Q3 1202 aaKnown RBP16.49■□□□□ 0.23
COL2A1-202ENST00000380518 ARHGEF19Q8IW93 802 aa16.49■□□□□ 0.23
COL2A1-202ENST00000380518 ATXN2LQ8WWM7 1075 aaKnown RBP16.49■□□□□ 0.23
COL2A1-202ENST00000380518 GPRC5DQ9NZD1 345 aa16.49■□□□□ 0.23
COL2A1-202ENST00000380518 CTNNAL1Q9UBT7 734 aa16.49■□□□□ 0.23
COL2A1-202ENST00000380518 VPS28Q9UK41 221 aa16.49■□□□□ 0.23
COL2A1-202ENST00000380518 ZSCAN5CA6NGD5 496 aaPredicted RBP16.49■□□□□ 0.23
COL2A1-202ENST00000380518 SNTNA6NMZ2 147 aa16.49■□□□□ 0.23
COL2A1-202ENST00000380518 NR5A2O00482 541 aa16.49■□□□□ 0.23
COL2A1-202ENST00000380518 RARAP10276 462 aa16.49■□□□□ 0.23
COL2A1-202ENST00000380518 RPL21P46778 160 aaKnown RBP16.49■□□□□ 0.23
COL2A1-202ENST00000380518 RHOAP61586 193 aa16.49■□□□□ 0.23
COL2A1-202ENST00000380518 PRKAA1Q13131 559 aa16.49■□□□□ 0.23
COL2A1-202ENST00000380518 MEA1Q16626 185 aa16.49■□□□□ 0.23
COL2A1-202ENST00000380518 CCDC142Q17RM4 750 aa16.49■□□□□ 0.23
COL2A1-202ENST00000380518 NT5DC3Q86UY8 548 aa16.49■□□□□ 0.23
COL2A1-202ENST00000380518 SRPK1Q96SB4 655 aaKnown RBP16.49■□□□□ 0.23
COL2A1-202ENST00000380518 TCF7L2Q9NQB0 619 aa16.49■□□□□ 0.23
COL2A1-202ENST00000380518 SERPINE1P05121 402 aa16.48■□□□□ 0.23
COL2A1-202ENST00000380518 FCGR1AP12314 374 aa16.48■□□□□ 0.23
COL2A1-202ENST00000380518 CD151P48509 253 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms