RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 SETD7Q8WTS6 366 aaKnown RBP18.78■□□□□ 0.6
PDLIM4-202ENST00000379018 GABRG3Q99928 467 aa18.78■□□□□ 0.6
PDLIM4-202ENST00000379018 KLF16Q9BXK1 252 aaPredicted RBP18.78■□□□□ 0.6
PDLIM4-202ENST00000379018 GZF1Q9H116 711 aaPredicted RBP18.78■□□□□ 0.6
PDLIM4-202ENST00000379018 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.78■□□□□ 0.6
PDLIM4-202ENST00000379018 WDR35Q9P2L0 1181 aa18.78■□□□□ 0.6
PDLIM4-202ENST00000379018 HMGXB4Q9UGU5 601 aa18.78■□□□□ 0.6
PDLIM4-202ENST00000379018 STARD13Q9Y3M8 1113 aa18.78■□□□□ 0.6
PDLIM4-202ENST00000379018 STAU1O95793 577 aaKnown RBP18.77■□□□□ 0.6
PDLIM4-202ENST00000379018 CD6P30203 668 aa18.77■□□□□ 0.6
PDLIM4-202ENST00000379018 AMPD3Q01432 767 aa18.77■□□□□ 0.6
PDLIM4-202ENST00000379018 NCOA4Q13772 614 aa18.77■□□□□ 0.6
PDLIM4-202ENST00000379018 COL28A1Q2UY09 1125 aa18.77■□□□□ 0.6
PDLIM4-202ENST00000379018 HTR3DQ70Z44 454 aa18.77■□□□□ 0.6
PDLIM4-202ENST00000379018 GPRIN1Q7Z2K8 1008 aa18.77■□□□□ 0.6
PDLIM4-202ENST00000379018 MDM1Q8TC05 714 aa18.77■□□□□ 0.6
PDLIM4-202ENST00000379018 PLEKHO2Q8TD55 490 aa18.77■□□□□ 0.6
PDLIM4-202ENST00000379018 FOXJ1Q92949 421 aa18.77■□□□□ 0.6
PDLIM4-202ENST00000379018 TOE1Q96GM8 510 aaKnown RBP18.77■□□□□ 0.6
PDLIM4-202ENST00000379018 ZNF419Q96HQ0 510 aaPredicted RBP18.77■□□□□ 0.6
PDLIM4-202ENST00000379018 GPR174Q9BXC1 333 aa18.77■□□□□ 0.6
PDLIM4-202ENST00000379018 BLZF1Q9H2G9 400 aa18.77■□□□□ 0.6
PDLIM4-202ENST00000379018 FBXO44Q9H4M3 255 aa18.77■□□□□ 0.6
PDLIM4-202ENST00000379018 CCDC86Q9H6F5 360 aaKnown RBP18.77■□□□□ 0.6
PDLIM4-202ENST00000379018 CD248Q9HCU0 757 aa18.77■□□□□ 0.6
PDLIM4-202ENST00000379018 SLC39A2Q9NP94 309 aa18.77■□□□□ 0.6
PDLIM4-202ENST00000379018 KBTBD4Q9NVX7 518 aa18.77■□□□□ 0.6
PDLIM4-202ENST00000379018 IL37Q9NZH6 218 aa18.77■□□□□ 0.6
PDLIM4-202ENST00000379018 GPSM3Q9Y4H4 160 aa18.77■□□□□ 0.6
PDLIM4-202ENST00000379018 PLXNB3Q9ULL4 1909 aa18.76■□□□□ 0.59
PDLIM4-202ENST00000379018 GOLGA8CPA6NN73 597 aa18.76■□□□□ 0.59
PDLIM4-202ENST00000379018 GJB3O75712 270 aa18.76■□□□□ 0.59
PDLIM4-202ENST00000379018 NCAM1P13591 858 aa18.76■□□□□ 0.59
PDLIM4-202ENST00000379018 ATP5C1P36542 298 aaKnown RBP18.76■□□□□ 0.59
PDLIM4-202ENST00000379018 SLC14A1Q13336 389 aa18.76■□□□□ 0.59
PDLIM4-202ENST00000379018 STARD3Q14849 445 aa18.76■□□□□ 0.59
PDLIM4-202ENST00000379018 E2F4Q16254 413 aa18.76■□□□□ 0.59
PDLIM4-202ENST00000379018 PDZD3Q86UT5 571 aa18.76■□□□□ 0.59
PDLIM4-202ENST00000379018 ADAMTS14Q8WXS8 1223 aa18.76■□□□□ 0.59
PDLIM4-202ENST00000379018 IL21RQ9HBE5 538 aa18.76■□□□□ 0.59
PDLIM4-202ENST00000379018 COMMD8Q9NX08 183 aa18.76■□□□□ 0.59
PDLIM4-202ENST00000379018 OSER1Q9NX31 292 aa18.76■□□□□ 0.59
PDLIM4-202ENST00000379018 STON1Q9Y6Q2 735 aa18.76■□□□□ 0.59
PDLIM4-202ENST00000379018 UBE4BO95155 1302 aa18.75■□□□□ 0.59
PDLIM4-202ENST00000379018 A0A1W2PQH9 124 aa18.75■□□□□ 0.59
PDLIM4-202ENST00000379018 FAM221BA6H8Z2 402 aa18.75■□□□□ 0.59
PDLIM4-202ENST00000379018 LRRIQ3A6PVS8 624 aaPredicted RBP18.75■□□□□ 0.59
PDLIM4-202ENST00000379018 GREM1O60565 184 aa18.75■□□□□ 0.59
PDLIM4-202ENST00000379018 NDST1P52848 882 aa18.75■□□□□ 0.59
PDLIM4-202ENST00000379018 FUT11Q495W5 492 aa18.75■□□□□ 0.59
PDLIM4-202ENST00000379018 C10orf120Q5SQS8 335 aa18.75■□□□□ 0.59
PDLIM4-202ENST00000379018 C12orf29Q8N999 325 aa18.75■□□□□ 0.59
PDLIM4-202ENST00000379018 HNRNPLLQ8WVV9 542 aaKnown RBP18.75■□□□□ 0.59
PDLIM4-202ENST00000379018 SNX19Q92543 992 aa18.75■□□□□ 0.59
PDLIM4-202ENST00000379018 PRDM16Q9HAZ2 1276 aa18.75■□□□□ 0.59
PDLIM4-202ENST00000379018 MARK1Q9P0L2 795 aa18.75■□□□□ 0.59
PDLIM4-202ENST00000379018 APOBEC2Q9Y235 224 aaKnown RBP18.75■□□□□ 0.59
PDLIM4-202ENST00000379018 ACACAQ13085 2346 aa18.75■□□□□ 0.59
PDLIM4-202ENST00000379018 A0A1B0GTW7 788 aa18.74■□□□□ 0.59
PDLIM4-202ENST00000379018 FAM92AA1XBS5 289 aa18.74■□□□□ 0.59
PDLIM4-202ENST00000379018 KIF20AO95235 890 aa18.74■□□□□ 0.59
PDLIM4-202ENST00000379018 HMBSP08397 361 aa18.74■□□□□ 0.59
PDLIM4-202ENST00000379018 CISD3P0C7P0 127 aa18.74■□□□□ 0.59
PDLIM4-202ENST00000379018 FAM200BP0CF97 657 aa18.74■□□□□ 0.59
PDLIM4-202ENST00000379018 RARGP13631 454 aa18.74■□□□□ 0.59
PDLIM4-202ENST00000379018 ACO1P21399 889 aaKnown RBP18.74■□□□□ 0.59
PDLIM4-202ENST00000379018 CUL4AQ13619 759 aa18.74■□□□□ 0.59
PDLIM4-202ENST00000379018 DCAF12L1Q5VU92 463 aa18.74■□□□□ 0.59
PDLIM4-202ENST00000379018 SPOPLQ6IQ16 392 aa18.74■□□□□ 0.59
PDLIM4-202ENST00000379018 UNC13DQ70J99 1090 aa18.74■□□□□ 0.59
PDLIM4-202ENST00000379018 SLCO6A1Q86UG4 719 aa18.74■□□□□ 0.59
PDLIM4-202ENST00000379018 MARCH9Q86YJ5 346 aa18.74■□□□□ 0.59
PDLIM4-202ENST00000379018 DUSP9Q99956 384 aaKnown RBP18.74■□□□□ 0.59
PDLIM4-202ENST00000379018 GAREM1Q9H706 876 aa18.74■□□□□ 0.59
PDLIM4-202ENST00000379018 NMUR1Q9HB89 426 aa18.74■□□□□ 0.59
PDLIM4-202ENST00000379018 RAXQ9Y2V3 346 aa18.74■□□□□ 0.59
PDLIM4-202ENST00000379018 SPTLC2O15270 562 aa18.73■□□□□ 0.59
PDLIM4-202ENST00000379018 SYNCRIPO60506 623 aaKnown RBP18.73■□□□□ 0.59
PDLIM4-202ENST00000379018 VNN1O95497 513 aa18.73■□□□□ 0.59
PDLIM4-202ENST00000379018 CAPNS1P04632 268 aa18.73■□□□□ 0.59
PDLIM4-202ENST00000379018 P4HA1P13674 534 aa18.73■□□□□ 0.59
PDLIM4-202ENST00000379018 IL12RB1P42701 662 aa18.73■□□□□ 0.59
PDLIM4-202ENST00000379018 CCDC157Q569K6 752 aa18.73■□□□□ 0.59
PDLIM4-202ENST00000379018 CCNI2Q6ZMN8 369 aaPredicted RBP18.73■□□□□ 0.59
PDLIM4-202ENST00000379018 FAM124AQ86V42 546 aa18.73■□□□□ 0.59
PDLIM4-202ENST00000379018 IQUBQ8NA54 791 aa18.73■□□□□ 0.59
PDLIM4-202ENST00000379018 MKRN2Q9H000 416 aaKnown RBP18.73■□□□□ 0.59
PDLIM4-202ENST00000379018 CUEDC2Q9H467 287 aa18.73■□□□□ 0.59
PDLIM4-202ENST00000379018 VRTNQ9H8Y1 702 aa18.73■□□□□ 0.59
PDLIM4-202ENST00000379018 CYLDQ9NQC7 956 aa18.73■□□□□ 0.59
PDLIM4-202ENST00000379018 WSB2Q9NYS7 404 aaPredicted RBP18.73■□□□□ 0.59
PDLIM4-202ENST00000379018 TFIP11Q9UBB9 837 aaKnown RBP18.73■□□□□ 0.59
PDLIM4-202ENST00000379018 DNMT3LQ9UJW3 386 aa18.73■□□□□ 0.59
PDLIM4-202ENST00000379018 NAGPAQ9UK23 515 aa18.73■□□□□ 0.59
PDLIM4-202ENST00000379018 PCOLCE2Q9UKZ9 415 aa18.73■□□□□ 0.59
PDLIM4-202ENST00000379018 MTMR6Q9Y217 621 aa18.73■□□□□ 0.59
PDLIM4-202ENST00000379018 FNDC3AQ9Y2H6 1198 aaKnown RBP18.73■□□□□ 0.59
PDLIM4-202ENST00000379018 PTPRBP23467 1997 aa18.73■□□□□ 0.59
PDLIM4-202ENST00000379018 ITPR1Q14643 2758 aa18.73■□□□□ 0.59
PDLIM4-202ENST00000379018 APC2O95996 2303 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms