RNA–Protein interactions for RNA: ENST00000376406.7

MDC1-201, Transcript of mediator of DNA damage checkpoint 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene MDC1, Length 7,576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-201ENST00000376406 ANXA11P50995 505 aaKnown RBP11.32□□□□□ -0.6
MDC1-201ENST00000376406 ATN1P54259 1190 aaPredicted RBP11.32□□□□□ -0.6
MDC1-201ENST00000376406 ACOT1Q86TX2 421 aa11.32□□□□□ -0.6
MDC1-201ENST00000376406 METTL3Q86U44 580 aaKnown RBP11.32□□□□□ -0.6
MDC1-201ENST00000376406 CREG2Q8IUH2 290 aa11.32□□□□□ -0.6
MDC1-201ENST00000376406 SMARCD1Q96GM5 515 aa11.32□□□□□ -0.6
MDC1-201ENST00000376406 HEY2Q9UBP5 337 aa11.32□□□□□ -0.6
MDC1-201ENST00000376406 NCKAP1Q9Y2A7 1128 aa11.32□□□□□ -0.6
MDC1-201ENST00000376406 INSRRP14616 1297 aa11.32□□□□□ -0.6
MDC1-201ENST00000376406 TM4SF1P30408 202 aa11.32□□□□□ -0.6
MDC1-201ENST00000376406 SKP1P63208 163 aa11.32□□□□□ -0.6
MDC1-201ENST00000376406 SV2AQ7L0J3 742 aa11.32□□□□□ -0.6
MDC1-201ENST00000376406 NECAB2Q7Z6G3 386 aa11.32□□□□□ -0.6
MDC1-201ENST00000376406 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.32□□□□□ -0.6
MDC1-201ENST00000376406 CYP3A7-CYP3A51PA0A087WV96 503 aa11.32□□□□□ -0.6
MDC1-201ENST00000376406 CCDC78A2IDD5 438 aa11.32□□□□□ -0.6
MDC1-201ENST00000376406 GLTPD2A6NH11 291 aa11.32□□□□□ -0.6
MDC1-201ENST00000376406 C16orf96A6NNT2 1141 aa11.32□□□□□ -0.6
MDC1-201ENST00000376406 MAP3K13O43283 966 aa11.32□□□□□ -0.6
MDC1-201ENST00000376406 HMGCRP04035 888 aa11.32□□□□□ -0.6
MDC1-201ENST00000376406 HMBSP08397 361 aa11.32□□□□□ -0.6
MDC1-201ENST00000376406 CYP3A7P24462 503 aa11.32□□□□□ -0.6
MDC1-201ENST00000376406 KCNK10P57789 538 aa11.32□□□□□ -0.6
MDC1-201ENST00000376406 ORC1Q13415 861 aa11.32□□□□□ -0.6
MDC1-201ENST00000376406 CYTH1Q15438 398 aa11.32□□□□□ -0.6
MDC1-201ENST00000376406 AMHR2Q16671 573 aa11.32□□□□□ -0.6
MDC1-201ENST00000376406 NUP93Q8N1F7 819 aa11.32□□□□□ -0.6
MDC1-201ENST00000376406 DMGDHQ9UI17 866 aaKnown RBP11.32□□□□□ -0.6
MDC1-201ENST00000376406 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.32□□□□□ -0.6
MDC1-201ENST00000376406 CDH2P19022 906 aaPredicted RBP11.32□□□□□ -0.6
MDC1-201ENST00000376406 CRY2Q49AN0 593 aa11.32□□□□□ -0.6
MDC1-201ENST00000376406 SH3GL3Q99963 347 aa11.32□□□□□ -0.6
MDC1-201ENST00000376406 SHOC2Q9UQ13 582 aa11.32□□□□□ -0.6
MDC1-201ENST00000376406 CYTH3O43739 400 aa11.31□□□□□ -0.6
MDC1-201ENST00000376406 CLASP2O75122 1294 aaKnown RBP11.31□□□□□ -0.6
MDC1-201ENST00000376406 ZNF286BP0CG31 522 aa11.31□□□□□ -0.6
MDC1-201ENST00000376406 KCNA4P22459 653 aa11.31□□□□□ -0.6
MDC1-201ENST00000376406 VCPP55072 806 aaKnown RBP11.31□□□□□ -0.6
MDC1-201ENST00000376406 MYL6P60660 151 aa11.31□□□□□ -0.6
MDC1-201ENST00000376406 MAP3K10Q02779 954 aa11.31□□□□□ -0.6
MDC1-201ENST00000376406 HIST2H2ACQ16777 129 aaPredicted RBP11.31□□□□□ -0.6
MDC1-201ENST00000376406 LRRC36Q1X8D7 754 aa11.31□□□□□ -0.6
MDC1-201ENST00000376406 PPM1LQ5SGD2 360 aa11.31□□□□□ -0.6
MDC1-201ENST00000376406 HIST2H2AA3Q6FI13 130 aa11.31□□□□□ -0.6
MDC1-201ENST00000376406 OVOS1Q6IE37 1185 aa11.31□□□□□ -0.6
MDC1-201ENST00000376406 ARID3BQ8IVW6 561 aaPredicted RBP11.31□□□□□ -0.6
MDC1-201ENST00000376406 TEKT4Q8WW24 435 aa11.31□□□□□ -0.6
MDC1-201ENST00000376406 TLR10Q9BXR5 811 aa11.31□□□□□ -0.6
MDC1-201ENST00000376406 AKAP7Q9P0M2 348 aaPredicted RBP11.31□□□□□ -0.6
MDC1-201ENST00000376406 RPS6KL1Q9Y6S9 549 aa11.31□□□□□ -0.6
MDC1-201ENST00000376406 VTNP04004 478 aa11.31□□□□□ -0.6
MDC1-201ENST00000376406 RARRES1P49788 294 aa11.31□□□□□ -0.6
MDC1-201ENST00000376406 NCKAP1LP55160 1127 aa11.31□□□□□ -0.6
MDC1-201ENST00000376406 COBLL1Q53SF7 1204 aa11.31□□□□□ -0.6
MDC1-201ENST00000376406 SLC26A11Q86WA9 606 aa11.31□□□□□ -0.6
MDC1-201ENST00000376406 LRRC40Q9H9A6 602 aa11.31□□□□□ -0.6
MDC1-201ENST00000376406 KCNMB3Q9NPA1 279 aa11.31□□□□□ -0.6
MDC1-201ENST00000376406 DDX20Q9UHI6 824 aaKnown RBP11.31□□□□□ -0.6
MDC1-201ENST00000376406 RAB23Q9ULC3 237 aa11.31□□□□□ -0.6
MDC1-201ENST00000376406 MRC1P22897 1456 aa11.31□□□□□ -0.6
MDC1-201ENST00000376406 TBKBP1A7MCY6 615 aa11.31□□□□□ -0.6
MDC1-201ENST00000376406 HNRNPRO43390 633 aaKnown RBP11.31□□□□□ -0.6
MDC1-201ENST00000376406 FOXD4Q12950 439 aaPredicted RBP11.31□□□□□ -0.6
MDC1-201ENST00000376406 C2CD6Q53TS8 623 aa11.31□□□□□ -0.6
MDC1-201ENST00000376406 ZCCHC2Q9C0B9 1178 aaKnown RBP11.31□□□□□ -0.6
MDC1-201ENST00000376406 SENP6Q9GZR1 1112 aaPredicted RBP11.31□□□□□ -0.6
MDC1-201ENST00000376406 BARX2Q9UMQ3 279 aaPredicted RBP11.31□□□□□ -0.6
MDC1-201ENST00000376406 HNRNPCL2B2RXH8 293 aa11.31□□□□□ -0.6
MDC1-201ENST00000376406 EPHB2P29323 1055 aa11.31□□□□□ -0.6
MDC1-201ENST00000376406 PSEN1P49768 467 aa11.31□□□□□ -0.6
MDC1-201ENST00000376406 BST2Q10589 180 aaKnown RBP11.31□□□□□ -0.6
MDC1-201ENST00000376406 ERMARDQ5T6L9 678 aa11.31□□□□□ -0.6
MDC1-201ENST00000376406 TATDN2Q93075 761 aa11.31□□□□□ -0.6
MDC1-201ENST00000376406 C17orf80Q9BSJ5 609 aa11.31□□□□□ -0.6
MDC1-201ENST00000376406 ADNPQ9H2P0 1102 aa11.31□□□□□ -0.6
MDC1-201ENST00000376406 AVENQ9NQS1 362 aaPredicted RBP11.31□□□□□ -0.6
MDC1-201ENST00000376406 DDIT4Q9NX09 232 aa11.31□□□□□ -0.6
MDC1-201ENST00000376406 HAO1Q9UJM8 370 aa11.31□□□□□ -0.6
MDC1-201ENST00000376406 FBXL21Q9UKT6 434 aa11.31□□□□□ -0.6
MDC1-201ENST00000376406 AP4E1Q9UPM8 1137 aa11.31□□□□□ -0.6
MDC1-201ENST00000376406 BAZ2AQ9UIF9 1905 aaKnown RBP11.31□□□□□ -0.6
MDC1-201ENST00000376406 POLR2LP62875 67 aaKnown RBP11.31□□□□□ -0.6
MDC1-201ENST00000376406 FLOT2Q14254 428 aa11.31□□□□□ -0.6
MDC1-201ENST00000376406 ZNF284Q2VY69 593 aa11.31□□□□□ -0.6
MDC1-201ENST00000376406 P2RX7Q99572 595 aaKnown RBP11.31□□□□□ -0.6
MDC1-201ENST00000376406 RUBCNLQ9H714 662 aa11.31□□□□□ -0.6
MDC1-201ENST00000376406 SCUBE2Q9NQ36 999 aa11.31□□□□□ -0.6
MDC1-201ENST00000376406 CHST12Q9NRB3 414 aa11.31□□□□□ -0.6
MDC1-201ENST00000376406 PCDHGC5Q9Y5F6 944 aa11.31□□□□□ -0.6
MDC1-201ENST00000376406 SEC24DO94855 1032 aaPredicted RBP11.31□□□□□ -0.6
MDC1-201ENST00000376406 RPL21P46778 160 aaKnown RBP11.31□□□□□ -0.6
MDC1-201ENST00000376406 CLCN3P51790 818 aa11.31□□□□□ -0.6
MDC1-201ENST00000376406 PTPN11Q06124 597 aaPredicted RBP11.31□□□□□ -0.6
MDC1-201ENST00000376406 MTM1Q13496 603 aa11.31□□□□□ -0.6
MDC1-201ENST00000376406 PAN2Q504Q3 1202 aaKnown RBP11.31□□□□□ -0.6
MDC1-201ENST00000376406 TTC30BQ8N4P2 665 aa11.31□□□□□ -0.6
MDC1-201ENST00000376406 ATXN2LQ8WWM7 1075 aaKnown RBP11.31□□□□□ -0.6
MDC1-201ENST00000376406 CYGBQ8WWM9 190 aa11.31□□□□□ -0.6
MDC1-201ENST00000376406 FAM162AQ96A26 154 aa11.31□□□□□ -0.6
MDC1-201ENST00000376406 RUVBL2Q9Y230 463 aaKnown RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms