RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 BCAR1P56945 870 aa18.73■□□□□ 0.59
HLA-DQB1-201ENST00000374943 DSC1Q08554 894 aa18.73■□□□□ 0.59
HLA-DQB1-201ENST00000374943 MAPRE1Q15691 268 aaKnown RBP18.73■□□□□ 0.59
HLA-DQB1-201ENST00000374943 SCML4Q8N228 414 aa18.73■□□□□ 0.59
HLA-DQB1-201ENST00000374943 CCDC185Q8N715 623 aa18.73■□□□□ 0.59
HLA-DQB1-201ENST00000374943 ZNF296Q8WUU4 475 aaPredicted RBP18.73■□□□□ 0.59
HLA-DQB1-201ENST00000374943 PWWP2AQ96N64 755 aa18.73■□□□□ 0.59
HLA-DQB1-201ENST00000374943 TTC25Q96NG3 672 aa18.73■□□□□ 0.59
HLA-DQB1-201ENST00000374943 KCTD15Q96SI1 283 aaPredicted RBP18.73■□□□□ 0.59
HLA-DQB1-201ENST00000374943 ULBP1Q9BZM6 244 aa18.73■□□□□ 0.59
HLA-DQB1-201ENST00000374943 STMN4Q9H169 189 aaPredicted RBP18.73■□□□□ 0.59
HLA-DQB1-201ENST00000374943 DHX35Q9H5Z1 703 aaKnown RBP18.73■□□□□ 0.59
HLA-DQB1-201ENST00000374943 TMEM30AQ9NV96 361 aa18.73■□□□□ 0.59
HLA-DQB1-201ENST00000374943 BCCIPQ9P287 314 aaKnown RBP eCLIP18.73■□□□□ 0.59
HLA-DQB1-201ENST00000374943 FZD10Q9ULW2 581 aa18.73■□□□□ 0.59
HLA-DQB1-201ENST00000374943 VWA8A3KMH1 1905 aa18.72■□□□□ 0.59
HLA-DQB1-201ENST00000374943 BCLAF3A2AJT9 711 aaKnown RBP18.72■□□□□ 0.59
HLA-DQB1-201ENST00000374943 I3L4J1 428 aa18.72■□□□□ 0.59
HLA-DQB1-201ENST00000374943 RASGRF2O14827 1237 aa18.72■□□□□ 0.59
HLA-DQB1-201ENST00000374943 MAGEA4P43358 317 aa18.72■□□□□ 0.59
HLA-DQB1-201ENST00000374943 CDK7P50613 346 aa18.72■□□□□ 0.59
HLA-DQB1-201ENST00000374943 IRAK1P51617 712 aa18.72■□□□□ 0.59
HLA-DQB1-201ENST00000374943 CACNA2D1P54289 1103 aa18.72■□□□□ 0.59
HLA-DQB1-201ENST00000374943 PPP2R2AP63151 447 aa18.72■□□□□ 0.59
HLA-DQB1-201ENST00000374943 KYNUQ16719 465 aa18.72■□□□□ 0.59
HLA-DQB1-201ENST00000374943 DCAF6Q58WW2 860 aa18.72■□□□□ 0.59
HLA-DQB1-201ENST00000374943 CLLU1OSQ5K130 101 aa18.72■□□□□ 0.59
HLA-DQB1-201ENST00000374943 DARS2Q6PI48 645 aaKnown RBP18.72■□□□□ 0.59
HLA-DQB1-201ENST00000374943 LEKR1Q6ZMV7 388 aa18.72■□□□□ 0.59
HLA-DQB1-201ENST00000374943 NAT8LQ8N9F0 302 aa18.72■□□□□ 0.59
HLA-DQB1-201ENST00000374943 IRGQQ8WZA9 623 aa18.72■□□□□ 0.59
HLA-DQB1-201ENST00000374943 CPT1BQ92523 772 aa18.72■□□□□ 0.59
HLA-DQB1-201ENST00000374943 NDRG1Q92597 394 aaKnown RBP18.72■□□□□ 0.59
HLA-DQB1-201ENST00000374943 SERPINB12Q96P63 405 aa18.72■□□□□ 0.59
HLA-DQB1-201ENST00000374943 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.72■□□□□ 0.59
HLA-DQB1-201ENST00000374943 PNPLA8Q9NP80 782 aa18.72■□□□□ 0.59
HLA-DQB1-201ENST00000374943 SLC12A6Q9UHW9 1150 aa18.72■□□□□ 0.59
HLA-DQB1-201ENST00000374943 PCDHB8Q9UN66 801 aa18.72■□□□□ 0.59
HLA-DQB1-201ENST00000374943 USP3Q9Y6I4 520 aa18.72■□□□□ 0.59
HLA-DQB1-201ENST00000374943 CCDC85CA6NKD9 419 aa18.71■□□□□ 0.59
HLA-DQB1-201ENST00000374943 NRP1O14786 923 aa18.71■□□□□ 0.59
HLA-DQB1-201ENST00000374943 RGS16O15492 202 aaPredicted RBP18.71■□□□□ 0.59
HLA-DQB1-201ENST00000374943 SELPP16109 830 aa18.71■□□□□ 0.59
HLA-DQB1-201ENST00000374943 NR2C2P49116 596 aa18.71■□□□□ 0.59
HLA-DQB1-201ENST00000374943 ATP1A2P50993 1020 aa18.71■□□□□ 0.59
HLA-DQB1-201ENST00000374943 AIF1P55008 147 aa18.71■□□□□ 0.59
HLA-DQB1-201ENST00000374943 MAGOHP61326 146 aaKnown RBP18.71■□□□□ 0.59
HLA-DQB1-201ENST00000374943 GNGT1P63211 74 aa18.71■□□□□ 0.59
HLA-DQB1-201ENST00000374943 XRCC4Q13426 336 aa18.71■□□□□ 0.59
HLA-DQB1-201ENST00000374943 PAN2Q504Q3 1202 aaKnown RBP18.71■□□□□ 0.59
HLA-DQB1-201ENST00000374943 PPP6R3Q5H9R7 873 aaPredicted RBP18.71■□□□□ 0.59
HLA-DQB1-201ENST00000374943 OVOS1Q6IE37 1185 aa18.71■□□□□ 0.59
HLA-DQB1-201ENST00000374943 C1orf228Q6PIY5 440 aa18.71■□□□□ 0.59
HLA-DQB1-201ENST00000374943 LRRC8DQ7L1W4 858 aa18.71■□□□□ 0.59
HLA-DQB1-201ENST00000374943 GPRIN1Q7Z2K8 1008 aa18.71■□□□□ 0.59
HLA-DQB1-201ENST00000374943 THEM5Q8N1Q8 247 aa18.71■□□□□ 0.59
HLA-DQB1-201ENST00000374943 FAM71DQ8N9W8 422 aa18.71■□□□□ 0.59
HLA-DQB1-201ENST00000374943 URGCPQ8TCY9 931 aa18.71■□□□□ 0.59
HLA-DQB1-201ENST00000374943 EPS8L3Q8TE67 593 aaKnown RBP18.71■□□□□ 0.59
HLA-DQB1-201ENST00000374943 PGAP3Q96FM1 320 aaPredicted RBP18.71■□□□□ 0.59
HLA-DQB1-201ENST00000374943 CSPG4P5Q96PW8 444 aa18.71■□□□□ 0.59
HLA-DQB1-201ENST00000374943 KCNK16Q96T55 309 aa18.71■□□□□ 0.59
HLA-DQB1-201ENST00000374943 SLC9A7Q96T83 725 aa18.71■□□□□ 0.59
HLA-DQB1-201ENST00000374943 C10orf88Q9H8K7 445 aa18.71■□□□□ 0.59
HLA-DQB1-201ENST00000374943 USP29Q9HBJ7 922 aa18.71■□□□□ 0.59
HLA-DQB1-201ENST00000374943 DNAJC17Q9NVM6 304 aaKnown RBP18.71■□□□□ 0.59
HLA-DQB1-201ENST00000374943 RRN3Q9NYV6 651 aa18.71■□□□□ 0.59
HLA-DQB1-201ENST00000374943 KANSL3Q9P2N6 904 aa18.71■□□□□ 0.59
HLA-DQB1-201ENST00000374943 SRRM3A6NNA2 597 aaPredicted RBP18.7■□□□□ 0.58
HLA-DQB1-201ENST00000374943 H7C0C1 242 aa18.7■□□□□ 0.58
HLA-DQB1-201ENST00000374943 EIF3HO15372 352 aaKnown RBP eCLIP18.7■□□□□ 0.58
HLA-DQB1-201ENST00000374943 FYNP06241 537 aa18.7■□□□□ 0.58
HLA-DQB1-201ENST00000374943 IBSPP21815 317 aaPredicted RBP18.7■□□□□ 0.58
HLA-DQB1-201ENST00000374943 HPDP32754 393 aaPredicted RBP18.7■□□□□ 0.58
HLA-DQB1-201ENST00000374943 ATP5OP48047 213 aa18.7■□□□□ 0.58
HLA-DQB1-201ENST00000374943 AUHQ13825 339 aaKnown RBP18.7■□□□□ 0.58
HLA-DQB1-201ENST00000374943 NOMO2Q5JPE7 1267 aa18.7■□□□□ 0.58
HLA-DQB1-201ENST00000374943 HFE2Q6ZVN8 426 aa18.7■□□□□ 0.58
HLA-DQB1-201ENST00000374943 BHLHA9Q7RTU4 235 aa18.7■□□□□ 0.58
HLA-DQB1-201ENST00000374943 OR10T2Q8NGX3 314 aa18.7■□□□□ 0.58
HLA-DQB1-201ENST00000374943 UHMK1Q8TAS1 419 aaKnown RBP18.7■□□□□ 0.58
HLA-DQB1-201ENST00000374943 SAYSD1Q9NPB0 183 aa18.7■□□□□ 0.58
HLA-DQB1-201ENST00000374943 PLXNA3P51805 1871 aa18.7■□□□□ 0.58
HLA-DQB1-201ENST00000374943 DCDC2CA8MYV0 355 aa18.69■□□□□ 0.58
HLA-DQB1-201ENST00000374943 ALOX15BO15296 676 aa18.69■□□□□ 0.58
HLA-DQB1-201ENST00000374943 ZBED1O96006 694 aa18.69■□□□□ 0.58
HLA-DQB1-201ENST00000374943 ITGB1P05556 798 aa18.69■□□□□ 0.58
HLA-DQB1-201ENST00000374943 IVLP07476 585 aa18.69■□□□□ 0.58
HLA-DQB1-201ENST00000374943 MDH1P40925 334 aaKnown RBP18.69■□□□□ 0.58
HLA-DQB1-201ENST00000374943 CBLBQ13191 982 aa18.69■□□□□ 0.58
HLA-DQB1-201ENST00000374943 SYPL2Q5VXT5 272 aa18.69■□□□□ 0.58
HLA-DQB1-201ENST00000374943 PM20D1Q6GTS8 502 aa18.69■□□□□ 0.58
HLA-DQB1-201ENST00000374943 CENPUQ71F23 418 aa18.69■□□□□ 0.58
HLA-DQB1-201ENST00000374943 ZC3H18Q86VM9 953 aaKnown RBP18.69■□□□□ 0.58
HLA-DQB1-201ENST00000374943 FAM131BQ86XD5 332 aa18.69■□□□□ 0.58
HLA-DQB1-201ENST00000374943 COLGALT2Q8IYK4 626 aa18.69■□□□□ 0.58
HLA-DQB1-201ENST00000374943 HASPINQ8TF76 798 aa18.69■□□□□ 0.58
HLA-DQB1-201ENST00000374943 NTAN1Q96AB6 310 aa18.69■□□□□ 0.58
HLA-DQB1-201ENST00000374943 ELAC1Q9H777 363 aaKnown RBP18.69■□□□□ 0.58
HLA-DQB1-201ENST00000374943 CNOT10Q9H9A5 744 aaKnown RBP18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms