RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 GBA2Q9HCG7 927 aaPredicted RBP12.22□□□□□ -0.45
DEPDC1-201ENST00000370966 TAS2R14Q9NYV8 317 aa12.22□□□□□ -0.45
DEPDC1-201ENST00000370966 TRHDEQ9UKU6 1024 aa12.22□□□□□ -0.45
DEPDC1-201ENST00000370966 VANGL2Q9ULK5 521 aa12.22□□□□□ -0.45
DEPDC1-201ENST00000370966 H7C4K7 107 aa12.21□□□□□ -0.45
DEPDC1-201ENST00000370966 TRDMT1O14717 391 aaKnown RBP12.21□□□□□ -0.45
DEPDC1-201ENST00000370966 HOXA2O43364 376 aa12.21□□□□□ -0.45
DEPDC1-201ENST00000370966 GLRA2P23416 452 aa12.21□□□□□ -0.45
DEPDC1-201ENST00000370966 CDH8P55286 799 aa12.21□□□□□ -0.45
DEPDC1-201ENST00000370966 KPNB1Q14974 876 aaKnown RBP12.21□□□□□ -0.45
DEPDC1-201ENST00000370966 ZRANB3Q5FWF4 1079 aa12.21□□□□□ -0.45
DEPDC1-201ENST00000370966 CATSPERGQ6ZRH7 1159 aa12.21□□□□□ -0.45
DEPDC1-201ENST00000370966 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.21□□□□□ -0.45
DEPDC1-201ENST00000370966 APLFQ8IW19 511 aaPredicted RBP12.21□□□□□ -0.45
DEPDC1-201ENST00000370966 GPC2Q8N158 579 aa12.21□□□□□ -0.45
DEPDC1-201ENST00000370966 LZTR1Q8N653 840 aa12.21□□□□□ -0.45
DEPDC1-201ENST00000370966 WNK4Q96J92 1243 aa12.21□□□□□ -0.45
DEPDC1-201ENST00000370966 TAGLN3Q9UI15 199 aa12.21□□□□□ -0.45
DEPDC1-201ENST00000370966 TRMT6Q9UJA5 497 aaKnown RBP12.21□□□□□ -0.45
DEPDC1-201ENST00000370966 REXO2Q9Y3B8 237 aaKnown RBP12.21□□□□□ -0.45
DEPDC1-201ENST00000370966 PCDHB7Q9Y5E2 793 aa12.21□□□□□ -0.45
DEPDC1-201ENST00000370966 ACTL7BQ9Y614 415 aa12.21□□□□□ -0.45
DEPDC1-201ENST00000370966 SLC4A7Q9Y6M7 1214 aa12.21□□□□□ -0.45
DEPDC1-201ENST00000370966 UBR1Q8IWV7 1749 aa12.21□□□□□ -0.45
DEPDC1-201ENST00000370966 YY1P25490 414 aa12.21□□□□□ -0.45
DEPDC1-201ENST00000370966 CDK16Q00536 496 aa12.21□□□□□ -0.45
DEPDC1-201ENST00000370966 CDH17Q12864 832 aa12.21□□□□□ -0.45
DEPDC1-201ENST00000370966 C9orf131Q5VYM1 1079 aa12.21□□□□□ -0.45
DEPDC1-201ENST00000370966 GRAMD4Q6IC98 578 aa12.21□□□□□ -0.45
DEPDC1-201ENST00000370966 BLOC1S5Q8TDH9 187 aa12.21□□□□□ -0.45
DEPDC1-201ENST00000370966 TCP10LQ8TDR4 215 aa12.21□□□□□ -0.45
DEPDC1-201ENST00000370966 ANKRD27Q96NW4 1050 aa12.21□□□□□ -0.45
DEPDC1-201ENST00000370966 TMEM120AQ9BXJ8 343 aa12.21□□□□□ -0.45
DEPDC1-201ENST00000370966 CHST12Q9NRB3 414 aa12.21□□□□□ -0.45
DEPDC1-201ENST00000370966 IARS2Q9NSE4 1012 aaKnown RBP12.21□□□□□ -0.45
DEPDC1-201ENST00000370966 DDX43Q9NXZ2 648 aaKnown RBP12.21□□□□□ -0.45
DEPDC1-201ENST00000370966 RUVBL2Q9Y230 463 aaKnown RBP12.21□□□□□ -0.45
DEPDC1-201ENST00000370966 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.21□□□□□ -0.45
DEPDC1-201ENST00000370966 F8VP50 259 aa12.21□□□□□ -0.45
DEPDC1-201ENST00000370966 RBAK-RBAKDNI3L0D1 243 aa12.21□□□□□ -0.45
DEPDC1-201ENST00000370966 HNRNPRO43390 633 aaKnown RBP12.21□□□□□ -0.45
DEPDC1-201ENST00000370966 BGNP21810 368 aa12.21□□□□□ -0.45
DEPDC1-201ENST00000370966 RAB27AP51159 221 aa12.21□□□□□ -0.45
DEPDC1-201ENST00000370966 EVX2Q03828 476 aa12.21□□□□□ -0.45
DEPDC1-201ENST00000370966 UNC93AQ86WB7 457 aa12.21□□□□□ -0.45
DEPDC1-201ENST00000370966 MIB1Q86YT6 1006 aa12.21□□□□□ -0.45
DEPDC1-201ENST00000370966 APOPT1Q96IL0 206 aa12.21□□□□□ -0.45
DEPDC1-201ENST00000370966 RBBP8Q99708 897 aa12.21□□□□□ -0.45
DEPDC1-201ENST00000370966 SYTL2Q9HCH5 934 aa12.21□□□□□ -0.45
DEPDC1-201ENST00000370966 TNFSF13BQ9Y275 285 aa12.21□□□□□ -0.45
DEPDC1-201ENST00000370966 MON2Q7Z3U7 1717 aa12.21□□□□□ -0.45
DEPDC1-201ENST00000370966 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.21□□□□□ -0.45
DEPDC1-201ENST00000370966 VPS26AO75436 327 aa12.21□□□□□ -0.46
DEPDC1-201ENST00000370966 ZNF286BP0CG31 522 aa12.21□□□□□ -0.46
DEPDC1-201ENST00000370966 KDELR1P24390 212 aa12.21□□□□□ -0.46
DEPDC1-201ENST00000370966 CCR1P32246 355 aa12.21□□□□□ -0.46
DEPDC1-201ENST00000370966 ALDH7A1P49419 539 aaKnown RBP12.21□□□□□ -0.46
DEPDC1-201ENST00000370966 FMO1Q01740 532 aa12.21□□□□□ -0.46
DEPDC1-201ENST00000370966 MAMLD1Q13495 774 aa12.21□□□□□ -0.46
DEPDC1-201ENST00000370966 GTF2H3Q13889 308 aa12.21□□□□□ -0.46
DEPDC1-201ENST00000370966 SYTL3Q4VX76 610 aa12.21□□□□□ -0.46
DEPDC1-201ENST00000370966 ARSHQ5FYA8 562 aa12.21□□□□□ -0.46
DEPDC1-201ENST00000370966 C16orf87Q6PH81 154 aa12.21□□□□□ -0.46
DEPDC1-201ENST00000370966 CLEC4FQ8N1N0 589 aa12.21□□□□□ -0.46
DEPDC1-201ENST00000370966 PRELID2Q8N945 189 aa12.21□□□□□ -0.46
DEPDC1-201ENST00000370966 ZNF555Q8NEP9 628 aa12.21□□□□□ -0.46
DEPDC1-201ENST00000370966 VAT1Q99536 393 aa12.21□□□□□ -0.46
DEPDC1-201ENST00000370966 MTIF3Q9H2K0 278 aaKnown RBP12.21□□□□□ -0.46
DEPDC1-201ENST00000370966 USP20Q9Y2K6 914 aa12.21□□□□□ -0.46
DEPDC1-201ENST00000370966 FKBP6O75344 327 aa12.2□□□□□ -0.46
DEPDC1-201ENST00000370966 TCN1P20061 433 aaPredicted RBP12.2□□□□□ -0.46
DEPDC1-201ENST00000370966 PRKAA2P54646 552 aa12.2□□□□□ -0.46
DEPDC1-201ENST00000370966 MAP3K10Q02779 954 aa12.2□□□□□ -0.46
DEPDC1-201ENST00000370966 ELAVL2Q12926 359 aaKnown RBP12.2□□□□□ -0.46
DEPDC1-201ENST00000370966 PTK2BQ14289 1009 aa12.2□□□□□ -0.46
DEPDC1-201ENST00000370966 TRMT5Q32P41 509 aaKnown RBP12.2□□□□□ -0.46
DEPDC1-201ENST00000370966 PHF13Q86YI8 300 aaPredicted RBP12.2□□□□□ -0.46
DEPDC1-201ENST00000370966 VPS37AQ8NEZ2 397 aa12.2□□□□□ -0.46
DEPDC1-201ENST00000370966 TRAPPC12Q8WVT3 735 aa12.2□□□□□ -0.46
DEPDC1-201ENST00000370966 JADE3Q92613 823 aa12.2□□□□□ -0.46
DEPDC1-201ENST00000370966 TMEM169Q96HH4 297 aa12.2□□□□□ -0.46
DEPDC1-201ENST00000370966 L3MBTL3Q96JM7 780 aaPredicted RBP12.2□□□□□ -0.46
DEPDC1-201ENST00000370966 TBC1D13Q9NVG8 400 aa12.2□□□□□ -0.46
DEPDC1-201ENST00000370966 PDP2Q9P2J9 529 aa12.2□□□□□ -0.46
DEPDC1-201ENST00000370966 DGKIO75912 1065 aa12.2□□□□□ -0.46
DEPDC1-201ENST00000370966 UPP2O95045 317 aa12.2□□□□□ -0.46
DEPDC1-201ENST00000370966 EGFRP00533 1210 aa12.2□□□□□ -0.46
DEPDC1-201ENST00000370966 ATP5BP06576 529 aaKnown RBP12.2□□□□□ -0.46
DEPDC1-201ENST00000370966 NUDT17P0C025 328 aa12.2□□□□□ -0.46
DEPDC1-201ENST00000370966 MTA1Q13330 715 aa12.2□□□□□ -0.46
DEPDC1-201ENST00000370966 APOL2Q9BQE5 337 aa12.2□□□□□ -0.46
DEPDC1-201ENST00000370966 PRKD2Q9BZL6 878 aa12.2□□□□□ -0.46
DEPDC1-201ENST00000370966 IRAK4Q9NWZ3 460 aa12.2□□□□□ -0.46
DEPDC1-201ENST00000370966 CRLS1Q9UJA2 301 aa12.2□□□□□ -0.46
DEPDC1-201ENST00000370966 GGA2Q9UJY4 613 aa12.2□□□□□ -0.46
DEPDC1-201ENST00000370966 MROH7Q68CQ1 1323 aa12.2□□□□□ -0.46
DEPDC1-201ENST00000370966 SYF2O95926 243 aaKnown RBP12.2□□□□□ -0.46
DEPDC1-201ENST00000370966 SERPINE1P05121 402 aa12.2□□□□□ -0.46
DEPDC1-201ENST00000370966 NPY2RP49146 381 aa12.2□□□□□ -0.46
DEPDC1-201ENST00000370966 KPNA1P52294 538 aaPredicted RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms