RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 PDE6CP51160 858 aa15.39■□□□□ 0.05
SF3B5-201ENST00000367569 YWHAGP61981 247 aaKnown RBP eCLIP15.39■□□□□ 0.05
SF3B5-201ENST00000367569 EFEMP1Q12805 493 aa15.39■□□□□ 0.05
SF3B5-201ENST00000367569 SRSF5Q13243 272 aaKnown RBP15.39■□□□□ 0.05
SF3B5-201ENST00000367569 RUNX3Q13761 415 aa15.39■□□□□ 0.05
SF3B5-201ENST00000367569 EML3Q32P44 896 aa15.39■□□□□ 0.05
SF3B5-201ENST00000367569 RAB41Q5JT25 222 aa15.39■□□□□ 0.05
SF3B5-201ENST00000367569 HEATR6Q6AI08 1181 aaKnown RBP15.39■□□□□ 0.05
SF3B5-201ENST00000367569 PRR23BQ6ZRT6 265 aa15.39■□□□□ 0.05
SF3B5-201ENST00000367569 SLC47A2Q86VL8 602 aa15.39■□□□□ 0.05
SF3B5-201ENST00000367569 OSCP1Q8WVF1 389 aa15.39■□□□□ 0.05
SF3B5-201ENST00000367569 PCMTD1Q96MG8 357 aaPredicted RBP15.39■□□□□ 0.05
SF3B5-201ENST00000367569 GANQ9H2C0 597 aa15.39■□□□□ 0.05
SF3B5-201ENST00000367569 NLRC4Q9NPP4 1024 aa15.39■□□□□ 0.05
SF3B5-201ENST00000367569 ST7Q9NRC1 585 aa15.39■□□□□ 0.05
SF3B5-201ENST00000367569 COMMD8Q9NX08 183 aa15.39■□□□□ 0.05
SF3B5-201ENST00000367569 GMEB2Q9UKD1 530 aa15.39■□□□□ 0.05
SF3B5-201ENST00000367569 USP18Q9UMW8 372 aa15.39■□□□□ 0.05
SF3B5-201ENST00000367569 CNTN6Q9UQ52 1028 aa15.39■□□□□ 0.05
SF3B5-201ENST00000367569 SH3BP1Q9Y3L3 701 aa15.39■□□□□ 0.05
SF3B5-201ENST00000367569 USP3Q9Y6I4 520 aa15.39■□□□□ 0.05
SF3B5-201ENST00000367569 YJEFN3A6XGL0 299 aa15.38■□□□□ 0.05
SF3B5-201ENST00000367569 SOBPA7XYQ1 873 aa15.38■□□□□ 0.05
SF3B5-201ENST00000367569 E7ENQ6 273 aa15.38■□□□□ 0.05
SF3B5-201ENST00000367569 FOXN3O00409 490 aaPredicted RBP15.38■□□□□ 0.05
SF3B5-201ENST00000367569 ZBED1O96006 694 aa15.38■□□□□ 0.05
SF3B5-201ENST00000367569 CYP17A1P05093 508 aa15.38■□□□□ 0.05
SF3B5-201ENST00000367569 ZNF18P17022 549 aa15.38■□□□□ 0.05
SF3B5-201ENST00000367569 CDK11BP21127 795 aaKnown RBP15.38■□□□□ 0.05
SF3B5-201ENST00000367569 SIM2Q14190 667 aaPredicted RBP15.38■□□□□ 0.05
SF3B5-201ENST00000367569 DRAP1Q14919 205 aaPredicted RBP15.38■□□□□ 0.05
SF3B5-201ENST00000367569 SYCP1Q15431 976 aa15.38■□□□□ 0.05
SF3B5-201ENST00000367569 CNGA2Q16280 664 aa15.38■□□□□ 0.05
SF3B5-201ENST00000367569 KLHDC7AQ5VTJ3 777 aa15.38■□□□□ 0.05
SF3B5-201ENST00000367569 TAF3Q5VWG9 929 aa15.38■□□□□ 0.05
SF3B5-201ENST00000367569 SNX30Q5VWJ9 437 aa15.38■□□□□ 0.05
SF3B5-201ENST00000367569 RSRC2Q7L4I2 434 aaKnown RBP15.38■□□□□ 0.05
SF3B5-201ENST00000367569 ENOSF1Q7L5Y1 443 aa15.38■□□□□ 0.05
SF3B5-201ENST00000367569 BBS7Q8IWZ6 715 aa15.38■□□□□ 0.05
SF3B5-201ENST00000367569 SYNPOQ8N3V7 929 aa15.38■□□□□ 0.05
SF3B5-201ENST00000367569 CPA6Q8N4T0 437 aa15.38■□□□□ 0.05
SF3B5-201ENST00000367569 ECT2Q9H8V3 914 aa15.38■□□□□ 0.05
SF3B5-201ENST00000367569 CYLDQ9NQC7 956 aa15.38■□□□□ 0.05
SF3B5-201ENST00000367569 LIMA1Q9UHB6 759 aaKnown RBP15.38■□□□□ 0.05
SF3B5-201ENST00000367569 RAB23Q9ULC3 237 aa15.38■□□□□ 0.05
SF3B5-201ENST00000367569 LGALS16A8MUM7 142 aa15.37■□□□□ 0.05
SF3B5-201ENST00000367569 MSI1O43347 362 aaKnown RBP15.37■□□□□ 0.05
SF3B5-201ENST00000367569 TPM2P07951 284 aa15.37■□□□□ 0.05
SF3B5-201ENST00000367569 GJA4P35212 333 aa15.37■□□□□ 0.05
SF3B5-201ENST00000367569 ATP5C1P36542 298 aaKnown RBP15.37■□□□□ 0.05
SF3B5-201ENST00000367569 ZNF165P49910 485 aa15.37■□□□□ 0.05
SF3B5-201ENST00000367569 TUBP50607 506 aa15.37■□□□□ 0.05
SF3B5-201ENST00000367569 ATXN1P54253 815 aaKnown RBP15.37■□□□□ 0.05
SF3B5-201ENST00000367569 DAOAP59103 153 aa15.37■□□□□ 0.05
SF3B5-201ENST00000367569 SPEM2Q0P670 501 aa15.37■□□□□ 0.05
SF3B5-201ENST00000367569 PDGFRLQ15198 375 aa15.37■□□□□ 0.05
SF3B5-201ENST00000367569 ZSCAN23Q3MJ62 389 aa15.37■□□□□ 0.05
SF3B5-201ENST00000367569 FKBP15Q5T1M5 1219 aa15.37■□□□□ 0.05
SF3B5-201ENST00000367569 LAIR1Q6GTX8 287 aa15.37■□□□□ 0.05
SF3B5-201ENST00000367569 FSTL4Q6MZW2 842 aa15.37■□□□□ 0.05
SF3B5-201ENST00000367569 PKN3Q6P5Z2 889 aa15.37■□□□□ 0.05
SF3B5-201ENST00000367569 APTXQ7Z2E3 356 aaKnown RBP15.37■□□□□ 0.05
SF3B5-201ENST00000367569 LONP2Q86WA8 852 aa15.37■□□□□ 0.05
SF3B5-201ENST00000367569 C1orf131Q8NDD1 294 aaKnown RBP15.37■□□□□ 0.05
SF3B5-201ENST00000367569 SLC35F5Q8WV83 523 aa15.37■□□□□ 0.05
SF3B5-201ENST00000367569 ZNF606Q8WXB4 792 aa15.37■□□□□ 0.05
SF3B5-201ENST00000367569 ATP2A3Q93084 1043 aa15.37■□□□□ 0.05
SF3B5-201ENST00000367569 PIWIL1Q96J94 861 aaKnown RBP15.37■□□□□ 0.05
SF3B5-201ENST00000367569 KLF16Q9BXK1 252 aaPredicted RBP15.37■□□□□ 0.05
SF3B5-201ENST00000367569 NAT10Q9H0A0 1025 aaKnown RBP15.37■□□□□ 0.05
SF3B5-201ENST00000367569 FBRSL1Q9HCM7 1045 aaKnown RBP15.37■□□□□ 0.05
SF3B5-201ENST00000367569 KIAA1257Q9ULG3 409 aa15.37■□□□□ 0.05
SF3B5-201ENST00000367569 RALGAPA1Q6GYQ0 2036 aa15.36■□□□□ 0.05
SF3B5-201ENST00000367569 ANTXRLA6NF34 631 aa15.36■□□□□ 0.05
SF3B5-201ENST00000367569 PRR5-ARHGAP8B1AHC4 643 aa15.36■□□□□ 0.05
SF3B5-201ENST00000367569 E5RJQ4 531 aa15.36■□□□□ 0.05
SF3B5-201ENST00000367569 F8VZ95 297 aa15.36■□□□□ 0.05
SF3B5-201ENST00000367569 RETP07949 1114 aa15.36■□□□□ 0.05
SF3B5-201ENST00000367569 RALAP11233 206 aa15.36■□□□□ 0.05
SF3B5-201ENST00000367569 UCHL3P15374 230 aa15.36■□□□□ 0.05
SF3B5-201ENST00000367569 PFKLP17858 780 aa15.36■□□□□ 0.05
SF3B5-201ENST00000367569 CLCN1P35523 988 aa15.36■□□□□ 0.05
SF3B5-201ENST00000367569 POLR2FP61218 127 aaKnown RBP15.36■□□□□ 0.05
SF3B5-201ENST00000367569 ARHGAP8P85298 464 aa15.36■□□□□ 0.05
SF3B5-201ENST00000367569 LMNB2Q03252 620 aa15.36■□□□□ 0.05
SF3B5-201ENST00000367569 UBXN1Q04323 297 aa15.36■□□□□ 0.05
SF3B5-201ENST00000367569 KDSRQ06136 332 aa15.36■□□□□ 0.05
SF3B5-201ENST00000367569 STILQ15468 1287 aa15.36■□□□□ 0.05
SF3B5-201ENST00000367569 TMEM196Q5HYL7 178 aa15.36■□□□□ 0.05
SF3B5-201ENST00000367569 BTBD8Q5XKL5 378 aa15.36■□□□□ 0.05
SF3B5-201ENST00000367569 LUZP1Q86V48 1076 aa15.36■□□□□ 0.05
SF3B5-201ENST00000367569 C12orf40Q86WS4 652 aa15.36■□□□□ 0.05
SF3B5-201ENST00000367569 ANKRD20A12PQ8NF67 263 aa15.36■□□□□ 0.05
SF3B5-201ENST00000367569 BHMTQ93088 406 aa15.36■□□□□ 0.05
SF3B5-201ENST00000367569 NAA15Q9BXJ9 866 aaKnown RBP15.36■□□□□ 0.05
SF3B5-201ENST00000367569 CBX8Q9HC52 389 aa15.36■□□□□ 0.05
SF3B5-201ENST00000367569 SIK3Q9Y2K2 1263 aa15.36■□□□□ 0.05
SF3B5-201ENST00000367569 SLC12A8A0AV02 714 aa15.35■□□□□ 0.05
SF3B5-201ENST00000367569 TRDMT1O14717 391 aaKnown RBP15.35■□□□□ 0.05
SF3B5-201ENST00000367569 TEX33O43247 280 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms