RNA–Protein interactions for RNA: ENST00000366735.5

MRPL55-209, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL55, Length 1,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-209ENST00000366735 GIPC1O14908 333 aa13.09□□□□□ -0.31
MRPL55-209ENST00000366735 KIF20AO95235 890 aa13.09□□□□□ -0.31
MRPL55-209ENST00000366735 RPN1P04843 607 aaKnown RBP13.09□□□□□ -0.31
MRPL55-209ENST00000366735 ENGP17813 658 aa13.09□□□□□ -0.31
MRPL55-209ENST00000366735 NTSR1P30989 418 aa13.09□□□□□ -0.31
MRPL55-209ENST00000366735 MAPK8P45983 427 aa13.09□□□□□ -0.31
MRPL55-209ENST00000366735 GFPT1Q06210 699 aaPredicted RBP13.09□□□□□ -0.31
MRPL55-209ENST00000366735 E2F5Q15329 346 aa13.09□□□□□ -0.31
MRPL55-209ENST00000366735 STX1AQ16623 288 aa13.09□□□□□ -0.31
MRPL55-209ENST00000366735 SGSM1Q2NKQ1 1148 aa13.09□□□□□ -0.31
MRPL55-209ENST00000366735 PEAR1Q5VY43 1037 aaPredicted RBP13.09□□□□□ -0.31
MRPL55-209ENST00000366735 UNC93AQ86WB7 457 aa13.09□□□□□ -0.31
MRPL55-209ENST00000366735 BBS7Q8IWZ6 715 aa13.09□□□□□ -0.31
MRPL55-209ENST00000366735 NAT16Q8N8M0 369 aa13.09□□□□□ -0.31
MRPL55-209ENST00000366735 SCAMP5Q8TAC9 235 aa13.09□□□□□ -0.31
MRPL55-209ENST00000366735 PARD3BQ8TEW8 1205 aa13.09□□□□□ -0.31
MRPL55-209ENST00000366735 ZFRQ96KR1 1074 aaKnown RBP13.09□□□□□ -0.31
MRPL55-209ENST00000366735 KCNK16Q96T55 309 aa13.09□□□□□ -0.31
MRPL55-209ENST00000366735 CCSER2Q9H7U1 834 aa13.09□□□□□ -0.31
MRPL55-209ENST00000366735 DNAJC17Q9NVM6 304 aaKnown RBP13.09□□□□□ -0.31
MRPL55-209ENST00000366735 ANO10Q9NW15 660 aa13.09□□□□□ -0.31
MRPL55-209ENST00000366735 IL37Q9NZH6 218 aa13.09□□□□□ -0.31
MRPL55-209ENST00000366735 WDR35Q9P2L0 1181 aa13.09□□□□□ -0.31
MRPL55-209ENST00000366735 CHORDC1Q9UHD1 332 aaPredicted RBP13.09□□□□□ -0.31
MRPL55-209ENST00000366735 SERTAD1Q9UHV2 236 aa13.09□□□□□ -0.31
MRPL55-209ENST00000366735 SLC6A14Q9UN76 642 aa13.09□□□□□ -0.31
MRPL55-209ENST00000366735 ATXN2Q99700 1313 aaKnown RBP13.09□□□□□ -0.31
MRPL55-209ENST00000366735 CKAP5Q14008 2032 aa13.08□□□□□ -0.31
MRPL55-209ENST00000366735 LRRIQ3A6PVS8 624 aaPredicted RBP13.08□□□□□ -0.32
MRPL55-209ENST00000366735 NEDD8-MDP1E9PL57 170 aa13.08□□□□□ -0.32
MRPL55-209ENST00000366735 H0Y626 953 aa13.08□□□□□ -0.32
MRPL55-209ENST00000366735 ADAM23O75077 832 aa13.08□□□□□ -0.32
MRPL55-209ENST00000366735 TRIM16O95361 564 aa13.08□□□□□ -0.32
MRPL55-209ENST00000366735 SYPP08247 313 aa13.08□□□□□ -0.32
MRPL55-209ENST00000366735 ZDHHC11BP0C7U3 371 aa13.08□□□□□ -0.32
MRPL55-209ENST00000366735 FAM200BP0CF97 657 aa13.08□□□□□ -0.32
MRPL55-209ENST00000366735 HNRNPLP14866 589 aaKnown RBP eCLIP13.08□□□□□ -0.32
MRPL55-209ENST00000366735 ATP5C1P36542 298 aaKnown RBP13.08□□□□□ -0.32
MRPL55-209ENST00000366735 PIK3CAP42336 1068 aa13.08□□□□□ -0.32
MRPL55-209ENST00000366735 PTGER3P43115 390 aa13.08□□□□□ -0.32
MRPL55-209ENST00000366735 CDH8P55286 799 aa13.08□□□□□ -0.32
MRPL55-209ENST00000366735 CLDN10P78369 228 aa13.08□□□□□ -0.32
MRPL55-209ENST00000366735 HNRNPDQ14103 355 aaKnown RBP13.08□□□□□ -0.32
MRPL55-209ENST00000366735 MAP7D1Q3KQU3 841 aa13.08□□□□□ -0.32
MRPL55-209ENST00000366735 ACOT1Q86TX2 421 aa13.08□□□□□ -0.32
MRPL55-209ENST00000366735 CHPFQ8IZ52 775 aa13.08□□□□□ -0.32
MRPL55-209ENST00000366735 PHTF2Q8N3S3 785 aa13.08□□□□□ -0.32
MRPL55-209ENST00000366735 PIP4P2Q8N4L2 257 aa13.08□□□□□ -0.32
MRPL55-209ENST00000366735 DEFB124Q8NES8 71 aa13.08□□□□□ -0.32
MRPL55-209ENST00000366735 SPATA20Q8TB22 786 aa13.08□□□□□ -0.32
MRPL55-209ENST00000366735 ZNF516Q92618 1163 aa13.08□□□□□ -0.32
MRPL55-209ENST00000366735 CDK5RAP1Q96SZ6 601 aaKnown RBP13.08□□□□□ -0.32
MRPL55-209ENST00000366735 BBS2Q9BXC9 721 aa13.08□□□□□ -0.32
MRPL55-209ENST00000366735 BLZF1Q9H2G9 400 aa13.08□□□□□ -0.32
MRPL55-209ENST00000366735 PNPLA8Q9NP80 782 aa13.08□□□□□ -0.32
MRPL55-209ENST00000366735 NPDC1Q9NQX5 325 aaPredicted RBP13.08□□□□□ -0.32
MRPL55-209ENST00000366735 CALCOCO1Q9P1Z2 691 aa13.08□□□□□ -0.32
MRPL55-209ENST00000366735 SUSD2Q9UGT4 822 aa13.08□□□□□ -0.32
MRPL55-209ENST00000366735 PILRBQ9UKJ0 227 aa13.08□□□□□ -0.32
MRPL55-209ENST00000366735 FRMD4BQ9Y2L6 1034 aa13.08□□□□□ -0.32
MRPL55-209ENST00000366735 STARD13Q9Y3M8 1113 aa13.08□□□□□ -0.32
MRPL55-209ENST00000366735 PCDHA5Q9Y5H7 936 aa13.08□□□□□ -0.32
MRPL55-209ENST00000366735 TP53BP1Q12888 1972 aaPredicted RBP13.08□□□□□ -0.32
MRPL55-209ENST00000366735 GON4LQ3T8J9 2241 aa13.08□□□□□ -0.32
MRPL55-209ENST00000366735 UPK3BL1B0FP48 263 aa13.07□□□□□ -0.32
MRPL55-209ENST00000366735 UPK3BL2E5RIL1 263 aa13.07□□□□□ -0.32
MRPL55-209ENST00000366735 CACNG3O60359 315 aa13.07□□□□□ -0.32
MRPL55-209ENST00000366735 OPHN1O60890 802 aa13.07□□□□□ -0.32
MRPL55-209ENST00000366735 NDUFS2O75306 463 aa13.07□□□□□ -0.32
MRPL55-209ENST00000366735 MYL1P05976 194 aa13.07□□□□□ -0.32
MRPL55-209ENST00000366735 SERPINF2P08697 491 aa13.07□□□□□ -0.32
MRPL55-209ENST00000366735 GABRG2P18507 467 aa13.07□□□□□ -0.32
MRPL55-209ENST00000366735 AFMP43652 599 aa13.07□□□□□ -0.32
MRPL55-209ENST00000366735 CASP4P49662 377 aa13.07□□□□□ -0.32
MRPL55-209ENST00000366735 MAP3K7CLP57077 242 aa13.07□□□□□ -0.32
MRPL55-209ENST00000366735 SYCP2LQ5T4T6 812 aa13.07□□□□□ -0.32
MRPL55-209ENST00000366735 EMC10Q5UCC4 262 aa13.07□□□□□ -0.32
MRPL55-209ENST00000366735 HTR3DQ70Z44 454 aa13.07□□□□□ -0.32
MRPL55-209ENST00000366735 SLC9A9Q8IVB4 645 aa13.07□□□□□ -0.32
MRPL55-209ENST00000366735 SFTPA1Q8IWL2 248 aa13.07□□□□□ -0.32
MRPL55-209ENST00000366735 FUKQ8N0W3 1084 aa13.07□□□□□ -0.32
MRPL55-209ENST00000366735 PDCD7Q8N8D1 485 aaKnown RBP13.07□□□□□ -0.32
MRPL55-209ENST00000366735 CCDC150Q8NCX0 1101 aa13.07□□□□□ -0.32
MRPL55-209ENST00000366735 SLC2A14Q8TDB8 520 aa13.07□□□□□ -0.32
MRPL55-209ENST00000366735 TMEM174Q8WUU8 243 aa13.07□□□□□ -0.32
MRPL55-209ENST00000366735 CCDC47Q96A33 483 aaKnown RBP13.07□□□□□ -0.32
MRPL55-209ENST00000366735 PAGE5Q96GU1 130 aa13.07□□□□□ -0.32
MRPL55-209ENST00000366735 GTPBP2Q9BX10 602 aaKnown RBP13.07□□□□□ -0.32
MRPL55-209ENST00000366735 CSNK1G1Q9HCP0 422 aa13.07□□□□□ -0.32
MRPL55-209ENST00000366735 ZDHHC4Q9NPG8 344 aa13.07□□□□□ -0.32
MRPL55-209ENST00000366735 CYLDQ9NQC7 956 aa13.07□□□□□ -0.32
MRPL55-209ENST00000366735 MARK1Q9P0L2 795 aa13.07□□□□□ -0.32
MRPL55-209ENST00000366735 MBD1Q9UIS9 605 aaPredicted RBP13.07□□□□□ -0.32
MRPL55-209ENST00000366735 ZMIZ1Q9ULJ6 1067 aa13.07□□□□□ -0.32
MRPL55-209ENST00000366735 CACNA1EQ15878 2313 aa13.06□□□□□ -0.32
MRPL55-209ENST00000366735 C1QTNF9BB2RNN3 333 aa13.06□□□□□ -0.32
MRPL55-209ENST00000366735 GFRA2O00451 464 aa13.06□□□□□ -0.32
MRPL55-209ENST00000366735 NPC1O15118 1278 aa13.06□□□□□ -0.32
MRPL55-209ENST00000366735 CALUO43852 315 aaPredicted RBP13.06□□□□□ -0.32
MRPL55-209ENST00000366735 SMC2O95347 1197 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms