RNA–Protein interactions for RNA: ENST00000364738.1

RNU4-42P-201, Transcript of RNA, U4 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU4-42P, Length 142 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-42P-201ENST00000364738 SLC25A28Q96A46 364 aa2.86□□□□□ -1.95
RNU4-42P-201ENST00000364738 TRMT61AQ96FX7 289 aaKnown RBP2.86□□□□□ -1.95
RNU4-42P-201ENST00000364738 KAZALD1Q96I82 304 aa2.86□□□□□ -1.95
RNU4-42P-201ENST00000364738 HIST1H2AAQ96QV6 131 aa2.86□□□□□ -1.95
RNU4-42P-201ENST00000364738 FCRL5Q96RD9 977 aa2.86□□□□□ -1.95
RNU4-42P-201ENST00000364738 CTAGE1Q96RT6 745 aa2.86□□□□□ -1.95
RNU4-42P-201ENST00000364738 CINPQ9BW66 212 aaPredicted RBP2.86□□□□□ -1.95
RNU4-42P-201ENST00000364738 TM2D2Q9BX73 214 aa2.86□□□□□ -1.95
RNU4-42P-201ENST00000364738 RTFDC1Q9BY42 306 aaPredicted RBP2.86□□□□□ -1.95
RNU4-42P-201ENST00000364738 C22orf23Q9BZE7 217 aa2.86□□□□□ -1.95
RNU4-42P-201ENST00000364738 NUAK2Q9H093 628 aa2.86□□□□□ -1.95
RNU4-42P-201ENST00000364738 DHX36Q9H2U1 1008 aaKnown RBP2.86□□□□□ -1.95
RNU4-42P-201ENST00000364738 MLXIPQ9HAP2 919 aa2.86□□□□□ -1.95
RNU4-42P-201ENST00000364738 CPNE7Q9UBL6 633 aa2.86□□□□□ -1.95
RNU4-42P-201ENST00000364738 AFF4Q9UHB7 1163 aaKnown RBP2.86□□□□□ -1.95
RNU4-42P-201ENST00000364738 SIRT4Q9Y6E7 314 aaPredicted RBP2.86□□□□□ -1.95
RNU4-42P-201ENST00000364738 FER1L4A9Z1Z3 1794 aa2.86□□□□□ -1.95
RNU4-42P-201ENST00000364738 USP19O94966 1318 aa2.86□□□□□ -1.95
RNU4-42P-201ENST00000364738 CFAP69A5D8W1 941 aa2.85□□□□□ -1.95
RNU4-42P-201ENST00000364738 PRSS44E7EML9 344 aa2.85□□□□□ -1.95
RNU4-42P-201ENST00000364738 FAM227AF5H4B4 570 aa2.85□□□□□ -1.95
RNU4-42P-201ENST00000364738 FOXN3O00409 490 aaPredicted RBP2.85□□□□□ -1.95
RNU4-42P-201ENST00000364738 RRHO14718 337 aa2.85□□□□□ -1.95
RNU4-42P-201ENST00000364738 CA12O43570 354 aa2.85□□□□□ -1.95
RNU4-42P-201ENST00000364738 AKAP10O43572 662 aa2.85□□□□□ -1.95
RNU4-42P-201ENST00000364738 TGFB3P10600 412 aa2.85□□□□□ -1.95
RNU4-42P-201ENST00000364738 ZKSCAN1P17029 563 aaPredicted RBP2.85□□□□□ -1.95
RNU4-42P-201ENST00000364738 TPH1P17752 444 aa2.85□□□□□ -1.95
RNU4-42P-201ENST00000364738 IBSPP21815 317 aaPredicted RBP2.85□□□□□ -1.95
RNU4-42P-201ENST00000364738 CDC25AP30304 524 aa2.85□□□□□ -1.95
RNU4-42P-201ENST00000364738 IL6STP40189 918 aaPredicted RBP2.85□□□□□ -1.95
RNU4-42P-201ENST00000364738 WDR5P61964 334 aaKnown RBP2.85□□□□□ -1.95
RNU4-42P-201ENST00000364738 RPS16P62249 146 aaKnown RBP2.85□□□□□ -1.95
RNU4-42P-201ENST00000364738 RHDQ02161 417 aa2.85□□□□□ -1.95
RNU4-42P-201ENST00000364738 MCL1Q07820 350 aa2.85□□□□□ -1.95
RNU4-42P-201ENST00000364738 CCDC15Q0P6D6 951 aa2.85□□□□□ -1.95
RNU4-42P-201ENST00000364738 PRTGQ2VWP7 1150 aa2.85□□□□□ -1.95
RNU4-42P-201ENST00000364738 C3orf38Q5JPI3 329 aa2.85□□□□□ -1.95
RNU4-42P-201ENST00000364738 MANEAQ5SRI9 462 aa2.85□□□□□ -1.95
RNU4-42P-201ENST00000364738 APOA5Q6Q788 366 aa2.85□□□□□ -1.95
RNU4-42P-201ENST00000364738 P3H2Q8IVL5 708 aa2.85□□□□□ -1.95
RNU4-42P-201ENST00000364738 YAF2Q8IY57 180 aa2.85□□□□□ -1.95
RNU4-42P-201ENST00000364738 RBMXL3Q8N7X1 1067 aaKnown RBP2.85□□□□□ -1.95
RNU4-42P-201ENST00000364738 PIGKQ92643 395 aa2.85□□□□□ -1.95
RNU4-42P-201ENST00000364738 NMD3Q96D46 503 aaKnown RBP2.85□□□□□ -1.95
RNU4-42P-201ENST00000364738 ZPBPQ9BS86 351 aa2.85□□□□□ -1.95
RNU4-42P-201ENST00000364738 BRINP2Q9C0B6 783 aa2.85□□□□□ -1.95
RNU4-42P-201ENST00000364738 TMEM60Q9H2L4 133 aa2.85□□□□□ -1.95
RNU4-42P-201ENST00000364738 FAM83DQ9H4H8 585 aa2.85□□□□□ -1.95
RNU4-42P-201ENST00000364738 TMEM8AQ9HCN3 771 aa2.85□□□□□ -1.95
RNU4-42P-201ENST00000364738 DNAJB11Q9UBS4 358 aa2.85□□□□□ -1.95
RNU4-42P-201ENST00000364738 MID2Q9UJV3 735 aa2.85□□□□□ -1.95
RNU4-42P-201ENST00000364738 SLC27A6Q9Y2P4 619 aa2.85□□□□□ -1.95
RNU4-42P-201ENST00000364738 TTC3P53804 2025 aa2.85□□□□□ -1.95
RNU4-42P-201ENST00000364738 SLC22A23A1A5C7 686 aa2.84□□□□□ -1.95
RNU4-42P-201ENST00000364738 ISM1B1AKI9 464 aa2.84□□□□□ -1.95
RNU4-42P-201ENST00000364738 F8W810 466 aa2.84□□□□□ -1.95
RNU4-42P-201ENST00000364738 CTIFO43310 598 aaKnown RBP2.84□□□□□ -1.95
RNU4-42P-201ENST00000364738 FRS3O43559 492 aa2.84□□□□□ -1.95
RNU4-42P-201ENST00000364738 CTNND1O60716 968 aaKnown RBP2.84□□□□□ -1.95
RNU4-42P-201ENST00000364738 IGSF3O75054 1194 aa2.84□□□□□ -1.95
RNU4-42P-201ENST00000364738 USP12O75317 370 aa2.84□□□□□ -1.95
RNU4-42P-201ENST00000364738 INMTO95050 263 aa2.84□□□□□ -1.95
RNU4-42P-201ENST00000364738 TMEM225BP0DP42 221 aa2.84□□□□□ -1.95
RNU4-42P-201ENST00000364738 TXNP10599 105 aaKnown RBP2.84□□□□□ -1.95
RNU4-42P-201ENST00000364738 IL1R1P14778 569 aa2.84□□□□□ -1.95
RNU4-42P-201ENST00000364738 YY1P25490 414 aa2.84□□□□□ -1.95
RNU4-42P-201ENST00000364738 GALNSP34059 522 aa2.84□□□□□ -1.95
RNU4-42P-201ENST00000364738 RAB27AP51159 221 aa2.84□□□□□ -1.95
RNU4-42P-201ENST00000364738 SLC12A2P55011 1212 aa2.84□□□□□ -1.95
RNU4-42P-201ENST00000364738 RAE1P78406 368 aaKnown RBP2.84□□□□□ -1.95
RNU4-42P-201ENST00000364738 KCNAB1Q14722 419 aa2.84□□□□□ -1.95
RNU4-42P-201ENST00000364738 CLCA4Q14CN2 919 aa2.84□□□□□ -1.95
RNU4-42P-201ENST00000364738 CNN3Q15417 329 aaKnown RBP2.84□□□□□ -1.95
RNU4-42P-201ENST00000364738 C18orf65Q6ZTR6 163 aa2.84□□□□□ -1.95
RNU4-42P-201ENST00000364738 RFX8Q6ZV50 586 aa2.84□□□□□ -1.95
RNU4-42P-201ENST00000364738 FAM57BQ71RH2 274 aa2.84□□□□□ -1.95
RNU4-42P-201ENST00000364738 B4GALNT4Q76KP1 1039 aa2.84□□□□□ -1.95
RNU4-42P-201ENST00000364738 TFAP2DQ7Z6R9 452 aa2.84□□□□□ -1.95
RNU4-42P-201ENST00000364738 KIAA0319LQ8IZA0 1049 aa2.84□□□□□ -1.95
RNU4-42P-201ENST00000364738 FSTL5Q8N475 847 aaPredicted RBP2.84□□□□□ -1.95
RNU4-42P-201ENST00000364738 DDX51Q8N8A6 666 aaKnown RBP eCLIP2.84□□□□□ -1.95
RNU4-42P-201ENST00000364738 ASB5Q8WWX0 329 aa2.84□□□□□ -1.95
RNU4-42P-201ENST00000364738 ZCWPW1Q9H0M4 648 aa2.84□□□□□ -1.95
RNU4-42P-201ENST00000364738 CDH19Q9H159 772 aa2.84□□□□□ -1.95
RNU4-42P-201ENST00000364738 DECR2Q9NUI1 292 aa2.84□□□□□ -1.95
RNU4-42P-201ENST00000364738 TYW1Q9NV66 732 aaKnown RBP2.84□□□□□ -1.95
RNU4-42P-201ENST00000364738 DDX56Q9NY93 547 aaKnown RBP2.84□□□□□ -1.95
RNU4-42P-201ENST00000364738 MSRB1Q9NZV6 116 aa2.84□□□□□ -1.95
RNU4-42P-201ENST00000364738 ITGB1BP2Q9UKP3 347 aa2.84□□□□□ -1.95
RNU4-42P-201ENST00000364738 TPCN1Q9ULQ1 816 aa2.84□□□□□ -1.95
RNU4-42P-201ENST00000364738 COG5Q9UP83 839 aa2.84□□□□□ -1.95
RNU4-42P-201ENST00000364738 NOP58Q9Y2X3 529 aaKnown RBP2.84□□□□□ -1.95
RNU4-42P-201ENST00000364738 C4orf47A7E2U8 309 aa2.83□□□□□ -1.96
RNU4-42P-201ENST00000364738 NDUFB8O95169 186 aa2.83□□□□□ -1.96
RNU4-42P-201ENST00000364738 EPN2O95208 641 aa2.83□□□□□ -1.96
RNU4-42P-201ENST00000364738 FGF2P09038 288 aa2.83□□□□□ -1.96
RNU4-42P-201ENST00000364738 TMIGD3P0DMS9 266 aaPredicted RBP2.83□□□□□ -1.96
RNU4-42P-201ENST00000364738 ST6GAL1P15907 406 aa2.83□□□□□ -1.96
RNU4-42P-201ENST00000364738 RPS6KB1P23443 525 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms