RNA–Protein interactions for RNA: ENST00000358694.10

CTNND1-201, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-201ENST00000358694 PLD1Q13393 1074 aa9.13□□□□□ -0.95
CTNND1-201ENST00000358694 TSNQ15631 228 aaKnown RBP9.13□□□□□ -0.95
CTNND1-201ENST00000358694 TRAPPC11Q7Z392 1133 aa9.13□□□□□ -0.95
CTNND1-201ENST00000358694 SLC13A5Q86YT5 568 aaPredicted RBP9.13□□□□□ -0.95
CTNND1-201ENST00000358694 BRSK2Q8IWQ3 736 aa9.13□□□□□ -0.95
CTNND1-201ENST00000358694 C1QTNF7Q9BXJ2 289 aa9.13□□□□□ -0.95
CTNND1-201ENST00000358694 RAD21L1Q9H4I0 556 aa9.13□□□□□ -0.95
CTNND1-201ENST00000358694 RHBDL2Q9NX52 303 aa9.13□□□□□ -0.95
CTNND1-201ENST00000358694 AXIN2Q9Y2T1 843 aa9.13□□□□□ -0.95
CTNND1-201ENST00000358694 PHF20L1A8MW92 1017 aa9.13□□□□□ -0.95
CTNND1-201ENST00000358694 MYL12BO14950 172 aa9.13□□□□□ -0.95
CTNND1-201ENST00000358694 BAIAP3O94812 1187 aa9.13□□□□□ -0.95
CTNND1-201ENST00000358694 TSPAN19P0C672 248 aa9.13□□□□□ -0.95
CTNND1-201ENST00000358694 MDH1P40925 334 aaKnown RBP9.13□□□□□ -0.95
CTNND1-201ENST00000358694 ITGA8P53708 1063 aa9.13□□□□□ -0.95
CTNND1-201ENST00000358694 SP8Q8IXZ3 490 aa9.13□□□□□ -0.95
CTNND1-201ENST00000358694 FIG4Q92562 907 aa9.13□□□□□ -0.95
CTNND1-201ENST00000358694 CELF1Q92879 486 aaKnown RBP9.13□□□□□ -0.95
CTNND1-201ENST00000358694 LRRC4BQ9NT99 713 aa9.13□□□□□ -0.95
CTNND1-201ENST00000358694 ENTPD4Q9Y227 616 aa9.13□□□□□ -0.95
CTNND1-201ENST00000358694 CYB561D2O14569 222 aa9.12□□□□□ -0.95
CTNND1-201ENST00000358694 ADCY6O43306 1168 aa9.12□□□□□ -0.95
CTNND1-201ENST00000358694 ATMINO43313 823 aaPredicted RBP9.12□□□□□ -0.95
CTNND1-201ENST00000358694 LARGE1O95461 756 aa9.12□□□□□ -0.95
CTNND1-201ENST00000358694 HSD3B2P26439 372 aa9.12□□□□□ -0.95
CTNND1-201ENST00000358694 RCVRNP35243 200 aa9.12□□□□□ -0.95
CTNND1-201ENST00000358694 PEX5P50542 639 aa9.12□□□□□ -0.95
CTNND1-201ENST00000358694 BOP1Q14137 746 aaKnown RBP9.12□□□□□ -0.95
CTNND1-201ENST00000358694 SPIDRQ14159 915 aa9.12□□□□□ -0.95
CTNND1-201ENST00000358694 C2CD6Q53TS8 623 aa9.12□□□□□ -0.95
CTNND1-201ENST00000358694 FAM171BQ6P995 826 aa9.12□□□□□ -0.95
CTNND1-201ENST00000358694 FAM220AQ7Z4H9 259 aa9.12□□□□□ -0.95
CTNND1-201ENST00000358694 ARID3BQ8IVW6 561 aaPredicted RBP9.12□□□□□ -0.95
CTNND1-201ENST00000358694 CCDC33Q8N5R6 958 aa9.12□□□□□ -0.95
CTNND1-201ENST00000358694 GMCL1Q96IK5 515 aa9.12□□□□□ -0.95
CTNND1-201ENST00000358694 ARHGAP28Q9P2N2 729 aa9.12□□□□□ -0.95
CTNND1-201ENST00000358694 FLT1P17948 1338 aa9.12□□□□□ -0.95
CTNND1-201ENST00000358694 THRAP10827 490 aa9.12□□□□□ -0.95
CTNND1-201ENST00000358694 TCF7P36402 384 aaPredicted RBP9.12□□□□□ -0.95
CTNND1-201ENST00000358694 NR6A1Q15406 480 aa9.12□□□□□ -0.95
CTNND1-201ENST00000358694 ERMARDQ5T6L9 678 aa9.12□□□□□ -0.95
CTNND1-201ENST00000358694 ENKURQ8TC29 256 aa9.12□□□□□ -0.95
CTNND1-201ENST00000358694 UBASH3BQ8TF42 649 aa9.12□□□□□ -0.95
CTNND1-201ENST00000358694 C6orf62Q9GZU0 229 aaPredicted RBP9.12□□□□□ -0.95
CTNND1-201ENST00000358694 EFCAB1Q9HAE3 211 aa9.12□□□□□ -0.95
CTNND1-201ENST00000358694 NT5MQ9NPB1 228 aa9.12□□□□□ -0.95
CTNND1-201ENST00000358694 TRIM10Q9UDY6 481 aa9.12□□□□□ -0.95
CTNND1-201ENST00000358694 DNAJC5BQ9UF47 199 aa9.12□□□□□ -0.95
CTNND1-201ENST00000358694 GPN3Q9UHW5 284 aaPredicted RBP9.12□□□□□ -0.95
CTNND1-201ENST00000358694 USP18Q9UMW8 372 aa9.12□□□□□ -0.95
CTNND1-201ENST00000358694 ABCC10Q5T3U5 1492 aa9.12□□□□□ -0.95
CTNND1-201ENST00000358694 ZNF839A8K0R7 811 aa9.12□□□□□ -0.95
CTNND1-201ENST00000358694 ERI2A8K979 691 aaKnown RBP9.12□□□□□ -0.95
CTNND1-201ENST00000358694 PDE5AO76074 875 aa9.12□□□□□ -0.95
CTNND1-201ENST00000358694 ZNHIT3Q15649 155 aaPredicted RBP9.12□□□□□ -0.95
CTNND1-201ENST00000358694 ZNF280DQ6N043 979 aa9.12□□□□□ -0.95
CTNND1-201ENST00000358694 ULK3Q6PHR2 472 aa9.12□□□□□ -0.95
CTNND1-201ENST00000358694 KIAA0408Q6ZU52 694 aa9.12□□□□□ -0.95
CTNND1-201ENST00000358694 SUGP1Q8IWZ8 645 aaKnown RBP9.12□□□□□ -0.95
CTNND1-201ENST00000358694 KIF2BQ8N4N8 673 aa9.12□□□□□ -0.95
CTNND1-201ENST00000358694 SMYD1Q8NB12 490 aa9.12□□□□□ -0.95
CTNND1-201ENST00000358694 SPATA4Q8NEY3 305 aa9.12□□□□□ -0.95
CTNND1-201ENST00000358694 FEZF2Q8TBJ5 459 aa9.12□□□□□ -0.95
CTNND1-201ENST00000358694 REPS1Q96D71 796 aa9.12□□□□□ -0.95
CTNND1-201ENST00000358694 REEP2Q9BRK0 252 aa9.12□□□□□ -0.95
CTNND1-201ENST00000358694 LRRC1Q9BTT6 524 aa9.12□□□□□ -0.95
CTNND1-201ENST00000358694 PI4K2AQ9BTU6 479 aa9.12□□□□□ -0.95
CTNND1-201ENST00000358694 DPY30Q9C005 99 aa9.12□□□□□ -0.95
CTNND1-201ENST00000358694 ATXN3LQ9H3M9 355 aa9.12□□□□□ -0.95
CTNND1-201ENST00000358694 COMMD8Q9NX08 183 aa9.12□□□□□ -0.95
CTNND1-201ENST00000358694 KDM5DQ9BY66 1539 aa9.12□□□□□ -0.95
CTNND1-201ENST00000358694 TBKBP1A7MCY6 615 aa9.12□□□□□ -0.95
CTNND1-201ENST00000358694 TM9SF1O15321 606 aa9.12□□□□□ -0.95
CTNND1-201ENST00000358694 GLRA3O75311 464 aa9.12□□□□□ -0.95
CTNND1-201ENST00000358694 RAG1P15918 1043 aa9.12□□□□□ -0.95
CTNND1-201ENST00000358694 ADRA2BP18089 450 aa9.12□□□□□ -0.95
CTNND1-201ENST00000358694 GTF2A2P52657 109 aa9.12□□□□□ -0.95
CTNND1-201ENST00000358694 DSG1Q02413 1049 aa9.12□□□□□ -0.95
CTNND1-201ENST00000358694 SRSF11Q05519 484 aaKnown RBP9.12□□□□□ -0.95
CTNND1-201ENST00000358694 KRT73Q86Y46 540 aa9.12□□□□□ -0.95
CTNND1-201ENST00000358694 DRG1Q9Y295 367 aaKnown RBP9.12□□□□□ -0.95
CTNND1-201ENST00000358694 PCDHB2Q9Y5E7 798 aa9.12□□□□□ -0.95
CTNND1-201ENST00000358694 COL15A1P39059 1388 aa9.12□□□□□ -0.95
CTNND1-201ENST00000358694 TSPAN3O60637 253 aa9.12□□□□□ -0.95
CTNND1-201ENST00000358694 GUCY1B2O75343 617 aa9.12□□□□□ -0.95
CTNND1-201ENST00000358694 LYNP07948 512 aa9.12□□□□□ -0.95
CTNND1-201ENST00000358694 SUPT20HL2P0C7V6 817 aa9.12□□□□□ -0.95
CTNND1-201ENST00000358694 WARSP23381 471 aaKnown RBP9.12□□□□□ -0.95
CTNND1-201ENST00000358694 ITGA1P56199 1179 aa9.12□□□□□ -0.95
CTNND1-201ENST00000358694 ATP2C1P98194 919 aaPredicted RBP9.12□□□□□ -0.95
CTNND1-201ENST00000358694 OTUD4Q01804 1114 aaKnown RBP9.12□□□□□ -0.95
CTNND1-201ENST00000358694 PLEKHA7Q6IQ23 1121 aa9.12□□□□□ -0.95
CTNND1-201ENST00000358694 CEP68Q76N32 757 aa9.12□□□□□ -0.95
CTNND1-201ENST00000358694 C3orf20Q8ND61 904 aa9.12□□□□□ -0.95
CTNND1-201ENST00000358694 ZNF473Q8WTR7 871 aaKnown RBP9.12□□□□□ -0.95
CTNND1-201ENST00000358694 GPAMQ9HCL2 828 aa9.12□□□□□ -0.95
CTNND1-201ENST00000358694 LYVE1Q9Y5Y7 322 aa9.12□□□□□ -0.95
CTNND1-201ENST00000358694 ALDH2P05091 517 aa9.11□□□□□ -0.95
CTNND1-201ENST00000358694 RAD23AP54725 363 aa9.11□□□□□ -0.95
CTNND1-201ENST00000358694 PTAR1Q7Z6K3 402 aaPredicted RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms