RNA–Protein interactions for RNA: ENST00000358161.9

SPTAN1-201, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTAN1, Length 7,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-201ENST00000358161 DDHD2O94830 711 aa10.65□□□□□ -0.7
SPTAN1-201ENST00000358161 ENO3P13929 434 aaPredicted RBP10.65□□□□□ -0.7
SPTAN1-201ENST00000358161 CXCL17Q6UXB2 119 aa10.65□□□□□ -0.7
SPTAN1-201ENST00000358161 FBXO36Q8NEA4 188 aa10.65□□□□□ -0.7
SPTAN1-201ENST00000358161 FAM162AQ96A26 154 aa10.65□□□□□ -0.7
SPTAN1-201ENST00000358161 ZNF558Q96NG5 402 aa10.65□□□□□ -0.7
SPTAN1-201ENST00000358161 NFKBIZQ9BYH8 718 aa10.65□□□□□ -0.7
SPTAN1-201ENST00000358161 DYRK1BQ9Y463 629 aa10.65□□□□□ -0.7
SPTAN1-201ENST00000358161 ZW10O43264 779 aa10.65□□□□□ -0.7
SPTAN1-201ENST00000358161 ACAT1P24752 427 aaKnown RBP10.65□□□□□ -0.7
SPTAN1-201ENST00000358161 KBTBD12Q3ZCT8 623 aa10.65□□□□□ -0.7
SPTAN1-201ENST00000358161 SUGP1Q8IWZ8 645 aaKnown RBP10.65□□□□□ -0.7
SPTAN1-201ENST00000358161 EMC1Q8N766 993 aa10.65□□□□□ -0.7
SPTAN1-201ENST00000358161 PACSIN1Q9BY11 444 aa10.65□□□□□ -0.7
SPTAN1-201ENST00000358161 VANGL2Q9ULK5 521 aa10.65□□□□□ -0.7
SPTAN1-201ENST00000358161 SF3B1O75533 1304 aaKnown RBP eCLIP10.65□□□□□ -0.71
SPTAN1-201ENST00000358161 ALOX15P16050 662 aaPredicted RBP10.65□□□□□ -0.71
SPTAN1-201ENST00000358161 EIF4BP23588 611 aaKnown RBP10.65□□□□□ -0.71
SPTAN1-201ENST00000358161 WEE1P30291 646 aa10.65□□□□□ -0.71
SPTAN1-201ENST00000358161 SLC2A14Q8TDB8 520 aa10.65□□□□□ -0.71
SPTAN1-201ENST00000358161 MAF1Q9H063 256 aa10.65□□□□□ -0.71
SPTAN1-201ENST00000358161 ABCC13Q9NSE7 274 aa10.65□□□□□ -0.71
SPTAN1-201ENST00000358161 TNFSF13BQ9Y275 285 aa10.65□□□□□ -0.71
SPTAN1-201ENST00000358161 EIF3HO15372 352 aaKnown RBP eCLIP10.64□□□□□ -0.713e-6■■□□□ 13
SPTAN1-201ENST00000358161 DYRK3O43781 588 aa10.64□□□□□ -0.71
SPTAN1-201ENST00000358161 PSMD10O75832 226 aa10.64□□□□□ -0.71
SPTAN1-201ENST00000358161 OCA2Q04671 838 aa10.64□□□□□ -0.71
SPTAN1-201ENST00000358161 DENND1BQ6P3S1 775 aa10.64□□□□□ -0.71
SPTAN1-201ENST00000358161 UNC93AQ86WB7 457 aa10.64□□□□□ -0.71
SPTAN1-201ENST00000358161 ZCCHC2Q9C0B9 1178 aaKnown RBP10.64□□□□□ -0.71
SPTAN1-201ENST00000358161 PABPC3Q9H361 631 aaKnown RBP10.64□□□□□ -0.71
SPTAN1-201ENST00000358161 COPS7BQ9H9Q2 264 aaPredicted RBP10.64□□□□□ -0.71
SPTAN1-201ENST00000358161 RBM22Q9NW64 420 aaKnown RBP eCLIP10.64□□□□□ -0.715e-6■□□□□ 8.3
SPTAN1-201ENST00000358161 TRHDEQ9UKU6 1024 aa10.64□□□□□ -0.71
SPTAN1-201ENST00000358161 RUVBL2Q9Y230 463 aaKnown RBP10.64□□□□□ -0.71
SPTAN1-201ENST00000358161 SCNN1BP51168 640 aa10.64□□□□□ -0.71
SPTAN1-201ENST00000358161 SLC6A3Q01959 620 aa10.64□□□□□ -0.71
SPTAN1-201ENST00000358161 SKA1Q96BD8 255 aa10.64□□□□□ -0.71
SPTAN1-201ENST00000358161 PGLYRP2Q96PD5 576 aa10.64□□□□□ -0.71
SPTAN1-201ENST00000358161 TSEN34Q9BSV6 310 aaKnown RBP10.64□□□□□ -0.71
SPTAN1-201ENST00000358161 ATRNO75882 1429 aa10.64□□□□□ -0.71
SPTAN1-201ENST00000358161 IFRD1O00458 451 aaPredicted RBP10.64□□□□□ -0.71
SPTAN1-201ENST00000358161 SLC9A3R1O14745 358 aaPredicted RBP10.64□□□□□ -0.71
SPTAN1-201ENST00000358161 PCDH8O95206 1070 aa10.64□□□□□ -0.71
SPTAN1-201ENST00000358161 TUBP50607 506 aa10.64□□□□□ -0.71
SPTAN1-201ENST00000358161 TGM3Q08188 693 aa10.64□□□□□ -0.71
SPTAN1-201ENST00000358161 EARS2Q5JPH6 523 aaKnown RBP10.64□□□□□ -0.71
SPTAN1-201ENST00000358161 C1orf186Q6ZWK4 172 aa10.64□□□□□ -0.71
SPTAN1-201ENST00000358161 PHACTR4Q8IZ21 702 aa10.64□□□□□ -0.71
SPTAN1-201ENST00000358161 COLGALT1Q8NBJ5 622 aa10.64□□□□□ -0.71
SPTAN1-201ENST00000358161 ATG4AQ8WYN0 398 aa10.64□□□□□ -0.71
SPTAN1-201ENST00000358161 SENP8Q96LD8 212 aa10.64□□□□□ -0.71
SPTAN1-201ENST00000358161 POPDC2Q9HBU9 364 aa10.64□□□□□ -0.71
SPTAN1-201ENST00000358161 IARS2Q9NSE4 1012 aaKnown RBP10.64□□□□□ -0.71
SPTAN1-201ENST00000358161 HACD1B0YJ81 288 aa10.64□□□□□ -0.71
SPTAN1-201ENST00000358161 SPATA31C2B4DYI2 1134 aa10.64□□□□□ -0.71
SPTAN1-201ENST00000358161 IGSF6O95976 241 aa10.64□□□□□ -0.71
SPTAN1-201ENST00000358161 RBP1P09455 135 aa10.64□□□□□ -0.71
SPTAN1-201ENST00000358161 AGGF1Q8N302 714 aaeCLIP10.64□□□□□ -0.718e-6■□□□□ 8.6
SPTAN1-201ENST00000358161 ZNF333Q96JL9 665 aa10.64□□□□□ -0.71
SPTAN1-201ENST00000358161 GAD1Q99259 594 aa10.64□□□□□ -0.71
SPTAN1-201ENST00000358161 C1QTNF7Q9BXJ2 289 aa10.64□□□□□ -0.71
SPTAN1-201ENST00000358161 TMEM150BA6NC51 233 aa10.64□□□□□ -0.71
SPTAN1-201ENST00000358161 TMEM88BA6NKF7 163 aa10.64□□□□□ -0.71
SPTAN1-201ENST00000358161 MAFO75444 373 aaPredicted RBP10.64□□□□□ -0.71
SPTAN1-201ENST00000358161 SGCGQ13326 291 aa10.64□□□□□ -0.71
SPTAN1-201ENST00000358161 BTNL9Q6UXG8 535 aa10.64□□□□□ -0.71
SPTAN1-201ENST00000358161 DDX42Q86XP3 938 aaKnown RBP eCLIP10.64□□□□□ -0.71
SPTAN1-201ENST00000358161 C3orf20Q8ND61 904 aa10.64□□□□□ -0.71
SPTAN1-201ENST00000358161 ARMC2Q8NEN0 867 aa10.64□□□□□ -0.71
SPTAN1-201ENST00000358161 OTULINQ96BN8 352 aa10.64□□□□□ -0.71
SPTAN1-201ENST00000358161 RBAK-RBAKDNI3L0D1 243 aa10.64□□□□□ -0.71
SPTAN1-201ENST00000358161 CYP2A6P11509 494 aaPredicted RBP10.64□□□□□ -0.71
SPTAN1-201ENST00000358161 CNTN1Q12860 1018 aa10.64□□□□□ -0.71
SPTAN1-201ENST00000358161 C11orf96Q7Z7L8 435 aa10.64□□□□□ -0.71
SPTAN1-201ENST00000358161 TMEM121Q9BTD3 319 aa10.64□□□□□ -0.71
SPTAN1-201ENST00000358161 PCDH9Q9HC56 1237 aa10.64□□□□□ -0.71
SPTAN1-201ENST00000358161 NCKAP1Q9Y2A7 1128 aa10.64□□□□□ -0.71
SPTAN1-201ENST00000358161 ENDOD1O94919 500 aa10.63□□□□□ -0.71
SPTAN1-201ENST00000358161 FKBP9O95302 570 aa10.63□□□□□ -0.71
SPTAN1-201ENST00000358161 MAP3K6O95382 1288 aa10.63□□□□□ -0.71
SPTAN1-201ENST00000358161 SARSP49591 514 aaKnown RBP10.63□□□□□ -0.71
SPTAN1-201ENST00000358161 SKOR1P84550 965 aa10.63□□□□□ -0.71
SPTAN1-201ENST00000358161 MTM1Q13496 603 aa10.63□□□□□ -0.71
SPTAN1-201ENST00000358161 FLOT2Q14254 428 aa10.63□□□□□ -0.71
SPTAN1-201ENST00000358161 FKBP9P1Q75LS8 142 aa10.63□□□□□ -0.71
SPTAN1-201ENST00000358161 ZNF438Q7Z4V0 828 aa10.63□□□□□ -0.71
SPTAN1-201ENST00000358161 ZIM3Q96PE6 472 aa10.63□□□□□ -0.71
SPTAN1-201ENST00000358161 HTATIP2Q9BUP3 242 aa10.63□□□□□ -0.71
SPTAN1-201ENST00000358161 TFR2Q9UP52 801 aa10.63□□□□□ -0.71
SPTAN1-201ENST00000358161 COL1A2P08123 1366 aa10.63□□□□□ -0.71
SPTAN1-201ENST00000358161 PHF20L1A8MW92 1017 aa10.63□□□□□ -0.71
SPTAN1-201ENST00000358161 MSH3P20585 1137 aa10.63□□□□□ -0.71
SPTAN1-201ENST00000358161 MLH1P40692 756 aa10.63□□□□□ -0.71
SPTAN1-201ENST00000358161 NFIL3Q16649 462 aa10.63□□□□□ -0.71
SPTAN1-201ENST00000358161 CES5AQ6NT32 575 aa10.63□□□□□ -0.71
SPTAN1-201ENST00000358161 SUFUQ9UMX1 484 aa10.63□□□□□ -0.71
SPTAN1-201ENST00000358161 MEIS2O14770 477 aa10.63□□□□□ -0.71
SPTAN1-201ENST00000358161 CCDC130P13994 396 aa10.63□□□□□ -0.71
SPTAN1-201ENST00000358161 HSD17B3P37058 310 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms