RNA–Protein interactions for RNA: ENST00000354433.7

CDRT1-202, CMT1A duplicated region transcript 1, humanhuman

TSL 2 BASIC

Gene CDRT1, Length 1,557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-202ENST00000354433 FMNL3Q8IVF7 1028 aa12.15□□□□□ -0.46
CDRT1-202ENST00000354433 C12orf29Q8N999 325 aa12.15□□□□□ -0.46
CDRT1-202ENST00000354433 SCAMP5Q8TAC9 235 aa12.15□□□□□ -0.46
CDRT1-202ENST00000354433 NELL1Q92832 810 aa12.15□□□□□ -0.46
CDRT1-202ENST00000354433 NT5C1AQ9BXI3 368 aa12.15□□□□□ -0.46
CDRT1-202ENST00000354433 NHEJ1Q9H9Q4 299 aaPredicted RBP12.15□□□□□ -0.46
CDRT1-202ENST00000354433 AIPL1Q9NZN9 384 aa12.15□□□□□ -0.46
CDRT1-202ENST00000354433 CFAP97Q9P2B7 532 aa12.15□□□□□ -0.46
CDRT1-202ENST00000354433 SLC8A2Q9UPR5 921 aa12.15□□□□□ -0.46
CDRT1-202ENST00000354433 LRRC53A6NM62 1247 aa12.14□□□□□ -0.47
CDRT1-202ENST00000354433 ATG13O75143 517 aa12.14□□□□□ -0.47
CDRT1-202ENST00000354433 IPO7O95373 1038 aaKnown RBP12.14□□□□□ -0.47
CDRT1-202ENST00000354433 LCA5LO95447 670 aa12.14□□□□□ -0.47
CDRT1-202ENST00000354433 OAS1P00973 400 aaKnown RBP12.14□□□□□ -0.47
CDRT1-202ENST00000354433 TCF3P15923 654 aa12.14□□□□□ -0.47
CDRT1-202ENST00000354433 GALK1P51570 392 aa12.14□□□□□ -0.47
CDRT1-202ENST00000354433 POLR2FP61218 127 aaKnown RBP12.14□□□□□ -0.47
CDRT1-202ENST00000354433 SLC7A9P82251 487 aa12.14□□□□□ -0.47
CDRT1-202ENST00000354433 DMWDQ09019 674 aa12.14□□□□□ -0.47
CDRT1-202ENST00000354433 CETN1Q12798 172 aa12.14□□□□□ -0.47
CDRT1-202ENST00000354433 SIM2Q14190 667 aaPredicted RBP12.14□□□□□ -0.47
CDRT1-202ENST00000354433 ZNF394Q53GI3 561 aa12.14□□□□□ -0.47
CDRT1-202ENST00000354433 HECTD3Q5T447 861 aa12.14□□□□□ -0.47
CDRT1-202ENST00000354433 KLHDC7AQ5VTJ3 777 aa12.14□□□□□ -0.47
CDRT1-202ENST00000354433 SFMBT2Q5VUG0 894 aa12.14□□□□□ -0.47
CDRT1-202ENST00000354433 PKN3Q6P5Z2 889 aa12.14□□□□□ -0.47
CDRT1-202ENST00000354433 PAQR9Q6ZVX9 377 aa12.14□□□□□ -0.47
CDRT1-202ENST00000354433 CEP68Q76N32 757 aa12.14□□□□□ -0.47
CDRT1-202ENST00000354433 LONP2Q86WA8 852 aa12.14□□□□□ -0.47
CDRT1-202ENST00000354433 DDX42Q86XP3 938 aaKnown RBP eCLIP12.14□□□□□ -0.47
CDRT1-202ENST00000354433 RPLP0P6Q8NHW5 317 aa12.14□□□□□ -0.47
CDRT1-202ENST00000354433 OVCA2Q8WZ82 227 aa12.14□□□□□ -0.47
CDRT1-202ENST00000354433 TWNKQ96RR1 684 aa12.14□□□□□ -0.47
CDRT1-202ENST00000354433 CRACR2AQ9BSW2 395 aa12.14□□□□□ -0.47
CDRT1-202ENST00000354433 DESI2Q9BSY9 194 aa12.14□□□□□ -0.47
CDRT1-202ENST00000354433 RNF38Q9H0F5 515 aa12.14□□□□□ -0.47
CDRT1-202ENST00000354433 APOBEC3GQ9HC16 384 aaKnown RBP12.14□□□□□ -0.47
CDRT1-202ENST00000354433 C2orf42Q9NWW7 574 aa12.14□□□□□ -0.47
CDRT1-202ENST00000354433 GMIPQ9P107 970 aa12.14□□□□□ -0.47
CDRT1-202ENST00000354433 MYO1AQ9UBC5 1043 aa12.14□□□□□ -0.47
CDRT1-202ENST00000354433 CHORDC1Q9UHD1 332 aaPredicted RBP12.14□□□□□ -0.47
CDRT1-202ENST00000354433 USP18Q9UMW8 372 aa12.14□□□□□ -0.47
CDRT1-202ENST00000354433 SH3BP1Q9Y3L3 701 aa12.14□□□□□ -0.47
CDRT1-202ENST00000354433 EP300Q09472 2414 aaPredicted RBP12.14□□□□□ -0.47
CDRT1-202ENST00000354433 KIF26AQ9ULI4 1882 aaPredicted RBP12.14□□□□□ -0.47
CDRT1-202ENST00000354433 K7ESF4 209 aa12.13□□□□□ -0.47
CDRT1-202ENST00000354433 SLC9A3R1O14745 358 aaPredicted RBP12.13□□□□□ -0.47
CDRT1-202ENST00000354433 BEST1O76090 585 aa12.13□□□□□ -0.47
CDRT1-202ENST00000354433 PAPSS2O95340 614 aaPredicted RBP12.13□□□□□ -0.47
CDRT1-202ENST00000354433 OLFM2O95897 454 aa12.13□□□□□ -0.47
CDRT1-202ENST00000354433 SERPING1P05155 500 aa12.13□□□□□ -0.47
CDRT1-202ENST00000354433 IRF1P10914 325 aa12.13□□□□□ -0.47
CDRT1-202ENST00000354433 UCHL3P15374 230 aa12.13□□□□□ -0.47
CDRT1-202ENST00000354433 GTF2H1P32780 548 aa12.13□□□□□ -0.47
CDRT1-202ENST00000354433 PXNP49023 591 aaPredicted RBP12.13□□□□□ -0.47
CDRT1-202ENST00000354433 ZXDBP98169 803 aa12.13□□□□□ -0.47
CDRT1-202ENST00000354433 INCA1Q0VD86 236 aa12.13□□□□□ -0.47
CDRT1-202ENST00000354433 SRSF5Q13243 272 aaKnown RBP12.13□□□□□ -0.47
CDRT1-202ENST00000354433 FBXO43Q4G163 708 aa12.13□□□□□ -0.47
CDRT1-202ENST00000354433 TXLNBQ8N3L3 684 aa12.13□□□□□ -0.47
CDRT1-202ENST00000354433 FBXL13Q8NEE6 735 aa12.13□□□□□ -0.47
CDRT1-202ENST00000354433 CYFIP2Q96F07 1278 aa12.13□□□□□ -0.47
CDRT1-202ENST00000354433 CCDC42Q96M95 316 aa12.13□□□□□ -0.47
CDRT1-202ENST00000354433 SMOQ99835 787 aa12.13□□□□□ -0.47
CDRT1-202ENST00000354433 LINC00597Q9H2U6 94 aa12.13□□□□□ -0.47
CDRT1-202ENST00000354433 FBXO44Q9H4M3 255 aa12.13□□□□□ -0.47
CDRT1-202ENST00000354433 HAUS4Q9H6D7 363 aa12.13□□□□□ -0.47
CDRT1-202ENST00000354433 CYP3A43Q9HB55 503 aa12.13□□□□□ -0.47
CDRT1-202ENST00000354433 FBRSL1Q9HCM7 1045 aaKnown RBP12.13□□□□□ -0.47
CDRT1-202ENST00000354433 BZW2Q9Y6E2 419 aaKnown RBP12.13□□□□□ -0.47
CDRT1-202ENST00000354433 ZNF638Q14966 1978 aaKnown RBP12.13□□□□□ -0.47
CDRT1-202ENST00000354433 PTPRDP23468 1912 aa12.13□□□□□ -0.47
CDRT1-202ENST00000354433 DENND4CQ5VZ89 1909 aa12.13□□□□□ -0.47
CDRT1-202ENST00000354433 COCHO43405 550 aa12.13□□□□□ -0.47
CDRT1-202ENST00000354433 CILPO75339 1184 aa12.13□□□□□ -0.47
CDRT1-202ENST00000354433 SLC9A1P19634 815 aa12.13□□□□□ -0.47
CDRT1-202ENST00000354433 CRYBG2Q8N1P7 616 aa12.13□□□□□ -0.47
CDRT1-202ENST00000354433 ACRBPQ8NEB7 543 aa12.13□□□□□ -0.47
CDRT1-202ENST00000354433 ZMIZ2Q8NF64 920 aa12.13□□□□□ -0.47
CDRT1-202ENST00000354433 MYRIPQ8NFW9 859 aa12.13□□□□□ -0.47
CDRT1-202ENST00000354433 ACDQ96AP0 544 aa12.13□□□□□ -0.47
CDRT1-202ENST00000354433 HHIPQ96QV1 700 aa12.13□□□□□ -0.47
CDRT1-202ENST00000354433 CCSER2Q9H7U1 834 aa12.13□□□□□ -0.47
CDRT1-202ENST00000354433 SIX2Q9NPC8 291 aa12.13□□□□□ -0.47
CDRT1-202ENST00000354433 NLRC4Q9NPP4 1024 aa12.13□□□□□ -0.47
CDRT1-202ENST00000354433 TLR8Q9NR97 1041 aaKnown RBP12.13□□□□□ -0.47
CDRT1-202ENST00000354433 RAB20Q9NX57 234 aa12.13□□□□□ -0.47
CDRT1-202ENST00000354433 ARHGAP20Q9P2F6 1191 aa12.13□□□□□ -0.47
CDRT1-202ENST00000354433 GPR179Q6PRD1 2367 aa12.13□□□□□ -0.47
CDRT1-202ENST00000354433 TNFRSF10BO14763 440 aa12.12□□□□□ -0.47
CDRT1-202ENST00000354433 KIF5CO60282 957 aa12.12□□□□□ -0.47
CDRT1-202ENST00000354433 TLR5O60602 858 aa12.12□□□□□ -0.47
CDRT1-202ENST00000354433 ADH1CP00326 375 aa12.12□□□□□ -0.47
CDRT1-202ENST00000354433 CYP17A1P05093 508 aa12.12□□□□□ -0.47
CDRT1-202ENST00000354433 ACO1P21399 889 aaKnown RBP12.12□□□□□ -0.47
CDRT1-202ENST00000354433 HOXC13P31276 330 aa12.12□□□□□ -0.47
CDRT1-202ENST00000354433 CNR2P34972 360 aa12.12□□□□□ -0.47
CDRT1-202ENST00000354433 PRKCIP41743 596 aa12.12□□□□□ -0.47
CDRT1-202ENST00000354433 TUBP50607 506 aa12.12□□□□□ -0.47
CDRT1-202ENST00000354433 SEC13P55735 322 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms