RNA–Protein interactions for RNA: ENST00000345392.2

VHL-202, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best) BASIC

Gene VHL, Length 2,696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-202ENST00000345392 ZNF518BQ9C0D4 1074 aa18.43■□□□□ 0.54
VHL-202ENST00000345392 DNAJC16Q9Y2G8 782 aa18.43■□□□□ 0.54
VHL-202ENST00000345392 LOC100653049A0A140TA62 436 aa18.43■□□□□ 0.54
VHL-202ENST00000345392 KCNN4O15554 427 aa18.43■□□□□ 0.54
VHL-202ENST00000345392 SPAG6O75602 509 aa18.43■□□□□ 0.54
VHL-202ENST00000345392 KRT34O76011 436 aa18.43■□□□□ 0.54
VHL-202ENST00000345392 PABPC4LP0CB38 370 aaKnown RBP18.43■□□□□ 0.54
VHL-202ENST00000345392 KCNA2P16389 499 aa18.43■□□□□ 0.54
VHL-202ENST00000345392 AOC1P19801 751 aa18.43■□□□□ 0.54
VHL-202ENST00000345392 TRIP10Q15642 601 aa18.43■□□□□ 0.54
VHL-202ENST00000345392 LGSNQ5TDP6 509 aa18.43■□□□□ 0.54
VHL-202ENST00000345392 SNRNP48Q6IEG0 339 aaKnown RBP18.43■□□□□ 0.54
VHL-202ENST00000345392 CAND1Q86VP6 1230 aaKnown RBP18.43■□□□□ 0.54
VHL-202ENST00000345392 SPATA24Q86W54 205 aa18.43■□□□□ 0.54
VHL-202ENST00000345392 STKLD1Q8NE28 680 aa18.43■□□□□ 0.54
VHL-202ENST00000345392 PNPLA8Q9NP80 782 aa18.43■□□□□ 0.54
VHL-202ENST00000345392 USP18Q9UMW8 372 aa18.43■□□□□ 0.54
VHL-202ENST00000345392 MAD1L1Q9Y6D9 718 aa18.43■□□□□ 0.54
VHL-202ENST00000345392 KIAA1217Q5T5P2 1943 aa18.42■□□□□ 0.54
VHL-202ENST00000345392 VWA5AO00534 786 aa18.42■□□□□ 0.54
VHL-202ENST00000345392 CREB3O43889 395 aa18.42■□□□□ 0.54
VHL-202ENST00000345392 PSAPP07602 524 aa18.42■□□□□ 0.54
VHL-202ENST00000345392 CDH6P55285 790 aa18.42■□□□□ 0.54
VHL-202ENST00000345392 USP4Q13107 963 aa18.42■□□□□ 0.54
VHL-202ENST00000345392 SLFN12LQ6IEE8 588 aa18.42■□□□□ 0.54
VHL-202ENST00000345392 AAGABQ6PD74 315 aa18.42■□□□□ 0.54
VHL-202ENST00000345392 VSIG10LQ86VR7 867 aa18.42■□□□□ 0.54
VHL-202ENST00000345392 ADGRF2Q8IZF7 708 aa18.42■□□□□ 0.54
VHL-202ENST00000345392 CMASQ8NFW8 434 aaPredicted RBP18.42■□□□□ 0.54
VHL-202ENST00000345392 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.42■□□□□ 0.543e-8■□□□□ 10.1
VHL-202ENST00000345392 PEBP4Q96S96 227 aa18.42■□□□□ 0.54
VHL-202ENST00000345392 CCDC28BQ9BUN5 200 aa18.42■□□□□ 0.54
VHL-202ENST00000345392 H0YCG3 227 aa18.42■□□□□ 0.54
VHL-202ENST00000345392 ZMPSTE24O75844 475 aa18.42■□□□□ 0.54
VHL-202ENST00000345392 LDHAP00338 332 aaKnown RBP18.42■□□□□ 0.54
VHL-202ENST00000345392 RAP1GAPP47736 663 aa18.42■□□□□ 0.54
VHL-202ENST00000345392 TGFB2P61812 414 aa18.42■□□□□ 0.54
VHL-202ENST00000345392 RPL10AP62906 217 aaKnown RBP18.42■□□□□ 0.54
VHL-202ENST00000345392 CXCL9Q07325 125 aa18.42■□□□□ 0.54
VHL-202ENST00000345392 WASHC5Q12768 1159 aa18.42■□□□□ 0.54
VHL-202ENST00000345392 TUBB3Q13509 450 aa18.42■□□□□ 0.54
VHL-202ENST00000345392 TBCCQ15814 346 aa18.42■□□□□ 0.54
VHL-202ENST00000345392 HPS6Q86YV9 775 aa18.42■□□□□ 0.54
VHL-202ENST00000345392 TMEM130Q8N3G9 435 aa18.42■□□□□ 0.54
VHL-202ENST00000345392 JPH1Q9HDC5 661 aaPredicted RBP18.42■□□□□ 0.54
VHL-202ENST00000345392 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.42■□□□□ 0.543e-6■□□□□ 9.2
VHL-202ENST00000345392 THAP1Q9NVV9 213 aa18.42■□□□□ 0.54
VHL-202ENST00000345392 ZDHHC7Q9NXF8 308 aa18.42■□□□□ 0.54
VHL-202ENST00000345392 NXF1Q9UBU9 619 aaKnown RBP18.42■□□□□ 0.54
VHL-202ENST00000345392 HEY1Q9Y5J3 304 aa18.42■□□□□ 0.54
VHL-202ENST00000345392 PIK3R2O00459 728 aa18.41■□□□□ 0.54
VHL-202ENST00000345392 CHADO15335 359 aa18.41■□□□□ 0.54
VHL-202ENST00000345392 ERBB2P04626 1255 aa18.41■□□□□ 0.54
VHL-202ENST00000345392 VAV1P15498 845 aa18.41■□□□□ 0.54
VHL-202ENST00000345392 OSBPP22059 807 aa18.41■□□□□ 0.54
VHL-202ENST00000345392 KCNA4P22459 653 aa18.41■□□□□ 0.54
VHL-202ENST00000345392 CCND2P30279 289 aa18.41■□□□□ 0.54
VHL-202ENST00000345392 ACTR2P61160 394 aa18.41■□□□□ 0.54
VHL-202ENST00000345392 FSTL1Q12841 308 aa18.41■□□□□ 0.54
VHL-202ENST00000345392 PDK3Q15120 406 aa18.41■□□□□ 0.54
VHL-202ENST00000345392 NOMO1Q15155 1222 aa18.41■□□□□ 0.54
VHL-202ENST00000345392 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.41■□□□□ 0.54
VHL-202ENST00000345392 FASTKD1Q53R41 847 aaKnown RBP18.41■□□□□ 0.54
VHL-202ENST00000345392 FBXL19Q6PCT2 694 aa18.41■□□□□ 0.54
VHL-202ENST00000345392 UNC5AQ6ZN44 842 aa18.41■□□□□ 0.54
VHL-202ENST00000345392 ADGRG6Q86SQ4 1221 aa18.41■□□□□ 0.54
VHL-202ENST00000345392 FAM83AQ86UY5 434 aa18.41■□□□□ 0.54
VHL-202ENST00000345392 NME8Q8N427 588 aa18.41■□□□□ 0.54
VHL-202ENST00000345392 TTLL6Q8N841 843 aa18.41■□□□□ 0.54
VHL-202ENST00000345392 NLGN2Q8NFZ4 835 aa18.41■□□□□ 0.54
VHL-202ENST00000345392 TCHPQ9BT92 498 aa18.41■□□□□ 0.54
VHL-202ENST00000345392 NIF3L1Q9GZT8 377 aa18.41■□□□□ 0.54
VHL-202ENST00000345392 ZNF180Q9UJW8 692 aa18.41■□□□□ 0.54
VHL-202ENST00000345392 G3BP2Q9UN86 482 aaKnown RBP18.41■□□□□ 0.54
VHL-202ENST00000345392 WDR81Q562E7 1941 aa18.41■□□□□ 0.54
VHL-202ENST00000345392 KRT38O76015 456 aa18.41■□□□□ 0.54
VHL-202ENST00000345392 TRUB2O95900 331 aaKnown RBP18.41■□□□□ 0.54
VHL-202ENST00000345392 APOEP02649 317 aa18.41■□□□□ 0.54
VHL-202ENST00000345392 PRKCHP24723 683 aa18.41■□□□□ 0.54
VHL-202ENST00000345392 POLR2BP30876 1174 aaKnown RBP18.41■□□□□ 0.54
VHL-202ENST00000345392 CDH5P33151 784 aaPredicted RBP18.41■□□□□ 0.54
VHL-202ENST00000345392 SP2Q02086 613 aa18.41■□□□□ 0.54
VHL-202ENST00000345392 PABPC1LQ4VXU2 614 aaKnown RBP18.41■□□□□ 0.54
VHL-202ENST00000345392 WDR75Q8IWA0 830 aaKnown RBP18.41■□□□□ 0.54
VHL-202ENST00000345392 MPP5Q8N3R9 675 aa18.41■□□□□ 0.54
VHL-202ENST00000345392 SGIP1Q9BQI5 828 aa18.41■□□□□ 0.54
VHL-202ENST00000345392 USP29Q9HBJ7 922 aa18.41■□□□□ 0.54
VHL-202ENST00000345392 PCDHGC3Q9UN70 934 aa18.41■□□□□ 0.54
VHL-202ENST00000345392 ADGRA2Q96PE1 1338 aa18.41■□□□□ 0.54
VHL-202ENST00000345392 SLC15A5A6NIM6 579 aa18.4■□□□□ 0.54
VHL-202ENST00000345392 ATG7O95352 703 aa18.4■□□□□ 0.54
VHL-202ENST00000345392 RAG1P15918 1043 aa18.4■□□□□ 0.54
VHL-202ENST00000345392 RBL1P28749 1068 aa18.4■□□□□ 0.54
VHL-202ENST00000345392 COPAP53621 1224 aa18.4■□□□□ 0.54
VHL-202ENST00000345392 SMAD1Q15797 465 aaKnown RBP18.4■□□□□ 0.54
VHL-202ENST00000345392 GRAMD1BQ3KR37 738 aa18.4■□□□□ 0.54
VHL-202ENST00000345392 VWA5B1Q5TIE3 1220 aa18.4■□□□□ 0.54
VHL-202ENST00000345392 ATG14Q6ZNE5 492 aa18.4■□□□□ 0.54
VHL-202ENST00000345392 RDM1Q8NG50 284 aa18.4■□□□□ 0.54
VHL-202ENST00000345392 PIWIL2Q8TC59 973 aaKnown RBP18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms