RNA–Protein interactions for RNA: ENST00000341394.8

CAPRIN1-201, Transcript of cell cycle associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CAPRIN1, Length 4,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-201ENST00000341394 WARS2Q9UGM6 360 aaKnown RBP10.84□□□□□ -0.67
CAPRIN1-201ENST00000341394 TLK1Q9UKI8 766 aa10.84□□□□□ -0.67
CAPRIN1-201ENST00000341394 GNEQ9Y223 722 aaKnown RBP10.84□□□□□ -0.67
CAPRIN1-201ENST00000341394 PCDHGC5Q9Y5F6 944 aa10.84□□□□□ -0.67
CAPRIN1-201ENST00000341394 SDK1Q7Z5N4 2213 aa10.84□□□□□ -0.67
CAPRIN1-201ENST00000341394 RNF103-CHMP3A0A140T963 221 aa10.84□□□□□ -0.67
CAPRIN1-201ENST00000341394 E9PBE3 544 aa10.84□□□□□ -0.67
CAPRIN1-201ENST00000341394 KLHL41O60662 606 aa10.84□□□□□ -0.67
CAPRIN1-201ENST00000341394 SERPINB5P36952 375 aa10.84□□□□□ -0.67
CAPRIN1-201ENST00000341394 CACNA2D1P54289 1103 aa10.84□□□□□ -0.67
CAPRIN1-201ENST00000341394 AP2B1P63010 937 aa10.84□□□□□ -0.67
CAPRIN1-201ENST00000341394 EFTUD2Q15029 972 aaKnown RBP eCLIP10.84□□□□□ -0.674e-6■■■■■ 28.2
CAPRIN1-201ENST00000341394 BZW1Q7L1Q6 419 aaKnown RBP10.84□□□□□ -0.67
CAPRIN1-201ENST00000341394 KIAA0319LQ8IZA0 1049 aa10.84□□□□□ -0.67
CAPRIN1-201ENST00000341394 FITM2Q8N6M3 262 aa10.84□□□□□ -0.67
CAPRIN1-201ENST00000341394 TMC2Q8TDI7 906 aa10.84□□□□□ -0.67
CAPRIN1-201ENST00000341394 ANKRD36BP1Q96IX9 119 aa10.84□□□□□ -0.67
CAPRIN1-201ENST00000341394 CENPKQ9BS16 269 aa10.84□□□□□ -0.67
CAPRIN1-201ENST00000341394 MECRQ9BV79 373 aa10.84□□□□□ -0.67
CAPRIN1-201ENST00000341394 TBC1D10AQ9BXI6 508 aa10.84□□□□□ -0.67
CAPRIN1-201ENST00000341394 PIF1Q9H611 641 aa10.84□□□□□ -0.67
CAPRIN1-201ENST00000341394 PIN4Q9Y237 131 aaKnown RBP10.84□□□□□ -0.67
CAPRIN1-201ENST00000341394 R3HDM2Q9Y2K5 976 aaKnown RBP10.84□□□□□ -0.67
CAPRIN1-201ENST00000341394 RANBP2P49792 3224 aaKnown RBP10.84□□□□□ -0.67
CAPRIN1-201ENST00000341394 GTPBP10A4D1E9 387 aaKnown RBP10.83□□□□□ -0.68
CAPRIN1-201ENST00000341394 SEPT4O43236 478 aa10.83□□□□□ -0.68
CAPRIN1-201ENST00000341394 FKTNO75072 461 aa10.83□□□□□ -0.68
CAPRIN1-201ENST00000341394 LCP1P13796 627 aa10.83□□□□□ -0.68
CAPRIN1-201ENST00000341394 MED21Q13503 144 aa10.83□□□□□ -0.68
CAPRIN1-201ENST00000341394 TSTA3Q13630 321 aaPredicted RBP10.83□□□□□ -0.68
CAPRIN1-201ENST00000341394 CNGA3Q16281 694 aa10.83□□□□□ -0.68
CAPRIN1-201ENST00000341394 DIS3LQ8TF46 1054 aaKnown RBP10.83□□□□□ -0.68
CAPRIN1-201ENST00000341394 KDM4CQ9H3R0 1056 aa10.83□□□□□ -0.68
CAPRIN1-201ENST00000341394 SRRDQ9UH36 339 aa10.83□□□□□ -0.68
CAPRIN1-201ENST00000341394 ZNF236Q9UL36 1845 aa10.83□□□□□ -0.68
CAPRIN1-201ENST00000341394 A0A0B4J269 797 aa10.83□□□□□ -0.68
CAPRIN1-201ENST00000341394 F8VP50 259 aa10.83□□□□□ -0.68
CAPRIN1-201ENST00000341394 F7P08709 466 aaPredicted RBP10.83□□□□□ -0.68
CAPRIN1-201ENST00000341394 KCNA4P22459 653 aa10.83□□□□□ -0.68
CAPRIN1-201ENST00000341394 CCND3P30281 292 aaPredicted RBP10.83□□□□□ -0.68
CAPRIN1-201ENST00000341394 JAM2P57087 298 aa10.83□□□□□ -0.68
CAPRIN1-201ENST00000341394 RPL10AP62906 217 aaKnown RBP10.83□□□□□ -0.68
CAPRIN1-201ENST00000341394 FASTKD3Q14CZ7 662 aaKnown RBP10.83□□□□□ -0.68
CAPRIN1-201ENST00000341394 DUOXA2Q1HG44 320 aa10.83□□□□□ -0.68
CAPRIN1-201ENST00000341394 ZNF667Q5HYK9 610 aa10.83□□□□□ -0.68
CAPRIN1-201ENST00000341394 TWF2Q6IBS0 349 aaKnown RBP10.83□□□□□ -0.68
CAPRIN1-201ENST00000341394 RNF180Q86T96 592 aa10.83□□□□□ -0.68
CAPRIN1-201ENST00000341394 TMEM192Q8IY95 271 aa10.83□□□□□ -0.68
CAPRIN1-201ENST00000341394 CDC26Q8NHZ8 85 aa10.83□□□□□ -0.68
CAPRIN1-201ENST00000341394 ACTL9Q8TC94 416 aa10.83□□□□□ -0.68
CAPRIN1-201ENST00000341394 SCG3Q8WXD2 468 aaKnown RBP10.83□□□□□ -0.68
CAPRIN1-201ENST00000341394 KLHL8Q9P2G9 620 aaPredicted RBP10.83□□□□□ -0.68
CAPRIN1-201ENST00000341394 COL1A2P08123 1366 aa10.83□□□□□ -0.68
CAPRIN1-201ENST00000341394 IGKV6-21A0A0C4DH24 114 aa10.83□□□□□ -0.68
CAPRIN1-201ENST00000341394 FAM237BA0A1B0GVD1 139 aa10.83□□□□□ -0.68
CAPRIN1-201ENST00000341394 MSCO60682 206 aa10.83□□□□□ -0.68
CAPRIN1-201ENST00000341394 PDGFRAP16234 1089 aa10.83□□□□□ -0.68
CAPRIN1-201ENST00000341394 CDC42EP1Q00587 391 aa10.83□□□□□ -0.68
CAPRIN1-201ENST00000341394 SURF1Q15526 300 aa10.83□□□□□ -0.68
CAPRIN1-201ENST00000341394 MFSD7Q6UXD7 560 aa10.83□□□□□ -0.68
CAPRIN1-201ENST00000341394 NUP93Q8N1F7 819 aa10.83□□□□□ -0.68
CAPRIN1-201ENST00000341394 RBM41Q96IZ5 413 aaKnown RBP10.83□□□□□ -0.68
CAPRIN1-201ENST00000341394 TMEM120AQ9BXJ8 343 aa10.83□□□□□ -0.68
CAPRIN1-201ENST00000341394 CAAP1Q9H8G2 361 aa10.83□□□□□ -0.68
CAPRIN1-201ENST00000341394 UBP1Q9NZI7 540 aa10.83□□□□□ -0.68
CAPRIN1-201ENST00000341394 PSMC3IPQ9P2W1 217 aaPredicted RBP10.83□□□□□ -0.68
CAPRIN1-201ENST00000341394 C2CD2Q9Y426 696 aa10.83□□□□□ -0.68
CAPRIN1-201ENST00000341394 KPNA6O60684 536 aa10.82□□□□□ -0.68
CAPRIN1-201ENST00000341394 AVILO75366 819 aa10.82□□□□□ -0.68
CAPRIN1-201ENST00000341394 CDH8P55286 799 aa10.82□□□□□ -0.68
CAPRIN1-201ENST00000341394 OTUD4Q01804 1114 aaKnown RBP10.82□□□□□ -0.68
CAPRIN1-201ENST00000341394 SATB1Q01826 763 aa10.82□□□□□ -0.68
CAPRIN1-201ENST00000341394 NCOA4Q13772 614 aa10.82□□□□□ -0.68
CAPRIN1-201ENST00000341394 MARCH8Q5T0T0 291 aa10.82□□□□□ -0.68
CAPRIN1-201ENST00000341394 ATG16L1Q676U5 607 aa10.82□□□□□ -0.68
CAPRIN1-201ENST00000341394 NSL1Q96IY1 281 aa10.82□□□□□ -0.68
CAPRIN1-201ENST00000341394 CLIC5Q9NZA1 410 aa10.82□□□□□ -0.68
CAPRIN1-201ENST00000341394 MYADML2A6NDP7 307 aa10.82□□□□□ -0.68
CAPRIN1-201ENST00000341394 GIPC1O14908 333 aa10.82□□□□□ -0.68
CAPRIN1-201ENST00000341394 P4HA2O15460 535 aa10.82□□□□□ -0.68
CAPRIN1-201ENST00000341394 FAM189A1O60320 539 aa10.82□□□□□ -0.68
CAPRIN1-201ENST00000341394 F2P00734 622 aa10.82□□□□□ -0.68
CAPRIN1-201ENST00000341394 CXCL8P10145 99 aa10.82□□□□□ -0.68
CAPRIN1-201ENST00000341394 AVPR1AP37288 418 aa10.82□□□□□ -0.68
CAPRIN1-201ENST00000341394 PAPOLAP51003 745 aaKnown RBP10.82□□□□□ -0.68
CAPRIN1-201ENST00000341394 CDK17Q00537 523 aa10.82□□□□□ -0.68
CAPRIN1-201ENST00000341394 STX3Q13277 289 aa10.82□□□□□ -0.68
CAPRIN1-201ENST00000341394 PEX6Q13608 980 aa10.82□□□□□ -0.68
CAPRIN1-201ENST00000341394 PID1Q7Z2X4 250 aa10.82□□□□□ -0.68
CAPRIN1-201ENST00000341394 AGGF1Q8N302 714 aaeCLIP10.82□□□□□ -0.685e-6■□□□□ 10.5
CAPRIN1-201ENST00000341394 RFWD2Q8NHY2 731 aa10.82□□□□□ -0.68
CAPRIN1-201ENST00000341394 PAFAH2Q99487 392 aa10.82□□□□□ -0.68
CAPRIN1-201ENST00000341394 FAM53CQ9NYF3 392 aa10.82□□□□□ -0.68
CAPRIN1-201ENST00000341394 IL1RAPL1Q9NZN1 696 aa10.82□□□□□ -0.68
CAPRIN1-201ENST00000341394 BNIP3LO60238 219 aa10.82□□□□□ -0.68
CAPRIN1-201ENST00000341394 TSPAN3O60637 253 aa10.82□□□□□ -0.68
CAPRIN1-201ENST00000341394 RPS6KA5O75582 802 aa10.82□□□□□ -0.68
CAPRIN1-201ENST00000341394 NPTXRO95502 500 aa10.82□□□□□ -0.68
CAPRIN1-201ENST00000341394 HMGCRP04035 888 aa10.82□□□□□ -0.68
CAPRIN1-201ENST00000341394 PTDSS1P48651 473 aaKnown RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms