RNA–Protein interactions for RNA: ENST00000336349.5

SPTY2D1-201, Transcript of SPT2 chromatin protein domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTY2D1, Length 5,754 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTY2D1-201ENST00000336349 RNFT2Q96EX2 444 aa12.5□□□□□ -0.41
SPTY2D1-201ENST00000336349 YIPF2Q9BWQ6 316 aa12.5□□□□□ -0.41
SPTY2D1-201ENST00000336349 NCKIPSDQ9NZQ3 722 aa12.5□□□□□ -0.41
SPTY2D1-201ENST00000336349 WDR27A2RRH5 827 aa12.5□□□□□ -0.41
SPTY2D1-201ENST00000336349 VWA5AO00534 786 aa12.5□□□□□ -0.41
SPTY2D1-201ENST00000336349 TPD52L2O43399 206 aaKnown RBP12.5□□□□□ -0.41
SPTY2D1-201ENST00000336349 JCHAINP01591 159 aa12.5□□□□□ -0.41
SPTY2D1-201ENST00000336349 PSMC6P62333 389 aa12.5□□□□□ -0.41
SPTY2D1-201ENST00000336349 KRR1Q13601 381 aaKnown RBP12.5□□□□□ -0.41
SPTY2D1-201ENST00000336349 FASTKQ14296 549 aaKnown RBP12.5□□□□□ -0.41
SPTY2D1-201ENST00000336349 TRIM71Q2Q1W2 868 aaKnown RBP12.5□□□□□ -0.41
SPTY2D1-201ENST00000336349 RNF220Q5VTB9 566 aa12.5□□□□□ -0.41
SPTY2D1-201ENST00000336349 CENPTQ96BT3 561 aa12.5□□□□□ -0.41
SPTY2D1-201ENST00000336349 KATNAL1Q9BW62 490 aa12.5□□□□□ -0.41
SPTY2D1-201ENST00000336349 CROTQ9UKG9 612 aa12.5□□□□□ -0.41
SPTY2D1-201ENST00000336349 USP18Q9UMW8 372 aa12.5□□□□□ -0.41
SPTY2D1-201ENST00000336349 PLA2G4CQ9UP65 541 aa12.5□□□□□ -0.41
SPTY2D1-201ENST00000336349 TBX3O15119 743 aa12.49□□□□□ -0.41
SPTY2D1-201ENST00000336349 MED26O95402 600 aa12.49□□□□□ -0.41
SPTY2D1-201ENST00000336349 MLNP12872 115 aa12.49□□□□□ -0.41
SPTY2D1-201ENST00000336349 NR1D2Q14995 579 aa12.49□□□□□ -0.41
SPTY2D1-201ENST00000336349 CNGA2Q16280 664 aa12.49□□□□□ -0.41
SPTY2D1-201ENST00000336349 CHMP1BQ7LBR1 199 aa12.49□□□□□ -0.41
SPTY2D1-201ENST00000336349 HOMEZQ8IX15 550 aa12.49□□□□□ -0.41
SPTY2D1-201ENST00000336349 NACC2Q96BF6 587 aa12.49□□□□□ -0.41
SPTY2D1-201ENST00000336349 MMP19Q99542 508 aa12.49□□□□□ -0.41
SPTY2D1-201ENST00000336349 SEPT5Q99719 369 aaPredicted RBP12.49□□□□□ -0.41
SPTY2D1-201ENST00000336349 NRDE2Q9H7Z3 1164 aa12.49□□□□□ -0.41
SPTY2D1-201ENST00000336349 MRGBPQ9NV56 204 aa12.49□□□□□ -0.41
SPTY2D1-201ENST00000336349 MPP6Q9NZW5 540 aa12.49□□□□□ -0.41
SPTY2D1-201ENST00000336349 COL15A1P39059 1388 aa12.49□□□□□ -0.41
SPTY2D1-201ENST00000336349 RCCD1A6NED2 376 aa12.49□□□□□ -0.41
SPTY2D1-201ENST00000336349 MRASO14807 208 aa12.49□□□□□ -0.41
SPTY2D1-201ENST00000336349 TIMM44O43615 452 aa12.49□□□□□ -0.41
SPTY2D1-201ENST00000336349 BANF1O75531 89 aa12.49□□□□□ -0.41
SPTY2D1-201ENST00000336349 UNC5CO95185 931 aa12.49□□□□□ -0.41
SPTY2D1-201ENST00000336349 MSX2P35548 267 aaPredicted RBP12.49□□□□□ -0.41
SPTY2D1-201ENST00000336349 RAD23AP54725 363 aa12.49□□□□□ -0.41
SPTY2D1-201ENST00000336349 PDK3Q15120 406 aa12.49□□□□□ -0.41
SPTY2D1-201ENST00000336349 ZNF614Q8N883 585 aa12.49□□□□□ -0.41
SPTY2D1-201ENST00000336349 MAGEE2Q8TD90 523 aaPredicted RBP12.49□□□□□ -0.41
SPTY2D1-201ENST00000336349 FAM120BQ96EK7 910 aaKnown RBP12.49□□□□□ -0.41
SPTY2D1-201ENST00000336349 MASTLQ96GX5 879 aa12.49□□□□□ -0.41
SPTY2D1-201ENST00000336349 NSMCE2Q96MF7 247 aa12.49□□□□□ -0.41
SPTY2D1-201ENST00000336349 TBCDQ9BTW9 1192 aa12.49□□□□□ -0.41
SPTY2D1-201ENST00000336349 NMRK2Q9NPI5 230 aa12.49□□□□□ -0.41
SPTY2D1-201ENST00000336349 LIMD1Q9UGP4 676 aa12.49□□□□□ -0.41
SPTY2D1-201ENST00000336349 POLG2Q9UHN1 485 aa12.49□□□□□ -0.41
SPTY2D1-201ENST00000336349 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.49□□□□□ -0.41
SPTY2D1-201ENST00000336349 ABCB1P08183 1280 aaPredicted RBP12.49□□□□□ -0.41
SPTY2D1-201ENST00000336349 ACO1P21399 889 aaKnown RBP12.49□□□□□ -0.41
SPTY2D1-201ENST00000336349 FDFT1P37268 417 aa12.49□□□□□ -0.41
SPTY2D1-201ENST00000336349 CHN2P52757 468 aa12.49□□□□□ -0.41
SPTY2D1-201ENST00000336349 ROR2Q01974 943 aaKnown RBP12.49□□□□□ -0.41
SPTY2D1-201ENST00000336349 MTFR1Q15390 333 aa12.49□□□□□ -0.41
SPTY2D1-201ENST00000336349 NR6A1Q15406 480 aa12.49□□□□□ -0.41
SPTY2D1-201ENST00000336349 CARTPTQ16568 116 aa12.49□□□□□ -0.41
SPTY2D1-201ENST00000336349 TRIQKQ629K1 86 aa12.49□□□□□ -0.41
SPTY2D1-201ENST00000336349 C3orf67Q6ZVT6 689 aa12.49□□□□□ -0.41
SPTY2D1-201ENST00000336349 NT5DC3Q86UY8 548 aa12.49□□□□□ -0.41
SPTY2D1-201ENST00000336349 DHRSXQ8N5I4 330 aa12.49□□□□□ -0.41
SPTY2D1-201ENST00000336349 PPP1R10Q96QC0 940 aaKnown RBP12.49□□□□□ -0.41
SPTY2D1-201ENST00000336349 ACOX2Q99424 681 aa12.49□□□□□ -0.41
SPTY2D1-201ENST00000336349 LRRC40Q9H9A6 602 aa12.49□□□□□ -0.41
SPTY2D1-201ENST00000336349 ACP6Q9NPH0 428 aa12.49□□□□□ -0.41
SPTY2D1-201ENST00000336349 MRPL39Q9NYK5 338 aaKnown RBP12.49□□□□□ -0.41
SPTY2D1-201ENST00000336349 DDX3XO00571 662 aaKnown RBP eCLIP12.49□□□□□ -0.416e-8■■■■■ 29.2
SPTY2D1-201ENST00000336349 STX7O15400 261 aaKnown RBP12.49□□□□□ -0.41
SPTY2D1-201ENST00000336349 P4HA2O15460 535 aa12.49□□□□□ -0.41
SPTY2D1-201ENST00000336349 ALDH1A3P47895 512 aa12.49□□□□□ -0.41
SPTY2D1-201ENST00000336349 SERPINH1P50454 418 aaKnown RBP12.49□□□□□ -0.41
SPTY2D1-201ENST00000336349 NCF4Q15080 339 aa12.49□□□□□ -0.41
SPTY2D1-201ENST00000336349 PRAMEF18Q5VWM3 479 aa12.49□□□□□ -0.41
SPTY2D1-201ENST00000336349 SCARA3Q6AZY7 606 aa12.49□□□□□ -0.41
SPTY2D1-201ENST00000336349 DDX53Q86TM3 631 aaKnown RBP12.49□□□□□ -0.41
SPTY2D1-201ENST00000336349 RBM46Q8TBY0 533 aaKnown RBP12.49□□□□□ -0.41
SPTY2D1-201ENST00000336349 ENKURQ8TC29 256 aa12.49□□□□□ -0.41
SPTY2D1-201ENST00000336349 ZNF483Q8TF39 744 aaPredicted RBP12.49□□□□□ -0.41
SPTY2D1-201ENST00000336349 FOPNLQ96NB1 174 aa12.49□□□□□ -0.41
SPTY2D1-201ENST00000336349 CRLS1Q9UJA2 301 aa12.49□□□□□ -0.41
SPTY2D1-201ENST00000336349 KLHL20Q9Y2M5 609 aa12.49□□□□□ -0.41
SPTY2D1-201ENST00000336349 SH3BGRLO75368 114 aa12.49□□□□□ -0.41
SPTY2D1-201ENST00000336349 RGS2P41220 211 aa12.49□□□□□ -0.41
SPTY2D1-201ENST00000336349 GALK1P51570 392 aa12.49□□□□□ -0.41
SPTY2D1-201ENST00000336349 SRP54P61011 504 aaKnown RBP12.49□□□□□ -0.41
SPTY2D1-201ENST00000336349 SEPT12Q8IYM1 358 aa12.49□□□□□ -0.41
SPTY2D1-201ENST00000336349 FAM81AQ8TBF8 368 aa12.49□□□□□ -0.41
SPTY2D1-201ENST00000336349 SPPL2AQ8TCT8 520 aa12.49□□□□□ -0.41
SPTY2D1-201ENST00000336349 NUDT12Q9BQG2 462 aa12.49□□□□□ -0.41
SPTY2D1-201ENST00000336349 MXRA8Q9BRK3 442 aa12.49□□□□□ -0.41
SPTY2D1-201ENST00000336349 FAM192AQ9GZU8 254 aa12.49□□□□□ -0.41
SPTY2D1-201ENST00000336349 PARVBQ9HBI1 364 aa12.49□□□□□ -0.41
SPTY2D1-201ENST00000336349 ATP6V1HQ9UI12 483 aa12.49□□□□□ -0.41
SPTY2D1-201ENST00000336349 ADGBQ8N7X0 1667 aa12.48□□□□□ -0.41
SPTY2D1-201ENST00000336349 IGSF9BQ9UPX0 1349 aa12.48□□□□□ -0.41
SPTY2D1-201ENST00000336349 TRIM13O60858 407 aa12.48□□□□□ -0.41
SPTY2D1-201ENST00000336349 CAMTA2O94983 1202 aa12.48□□□□□ -0.41
SPTY2D1-201ENST00000336349 LDLRP01130 860 aa12.48□□□□□ -0.41
SPTY2D1-201ENST00000336349 XRCC4Q13426 336 aa12.48□□□□□ -0.41
SPTY2D1-201ENST00000336349 STILQ15468 1287 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms