RNA–Protein interactions for RNA: ENST00000328392.10

SKP1-201, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 5

Gene SKP1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-201ENST00000328392 ZNF668Q96K58 619 aaPredicted RBP4.55□□□□□ -1.68
SKP1-201ENST00000328392 PRR25Q96S07 402 aa4.55□□□□□ -1.68
SKP1-201ENST00000328392 FSCN3Q9NQT6 498 aa4.55□□□□□ -1.68
SKP1-201ENST00000328392 ASB6Q9NWX5 421 aa4.55□□□□□ -1.68
SKP1-201ENST00000328392 ASAP1Q9ULH1 1129 aa4.55□□□□□ -1.68
SKP1-201ENST00000328392 VPS4AQ9UN37 437 aa4.55□□□□□ -1.68
SKP1-201ENST00000328392 PCDHB2Q9Y5E7 798 aa4.55□□□□□ -1.68
SKP1-201ENST00000328392 FER1L4A9Z1Z3 1794 aa4.55□□□□□ -1.68
SKP1-201ENST00000328392 KIF28PB7ZC32 967 aa4.54□□□□□ -1.68
SKP1-201ENST00000328392 PPP6R2O75170 966 aa4.54□□□□□ -1.68
SKP1-201ENST00000328392 TAF5LO75529 589 aa4.54□□□□□ -1.68
SKP1-201ENST00000328392 TMEM225BP0DP42 221 aa4.54□□□□□ -1.68
SKP1-201ENST00000328392 VEGFAP15692 232 aaPredicted RBP4.54□□□□□ -1.68
SKP1-201ENST00000328392 CREB1P16220 341 aa4.54□□□□□ -1.68
SKP1-201ENST00000328392 ZNF37AP17032 561 aaPredicted RBP4.54□□□□□ -1.68
SKP1-201ENST00000328392 NDUFB7P17568 137 aa4.54□□□□□ -1.68
SKP1-201ENST00000328392 FBLP22087 321 aaKnown RBP4.54□□□□□ -1.68
SKP1-201ENST00000328392 HTR7P34969 479 aa4.54□□□□□ -1.68
SKP1-201ENST00000328392 TPTEP56180 551 aa4.54□□□□□ -1.68
SKP1-201ENST00000328392 EIF4A1P60842 406 aaKnown RBP4.54□□□□□ -1.68
SKP1-201ENST00000328392 TIAL1Q01085 375 aaKnown RBP eCLIP4.54□□□□□ -1.68
SKP1-201ENST00000328392 ATP1A4Q13733 1029 aa4.54□□□□□ -1.68
SKP1-201ENST00000328392 BMPR2Q13873 1038 aa4.54□□□□□ -1.68
SKP1-201ENST00000328392 RAPGEF1Q13905 1077 aa4.54□□□□□ -1.68
SKP1-201ENST00000328392 CYP1B1Q16678 543 aa4.54□□□□□ -1.68
SKP1-201ENST00000328392 L1TD1Q5T7N2 865 aaKnown RBP4.54□□□□□ -1.68
SKP1-201ENST00000328392 ZNF618Q5T7W0 954 aa4.54□□□□□ -1.68
SKP1-201ENST00000328392 KRTAP5-3Q6L8H2 238 aa4.54□□□□□ -1.68
SKP1-201ENST00000328392 TTC30AQ86WT1 665 aa4.54□□□□□ -1.68
SKP1-201ENST00000328392 MBD3L2Q8NHZ7 208 aaPredicted RBP4.54□□□□□ -1.68
SKP1-201ENST00000328392 SCAMP5Q8TAC9 235 aa4.54□□□□□ -1.68
SKP1-201ENST00000328392 CSGALNACT1Q8TDX6 532 aa4.54□□□□□ -1.68
SKP1-201ENST00000328392 ZNF384Q8TF68 577 aa4.54□□□□□ -1.68
SKP1-201ENST00000328392 SOCS4Q8WXH5 440 aa4.54□□□□□ -1.68
SKP1-201ENST00000328392 RFKQ969G6 155 aa4.54□□□□□ -1.68
SKP1-201ENST00000328392 RILPL2Q969X0 211 aa4.54□□□□□ -1.68
SKP1-201ENST00000328392 WDYHV1Q96HA8 205 aa4.54□□□□□ -1.68
SKP1-201ENST00000328392 EIF3CQ99613 913 aaKnown RBP4.54□□□□□ -1.68
SKP1-201ENST00000328392 KATNAL1Q9BW62 490 aa4.54□□□□□ -1.68
SKP1-201ENST00000328392 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.54□□□□□ -1.68
SKP1-201ENST00000328392 AGO4Q9HCK5 861 aaKnown RBP4.54□□□□□ -1.68
SKP1-201ENST00000328392 ARHGEF3Q9NR81 526 aa4.54□□□□□ -1.68
SKP1-201ENST00000328392 SEMA4GQ9NTN9 838 aa4.54□□□□□ -1.68
SKP1-201ENST00000328392 NKX1-2Q9UD57 310 aaPredicted RBP4.54□□□□□ -1.68
SKP1-201ENST00000328392 STEAP1Q9UHE8 339 aa4.54□□□□□ -1.68
SKP1-201ENST00000328392 DTNAQ9Y4J8 743 aa4.54□□□□□ -1.68
SKP1-201ENST00000328392 DGKBQ9Y6T7 804 aa4.54□□□□□ -1.68
SKP1-201ENST00000328392 MPPED1O15442 326 aa4.53□□□□□ -1.68
SKP1-201ENST00000328392 SPRY2O43597 315 aa4.53□□□□□ -1.68
SKP1-201ENST00000328392 KRT38O76015 456 aa4.53□□□□□ -1.68
SKP1-201ENST00000328392 ACTL6BO94805 426 aa4.53□□□□□ -1.68
SKP1-201ENST00000328392 WDR47O94967 919 aa4.53□□□□□ -1.68
SKP1-201ENST00000328392 CER1O95813 267 aa4.53□□□□□ -1.68
SKP1-201ENST00000328392 TTLL1O95922 423 aa4.53□□□□□ -1.68
SKP1-201ENST00000328392 ANXA6P08133 673 aa4.53□□□□□ -1.68
SKP1-201ENST00000328392 ITGA2BP08514 1039 aa4.53□□□□□ -1.68
SKP1-201ENST00000328392 ITGA5P08648 1049 aa4.53□□□□□ -1.68
SKP1-201ENST00000328392 ALADP13716 330 aa4.53□□□□□ -1.68
SKP1-201ENST00000328392 JUPP14923 745 aa4.53□□□□□ -1.68
SKP1-201ENST00000328392 FPR3P25089 353 aa4.53□□□□□ -1.68
SKP1-201ENST00000328392 CTGFP29279 349 aa4.53□□□□□ -1.68
SKP1-201ENST00000328392 MAPK9P45984 424 aa4.53□□□□□ -1.68
SKP1-201ENST00000328392 GSTM5P46439 218 aa4.53□□□□□ -1.68
SKP1-201ENST00000328392 C21orf58P58505 322 aa4.53□□□□□ -1.68
SKP1-201ENST00000328392 RNASELQ05823 741 aaKnown RBP4.53□□□□□ -1.68
SKP1-201ENST00000328392 DEUP1Q05D60 604 aa4.53□□□□□ -1.68
SKP1-201ENST00000328392 CCDC142Q17RM4 750 aa4.53□□□□□ -1.68
SKP1-201ENST00000328392 C4orf46Q504U0 113 aa4.53□□□□□ -1.68
SKP1-201ENST00000328392 TEDDM1Q5T9Z0 273 aa4.53□□□□□ -1.68
SKP1-201ENST00000328392 GRHL2Q6ISB3 625 aa4.53□□□□□ -1.68
SKP1-201ENST00000328392 KRT27Q7Z3Y8 459 aa4.53□□□□□ -1.68
SKP1-201ENST00000328392 KRT73Q86Y46 540 aa4.53□□□□□ -1.68
SKP1-201ENST00000328392 SUN3Q8TAQ9 357 aa4.53□□□□□ -1.68
SKP1-201ENST00000328392 TRAPPC12Q8WVT3 735 aa4.53□□□□□ -1.68
SKP1-201ENST00000328392 PRR11Q96HE9 360 aaPredicted RBP4.53□□□□□ -1.68
SKP1-201ENST00000328392 PBKQ96KB5 322 aa4.53□□□□□ -1.68
SKP1-201ENST00000328392 ALG8Q9BVK2 526 aa4.53□□□□□ -1.68
SKP1-201ENST00000328392 TMEM120AQ9BXJ8 343 aa4.53□□□□□ -1.68
SKP1-201ENST00000328392 TAF1DQ9H5J8 278 aaPredicted RBP4.53□□□□□ -1.68
SKP1-201ENST00000328392 HELLSQ9NRZ9 838 aa4.53□□□□□ -1.68
SKP1-201ENST00000328392 PCDHB7Q9Y5E2 793 aa4.53□□□□□ -1.68
SKP1-201ENST00000328392 KAT6AQ92794 2004 aa4.53□□□□□ -1.68
SKP1-201ENST00000328392 WDR27A2RRH5 827 aa4.52□□□□□ -1.69
SKP1-201ENST00000328392 QSOX1O00391 747 aa4.52□□□□□ -1.69
SKP1-201ENST00000328392 PMPCBO75439 489 aa4.52□□□□□ -1.69
SKP1-201ENST00000328392 RPP40O75818 363 aaKnown RBP4.52□□□□□ -1.69
SKP1-201ENST00000328392 URI1O94763 535 aaPredicted RBP4.52□□□□□ -1.69
SKP1-201ENST00000328392 NXPH3O95157 252 aa4.52□□□□□ -1.69
SKP1-201ENST00000328392 NTSR2O95665 410 aa4.52□□□□□ -1.69
SKP1-201ENST00000328392 DHRS4L1P0CG22 281 aa4.52□□□□□ -1.69
SKP1-201ENST00000328392 CD19P15391 556 aa4.52□□□□□ -1.69
SKP1-201ENST00000328392 SLC5A2P31639 672 aa4.52□□□□□ -1.69
SKP1-201ENST00000328392 GKP32189 559 aa4.52□□□□□ -1.69
SKP1-201ENST00000328392 GRIA3P42263 894 aa4.52□□□□□ -1.69
SKP1-201ENST00000328392 PNLIPRP1P54315 467 aa4.52□□□□□ -1.69
SKP1-201ENST00000328392 PRKAA2P54646 552 aa4.52□□□□□ -1.69
SKP1-201ENST00000328392 ELLP55199 621 aaPredicted RBP4.52□□□□□ -1.69
SKP1-201ENST00000328392 MRPS21P82921 87 aaKnown RBP4.52□□□□□ -1.69
SKP1-201ENST00000328392 CUL4BQ13620 913 aa4.52□□□□□ -1.69
SKP1-201ENST00000328392 PTPRRQ15256 657 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms