RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 PSMC1P62191 440 aaKnown RBP18.52■□□□□ 0.55
PRKCB-202ENST00000321728 TUBB3Q13509 450 aa18.52■□□□□ 0.55
PRKCB-202ENST00000321728 TAZQ16635 292 aa18.52■□□□□ 0.55
PRKCB-202ENST00000321728 SWSAP1Q6NVH7 229 aa18.52■□□□□ 0.55
PRKCB-202ENST00000321728 C1orf228Q6PIY5 440 aa18.52■□□□□ 0.55
PRKCB-202ENST00000321728 B3GNT6Q6ZMB0 384 aa18.52■□□□□ 0.55
PRKCB-202ENST00000321728 SCARA5Q6ZMJ2 495 aa18.52■□□□□ 0.55
PRKCB-202ENST00000321728 ARCQ7LC44 396 aa18.52■□□□□ 0.55
PRKCB-202ENST00000321728 ACTRT2Q8TDY3 377 aa18.52■□□□□ 0.55
PRKCB-202ENST00000321728 TRIM56Q9BRZ2 755 aaKnown RBP18.52■□□□□ 0.55
PRKCB-202ENST00000321728 POPDC2Q9HBU9 364 aa18.52■□□□□ 0.55
PRKCB-202ENST00000321728 VILLO15195 856 aa18.51■□□□□ 0.55
PRKCB-202ENST00000321728 APRTP07741 180 aa18.51■□□□□ 0.55
PRKCB-202ENST00000321728 SMIM18P0DKX4 95 aa18.51■□□□□ 0.55
PRKCB-202ENST00000321728 NCF2P19878 526 aaPredicted RBP18.51■□□□□ 0.55
PRKCB-202ENST00000321728 EIF4BP23588 611 aaKnown RBP18.51■□□□□ 0.55
PRKCB-202ENST00000321728 TLR1Q15399 786 aa18.51■□□□□ 0.55
PRKCB-202ENST00000321728 PTPN20Q4JDL3 420 aa18.51■□□□□ 0.55
PRKCB-202ENST00000321728 C16orf46Q6P387 395 aa18.51■□□□□ 0.55
PRKCB-202ENST00000321728 PGM2L1Q6PCE3 622 aa18.51■□□□□ 0.55
PRKCB-202ENST00000321728 TMC7Q7Z402 723 aa18.51■□□□□ 0.55
PRKCB-202ENST00000321728 CCDC33Q8N5R6 958 aa18.51■□□□□ 0.55
PRKCB-202ENST00000321728 PRICKLE1Q96MT3 831 aaPredicted RBP18.51■□□□□ 0.55
PRKCB-202ENST00000321728 ZNF778Q96MU6 729 aa18.51■□□□□ 0.55
PRKCB-202ENST00000321728 RMDN3Q96TC7 470 aa18.51■□□□□ 0.55
PRKCB-202ENST00000321728 EPB41L1Q9H4G0 881 aa18.51■□□□□ 0.55
PRKCB-202ENST00000321728 HSFX1Q9UBD0 423 aa18.51■□□□□ 0.55
PRKCB-202ENST00000321728 COL11A2P13942 1736 aaPredicted RBP18.51■□□□□ 0.55
PRKCB-202ENST00000321728 H0YCG3 227 aa18.51■□□□□ 0.55
PRKCB-202ENST00000321728 TRDMT1O14717 391 aaKnown RBP18.51■□□□□ 0.55
PRKCB-202ENST00000321728 APOEP02649 317 aa18.51■□□□□ 0.55
PRKCB-202ENST00000321728 PRKCHP24723 683 aa18.51■□□□□ 0.55
PRKCB-202ENST00000321728 PMLP29590 882 aa18.51■□□□□ 0.55
PRKCB-202ENST00000321728 MIPP30301 263 aa18.51■□□□□ 0.55
PRKCB-202ENST00000321728 POLR2BP30876 1174 aaKnown RBP18.51■□□□□ 0.55
PRKCB-202ENST00000321728 FDFT1P37268 417 aa18.51■□□□□ 0.55
PRKCB-202ENST00000321728 CAP2P40123 477 aa18.51■□□□□ 0.55
PRKCB-202ENST00000321728 RPS6P62753 249 aaKnown RBP18.51■□□□□ 0.55
PRKCB-202ENST00000321728 RPL10AP62906 217 aaKnown RBP18.51■□□□□ 0.55
PRKCB-202ENST00000321728 DENND1BQ6P3S1 775 aa18.51■□□□□ 0.55
PRKCB-202ENST00000321728 ATP6V0A1Q93050 837 aa18.51■□□□□ 0.55
PRKCB-202ENST00000321728 BTBD9Q96Q07 612 aa18.51■□□□□ 0.55
PRKCB-202ENST00000321728 TARS2Q9BW92 718 aaKnown RBP18.51■□□□□ 0.55
PRKCB-202ENST00000321728 ITGA11Q9UKX5 1188 aa18.51■□□□□ 0.55
PRKCB-202ENST00000321728 KCNN4O15554 427 aa18.5■□□□□ 0.55
PRKCB-202ENST00000321728 PLA2G6O60733 806 aa18.5■□□□□ 0.55
PRKCB-202ENST00000321728 ZMPSTE24O75844 475 aa18.5■□□□□ 0.55
PRKCB-202ENST00000321728 ATP6V1B1P15313 513 aa18.5■□□□□ 0.55
PRKCB-202ENST00000321728 CD19P15391 556 aa18.5■□□□□ 0.55
PRKCB-202ENST00000321728 KCNA4P22459 653 aa18.5■□□□□ 0.55
PRKCB-202ENST00000321728 ALDH1A3P47895 512 aa18.5■□□□□ 0.55
PRKCB-202ENST00000321728 SLC1A6P48664 564 aa18.5■□□□□ 0.55
PRKCB-202ENST00000321728 MTERF2Q49AM1 385 aa18.5■□□□□ 0.55
PRKCB-202ENST00000321728 TMEM259Q4ZIN3 620 aa18.5■□□□□ 0.55
PRKCB-202ENST00000321728 TRMT10BQ6PF06 316 aaKnown RBP18.5■□□□□ 0.55
PRKCB-202ENST00000321728 KLHDC10Q6PID8 442 aa18.5■□□□□ 0.55
PRKCB-202ENST00000321728 ADGRF2Q8IZF7 708 aa18.5■□□□□ 0.55
PRKCB-202ENST00000321728 APBB2Q92870 758 aa18.5■□□□□ 0.55
PRKCB-202ENST00000321728 IFT122Q9HBG6 1241 aa18.5■□□□□ 0.55
PRKCB-202ENST00000321728 MKS1Q9NXB0 559 aa18.5■□□□□ 0.55
PRKCB-202ENST00000321728 SF3B1O75533 1304 aaKnown RBP eCLIP18.5■□□□□ 0.553e-6■■■■■ 63.8
PRKCB-202ENST00000321728 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.5■□□□□ 0.55
PRKCB-202ENST00000321728 LRRIQ4A6NIV6 560 aa18.5■□□□□ 0.55
PRKCB-202ENST00000321728 MYL6P60660 151 aa18.5■□□□□ 0.55
PRKCB-202ENST00000321728 TBL3Q12788 808 aaKnown RBP18.5■□□□□ 0.55
PRKCB-202ENST00000321728 RTKN2Q8IZC4 609 aa18.5■□□□□ 0.55
PRKCB-202ENST00000321728 UBR7Q8N806 425 aa18.5■□□□□ 0.55
PRKCB-202ENST00000321728 TMEM143Q96AN5 459 aa18.5■□□□□ 0.55
PRKCB-202ENST00000321728 CMTM5Q96DZ9 223 aa18.5■□□□□ 0.55
PRKCB-202ENST00000321728 SIKE1Q9BRV8 207 aa18.5■□□□□ 0.55
PRKCB-202ENST00000321728 ZNF341Q9BYN7 854 aa18.5■□□□□ 0.55
PRKCB-202ENST00000321728 RSAD1Q9HA92 442 aa18.5■□□□□ 0.55
PRKCB-202ENST00000321728 CYP26B1Q9NR63 512 aa18.5■□□□□ 0.55
PRKCB-202ENST00000321728 LZTS1Q9Y250 596 aa18.5■□□□□ 0.55
PRKCB-202ENST00000321728 K7ERI5 159 aa18.49■□□□□ 0.55
PRKCB-202ENST00000321728 ASS1P00966 412 aaKnown RBP18.49■□□□□ 0.55
PRKCB-202ENST00000321728 TFAP2AP05549 437 aa18.49■□□□□ 0.55
PRKCB-202ENST00000321728 PTGER2P43116 358 aa18.49■□□□□ 0.55
PRKCB-202ENST00000321728 NOMO1Q15155 1222 aa18.49■□□□□ 0.55
PRKCB-202ENST00000321728 UNC5AQ6ZN44 842 aa18.49■□□□□ 0.55
PRKCB-202ENST00000321728 CAND1Q86VP6 1230 aaKnown RBP18.49■□□□□ 0.55
PRKCB-202ENST00000321728 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.49■□□□□ 0.55
PRKCB-202ENST00000321728 GRIP2Q9C0E4 1043 aa18.49■□□□□ 0.55
PRKCB-202ENST00000321728 PLAC1Q9HBJ0 212 aa18.49■□□□□ 0.55
PRKCB-202ENST00000321728 PAK5Q9P286 719 aa18.49■□□□□ 0.55
PRKCB-202ENST00000321728 FBXO40Q9UH90 709 aa18.49■□□□□ 0.55
PRKCB-202ENST00000321728 HMX2A2RU54 273 aa18.49■□□□□ 0.55
PRKCB-202ENST00000321728 AP1G1O43747 822 aa18.49■□□□□ 0.55
PRKCB-202ENST00000321728 ADCY3O60266 1144 aa18.49■□□□□ 0.55
PRKCB-202ENST00000321728 LDHAP00338 332 aaKnown RBP18.49■□□□□ 0.55
PRKCB-202ENST00000321728 ITGAXP20702 1163 aa18.49■□□□□ 0.55
PRKCB-202ENST00000321728 CDH6P55285 790 aa18.49■□□□□ 0.55
PRKCB-202ENST00000321728 CNGA3Q16281 694 aa18.49■□□□□ 0.55
PRKCB-202ENST00000321728 NADK2Q4G0N4 442 aa18.49■□□□□ 0.55
PRKCB-202ENST00000321728 ARHGEF16Q5VV41 709 aa18.49■□□□□ 0.55
PRKCB-202ENST00000321728 PDPK2PQ6A1A2 396 aa18.49■□□□□ 0.55
PRKCB-202ENST00000321728 SLFN12LQ6IEE8 588 aa18.49■□□□□ 0.55
PRKCB-202ENST00000321728 FBXW8Q8N3Y1 598 aa18.49■□□□□ 0.55
PRKCB-202ENST00000321728 CMASQ8NFW8 434 aaPredicted RBP18.49■□□□□ 0.55
PRKCB-202ENST00000321728 DEPDC1BQ8WUY9 529 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms