RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 CDC42EP4Q9H3Q1 356 aaKnown RBP17.35■□□□□ 0.37
SMCHD1-201ENST00000320876 MAN1C1Q9NR34 630 aa17.35■□□□□ 0.37
SMCHD1-201ENST00000320876 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.35■□□□□ 0.374e-6■■■□□ 17.4
SMCHD1-201ENST00000320876 RAD51BO15315 384 aa17.35■□□□□ 0.37
SMCHD1-201ENST00000320876 ATF7IP2Q5U623 682 aa17.35■□□□□ 0.37
SMCHD1-201ENST00000320876 BTBD3Q9Y2F9 522 aa17.35■□□□□ 0.37
SMCHD1-201ENST00000320876 STX11O75558 287 aa17.35■□□□□ 0.37
SMCHD1-201ENST00000320876 HPGDP15428 266 aa17.35■□□□□ 0.37
SMCHD1-201ENST00000320876 TTKP33981 857 aa17.35■□□□□ 0.37
SMCHD1-201ENST00000320876 VN1R5Q7Z5H4 357 aa17.35■□□□□ 0.37
SMCHD1-201ENST00000320876 SLC26A11Q86WA9 606 aa17.35■□□□□ 0.37
SMCHD1-201ENST00000320876 POLRMTO00411 1230 aaKnown RBP17.35■□□□□ 0.37
SMCHD1-201ENST00000320876 TSPAN9O75954 239 aa17.35■□□□□ 0.37
SMCHD1-201ENST00000320876 BMP10O95393 424 aa17.35■□□□□ 0.37
SMCHD1-201ENST00000320876 FXR2P51116 673 aaKnown RBP eCLIP17.35■□□□□ 0.371e-6■■■■□ 20.4
SMCHD1-201ENST00000320876 STK4Q13043 487 aa17.35■□□□□ 0.37
SMCHD1-201ENST00000320876 C11orf63Q6NUN7 778 aa17.35■□□□□ 0.37
SMCHD1-201ENST00000320876 THAP2Q9H0W7 228 aa17.35■□□□□ 0.37
SMCHD1-201ENST00000320876 COPS7BQ9H9Q2 264 aaPredicted RBP17.35■□□□□ 0.37
SMCHD1-201ENST00000320876 CHST12Q9NRB3 414 aa17.35■□□□□ 0.37
SMCHD1-201ENST00000320876 RGS20O76081 388 aa17.35■□□□□ 0.37
SMCHD1-201ENST00000320876 GRK4P32298 578 aa17.35■□□□□ 0.37
SMCHD1-201ENST00000320876 OXNAD1Q96HP4 312 aaPredicted RBP17.35■□□□□ 0.37
SMCHD1-201ENST00000320876 LRRC40Q9H9A6 602 aa17.35■□□□□ 0.37
SMCHD1-201ENST00000320876 MYH13Q9UKX3 1938 aa17.35■□□□□ 0.37
SMCHD1-201ENST00000320876 CCDC154A6NI56 674 aa17.34■□□□□ 0.37
SMCHD1-201ENST00000320876 PAX7P23759 505 aa17.34■□□□□ 0.37
SMCHD1-201ENST00000320876 GEMP55040 296 aa17.34■□□□□ 0.37
SMCHD1-201ENST00000320876 CUL2Q13617 745 aa17.34■□□□□ 0.37
SMCHD1-201ENST00000320876 EXOC3L1Q86VI1 746 aa17.34■□□□□ 0.37
SMCHD1-201ENST00000320876 TRIM48Q8IWZ4 208 aa17.34■□□□□ 0.37
SMCHD1-201ENST00000320876 DCUN1D5Q9BTE7 237 aa17.34■□□□□ 0.37
SMCHD1-201ENST00000320876 WDCPQ9H6R7 721 aa17.34■□□□□ 0.37
SMCHD1-201ENST00000320876 COL15A1P39059 1388 aa17.34■□□□□ 0.37
SMCHD1-201ENST00000320876 NFICP08651 508 aa17.34■□□□□ 0.37
SMCHD1-201ENST00000320876 TPBGLP0DKB5 382 aa17.34■□□□□ 0.37
SMCHD1-201ENST00000320876 PRKAA2P54646 552 aa17.34■□□□□ 0.37
SMCHD1-201ENST00000320876 SUSD4Q5VX71 490 aa17.34■□□□□ 0.37
SMCHD1-201ENST00000320876 SYTL1Q8IYJ3 562 aa17.34■□□□□ 0.37
SMCHD1-201ENST00000320876 ATXN2LQ8WWM7 1075 aaKnown RBP17.34■□□□□ 0.37
SMCHD1-201ENST00000320876 CLPBQ9H078 707 aa17.34■□□□□ 0.37
SMCHD1-201ENST00000320876 GPRC5DQ9NZD1 345 aa17.34■□□□□ 0.37
SMCHD1-201ENST00000320876 CDH18Q13634 790 aa17.34■□□□□ 0.37
SMCHD1-201ENST00000320876 MACC1Q6ZN28 852 aa17.34■□□□□ 0.37
SMCHD1-201ENST00000320876 TRPC4APQ8TEL6 797 aa17.34■□□□□ 0.37
SMCHD1-201ENST00000320876 CHD1O14646 1710 aa17.34■□□□□ 0.37
SMCHD1-201ENST00000320876 ERBB3P21860 1342 aa17.34■□□□□ 0.37
SMCHD1-201ENST00000320876 CYP2C8P10632 490 aa17.34■□□□□ 0.37
SMCHD1-201ENST00000320876 REXO1L1PQ8IX06 675 aa17.34■□□□□ 0.37
SMCHD1-201ENST00000320876 FIG4Q92562 907 aa17.34■□□□□ 0.37
SMCHD1-201ENST00000320876 NAGPAQ9UK23 515 aa17.34■□□□□ 0.37
SMCHD1-201ENST00000320876 ZNF609O15014 1411 aa17.34■□□□□ 0.37
SMCHD1-201ENST00000320876 A0A0A6YYK5 440 aaPredicted RBP17.34■□□□□ 0.37
SMCHD1-201ENST00000320876 FAM47E-STBD1D6RA91 191 aa17.34■□□□□ 0.37
SMCHD1-201ENST00000320876 PAICSP22234 425 aaKnown RBP17.34■□□□□ 0.37
SMCHD1-201ENST00000320876 IFNGR2P38484 337 aa17.34■□□□□ 0.37
SMCHD1-201ENST00000320876 TGM3Q08188 693 aa17.34■□□□□ 0.37
SMCHD1-201ENST00000320876 MYBPC2Q14324 1141 aa17.34■□□□□ 0.37
SMCHD1-201ENST00000320876 AGKQ53H12 422 aa17.34■□□□□ 0.37
SMCHD1-201ENST00000320876 DLG3Q92796 817 aa17.34■□□□□ 0.37
SMCHD1-201ENST00000320876 VANGL2Q9ULK5 521 aa17.34■□□□□ 0.37
SMCHD1-201ENST00000320876 AHCYL1O43865 530 aa17.34■□□□□ 0.37
SMCHD1-201ENST00000320876 SLITRK1Q96PX8 696 aa17.34■□□□□ 0.37
SMCHD1-201ENST00000320876 SEPT5Q99719 369 aaPredicted RBP17.34■□□□□ 0.37
SMCHD1-201ENST00000320876 PLAGL2Q9UPG8 496 aa17.34■□□□□ 0.37
SMCHD1-201ENST00000320876 CRTAMO95727 393 aa17.34■□□□□ 0.37
SMCHD1-201ENST00000320876 GLRBP48167 497 aa17.34■□□□□ 0.37
SMCHD1-201ENST00000320876 NOTUMQ6P988 496 aa17.34■□□□□ 0.37
SMCHD1-201ENST00000320876 FAM228AQ86W67 206 aa17.34■□□□□ 0.37
SMCHD1-201ENST00000320876 EXD1Q8NHP7 514 aa17.34■□□□□ 0.37
SMCHD1-201ENST00000320876 USP18Q9UMW8 372 aa17.34■□□□□ 0.37
SMCHD1-201ENST00000320876 OR6J1Q8NGC5 347 aa17.33■□□□□ 0.37
SMCHD1-201ENST00000320876 ZNF668Q96K58 619 aaPredicted RBP17.33■□□□□ 0.37
SMCHD1-201ENST00000320876 MCM8Q9UJA3 840 aa17.33■□□□□ 0.37
SMCHD1-201ENST00000320876 SLC25A13Q9UJS0 675 aa17.33■□□□□ 0.37
SMCHD1-201ENST00000320876 MAGEB16A2A368 324 aa17.33■□□□□ 0.37
SMCHD1-201ENST00000320876 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.33■□□□□ 0.37
SMCHD1-201ENST00000320876 LPAR1Q92633 364 aa17.33■□□□□ 0.37
SMCHD1-201ENST00000320876 SGF29Q96ES7 293 aa17.33■□□□□ 0.37
SMCHD1-201ENST00000320876 PDCD10Q9BUL8 212 aa17.33■□□□□ 0.37
SMCHD1-201ENST00000320876 HNMTP50135 292 aa17.33■□□□□ 0.37
SMCHD1-201ENST00000320876 IER5Q5VY09 327 aa17.33■□□□□ 0.37
SMCHD1-201ENST00000320876 CDK20Q8IZL9 346 aa17.33■□□□□ 0.37
SMCHD1-201ENST00000320876 SNX8Q9Y5X2 465 aa17.33■□□□□ 0.37
SMCHD1-201ENST00000320876 PLIN5Q00G26 463 aa17.33■□□□□ 0.36
SMCHD1-201ENST00000320876 LDHDQ86WU2 507 aa17.33■□□□□ 0.36
SMCHD1-201ENST00000320876 C2orf69Q8N8R5 385 aa17.33■□□□□ 0.36
SMCHD1-201ENST00000320876 INPP4BO15327 924 aa17.33■□□□□ 0.36
SMCHD1-201ENST00000320876 CCNA2P20248 432 aa17.33■□□□□ 0.36
SMCHD1-201ENST00000320876 PON1P27169 355 aa17.33■□□□□ 0.36
SMCHD1-201ENST00000320876 PUDPQ08623 228 aa17.33■□□□□ 0.36
SMCHD1-201ENST00000320876 FAM120BQ96EK7 910 aaKnown RBP17.33■□□□□ 0.36
SMCHD1-201ENST00000320876 ATP6V1HQ9UI12 483 aa17.33■□□□□ 0.36
SMCHD1-201ENST00000320876 ABCA9Q8IUA7 1624 aa17.33■□□□□ 0.36
SMCHD1-201ENST00000320876 NCAM2O15394 837 aa17.33■□□□□ 0.36
SMCHD1-201ENST00000320876 RPS6KA5O75582 802 aa17.33■□□□□ 0.36
SMCHD1-201ENST00000320876 LDLRP01130 860 aa17.33■□□□□ 0.36
SMCHD1-201ENST00000320876 SAMD4BQ5PRF9 694 aaKnown RBP17.33■□□□□ 0.36
SMCHD1-201ENST00000320876 MFSD4BQ5TF39 518 aa17.33■□□□□ 0.36
SMCHD1-201ENST00000320876 ZNF438Q7Z4V0 828 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms