RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 LDLRAP1Q5SW96 308 aa7.78□□□□□ -1.16
CDHR3-201ENST00000317716 DCAF15Q66K64 600 aa7.78□□□□□ -1.16
CDHR3-201ENST00000317716 PATL1Q86TB9 770 aaKnown RBP7.78□□□□□ -1.16
CDHR3-201ENST00000317716 SLC26A11Q86WA9 606 aa7.78□□□□□ -1.16
CDHR3-201ENST00000317716 APLFQ8IW19 511 aaPredicted RBP7.78□□□□□ -1.16
CDHR3-201ENST00000317716 KBTBD2Q8IY47 623 aa7.78□□□□□ -1.16
CDHR3-201ENST00000317716 TNS4Q8IZW8 715 aa7.78□□□□□ -1.16
CDHR3-201ENST00000317716 SNX31Q8N9S9 440 aa7.78□□□□□ -1.16
CDHR3-201ENST00000317716 DDHD1Q8NEL9 900 aa7.78□□□□□ -1.16
CDHR3-201ENST00000317716 ATP6V0A1Q93050 837 aa7.78□□□□□ -1.16
CDHR3-201ENST00000317716 SLC7A6OSQ96CW6 309 aaPredicted RBP7.78□□□□□ -1.16
CDHR3-201ENST00000317716 ZDHHC15Q96MV8 337 aa7.78□□□□□ -1.16
CDHR3-201ENST00000317716 FAM210AQ96ND0 272 aa7.78□□□□□ -1.16
CDHR3-201ENST00000317716 NDEL1Q9GZM8 345 aa7.78□□□□□ -1.16
CDHR3-201ENST00000317716 EPB41L4BQ9H329 900 aa7.78□□□□□ -1.16
CDHR3-201ENST00000317716 KCNH7Q9NS40 1196 aa7.78□□□□□ -1.16
CDHR3-201ENST00000317716 PNPOQ9NVS9 261 aa7.78□□□□□ -1.16
CDHR3-201ENST00000317716 SLC7A8Q9UHI5 535 aa7.78□□□□□ -1.16
CDHR3-201ENST00000317716 AP4B1Q9Y6B7 739 aa7.78□□□□□ -1.16
CDHR3-201ENST00000317716 ADGRA3Q8IWK6 1321 aa7.78□□□□□ -1.16
CDHR3-201ENST00000317716 TNS1Q9HBL0 1735 aaKnown RBP7.78□□□□□ -1.16
CDHR3-201ENST00000317716 TCF4P15884 667 aa7.78□□□□□ -1.16
CDHR3-201ENST00000317716 HOXA7P31268 230 aaPredicted RBP7.78□□□□□ -1.16
CDHR3-201ENST00000317716 ACTR2P61160 394 aa7.78□□□□□ -1.16
CDHR3-201ENST00000317716 ARMCX6Q7L4S7 300 aa7.78□□□□□ -1.16
CDHR3-201ENST00000317716 PID1Q7Z2X4 250 aa7.78□□□□□ -1.16
CDHR3-201ENST00000317716 GPR141Q7Z602 305 aa7.78□□□□□ -1.16
CDHR3-201ENST00000317716 AFAP1L2Q8N4X5 818 aa7.78□□□□□ -1.16
CDHR3-201ENST00000317716 C2orf69Q8N8R5 385 aa7.78□□□□□ -1.16
CDHR3-201ENST00000317716 EXD1Q8NHP7 514 aa7.78□□□□□ -1.16
CDHR3-201ENST00000317716 ZBTB45Q96K62 511 aaPredicted RBP7.78□□□□□ -1.16
CDHR3-201ENST00000317716 CNDP1Q96KN2 507 aa7.78□□□□□ -1.16
CDHR3-201ENST00000317716 SLC39A10Q9ULF5 831 aa7.78□□□□□ -1.16
CDHR3-201ENST00000317716 UMODL1Q5DID0 1318 aa7.78□□□□□ -1.16
CDHR3-201ENST00000317716 BOLA2-SMG1P6H3BVE0 249 aa7.78□□□□□ -1.16
CDHR3-201ENST00000317716 TM9SF1O15321 606 aa7.78□□□□□ -1.16
CDHR3-201ENST00000317716 USP12O75317 370 aa7.78□□□□□ -1.16
CDHR3-201ENST00000317716 OCM2P0CE71 109 aa7.78□□□□□ -1.16
CDHR3-201ENST00000317716 OCMP0CE72 109 aaPredicted RBP7.78□□□□□ -1.16
CDHR3-201ENST00000317716 RPL22P35268 128 aaKnown RBP7.78□□□□□ -1.16
CDHR3-201ENST00000317716 OCA2Q04671 838 aa7.78□□□□□ -1.16
CDHR3-201ENST00000317716 GABPAQ06546 454 aa7.78□□□□□ -1.16
CDHR3-201ENST00000317716 MMRN1Q13201 1228 aa7.78□□□□□ -1.16
CDHR3-201ENST00000317716 DRAXINQ8NBI3 349 aaPredicted RBP7.78□□□□□ -1.16
CDHR3-201ENST00000317716 FBXO27Q8NI29 283 aa7.78□□□□□ -1.16
CDHR3-201ENST00000317716 DCAF4Q8WV16 495 aa7.78□□□□□ -1.16
CDHR3-201ENST00000317716 ITFG2Q969R8 447 aa7.78□□□□□ -1.16
CDHR3-201ENST00000317716 ZNF669Q96BR6 464 aaPredicted RBP7.78□□□□□ -1.16
CDHR3-201ENST00000317716 RRN3Q9NYV6 651 aa7.78□□□□□ -1.16
CDHR3-201ENST00000317716 LMCD1Q9NZU5 365 aa7.78□□□□□ -1.16
CDHR3-201ENST00000317716 SELENONQ9NZV5 590 aa7.78□□□□□ -1.16
CDHR3-201ENST00000317716 SH3BP1Q9Y3L3 701 aa7.78□□□□□ -1.16
CDHR3-201ENST00000317716 PAPPAQ13219 1627 aa7.78□□□□□ -1.16
CDHR3-201ENST00000317716 CENPFP49454 3210 aa7.77□□□□□ -1.16
CDHR3-201ENST00000317716 A6NHS1 94 aa7.77□□□□□ -1.17
CDHR3-201ENST00000317716 LIASO43766 372 aa7.77□□□□□ -1.17
CDHR3-201ENST00000317716 RNASEH1O60930 286 aaKnown RBP7.77□□□□□ -1.17
CDHR3-201ENST00000317716 NPTX2P47972 431 aa7.77□□□□□ -1.17
CDHR3-201ENST00000317716 SLC1A6P48664 564 aa7.77□□□□□ -1.17
CDHR3-201ENST00000317716 GTF2A2P52657 109 aa7.77□□□□□ -1.17
CDHR3-201ENST00000317716 JAM2P57087 298 aa7.77□□□□□ -1.17
CDHR3-201ENST00000317716 ZBTB17Q13105 803 aa7.77□□□□□ -1.17
CDHR3-201ENST00000317716 ITGADQ13349 1161 aa7.77□□□□□ -1.17
CDHR3-201ENST00000317716 PDAP1Q13442 181 aaKnown RBP7.77□□□□□ -1.17
CDHR3-201ENST00000317716 GALNTL6Q49A17 601 aa7.77□□□□□ -1.17
CDHR3-201ENST00000317716 ZNF667Q5HYK9 610 aa7.77□□□□□ -1.17
CDHR3-201ENST00000317716 FNBP1LQ5T0N5 605 aa7.77□□□□□ -1.17
CDHR3-201ENST00000317716 OLFML1Q6UWY5 402 aa7.77□□□□□ -1.17
CDHR3-201ENST00000317716 BNC2Q6ZN30 1099 aaPredicted RBP7.77□□□□□ -1.17
CDHR3-201ENST00000317716 UNC45BQ8IWX7 931 aa7.77□□□□□ -1.17
CDHR3-201ENST00000317716 BHLHE22Q8NFJ8 381 aaPredicted RBP7.77□□□□□ -1.17
CDHR3-201ENST00000317716 USP33Q8TEY7 942 aa7.77□□□□□ -1.17
CDHR3-201ENST00000317716 GRID1Q9ULK0 1009 aa7.77□□□□□ -1.17
CDHR3-201ENST00000317716 TBX20Q9UMR3 447 aa7.77□□□□□ -1.17
CDHR3-201ENST00000317716 COL5A3P25940 1745 aaPredicted RBP7.77□□□□□ -1.17
CDHR3-201ENST00000317716 FZD9O00144 591 aa7.77□□□□□ -1.17
CDHR3-201ENST00000317716 PSTPIP1O43586 416 aa7.77□□□□□ -1.17
CDHR3-201ENST00000317716 RALBP11234 206 aa7.77□□□□□ -1.17
CDHR3-201ENST00000317716 CCNB1P14635 433 aa7.77□□□□□ -1.17
CDHR3-201ENST00000317716 MAGP20916 626 aa7.77□□□□□ -1.17
CDHR3-201ENST00000317716 ARL4AP40617 200 aa7.77□□□□□ -1.17
CDHR3-201ENST00000317716 RPL5P46777 297 aaKnown RBP7.77□□□□□ -1.17
CDHR3-201ENST00000317716 TRAF2Q12933 501 aa7.77□□□□□ -1.17
CDHR3-201ENST00000317716 CGB2Q6NT52 195 aa7.77□□□□□ -1.17
CDHR3-201ENST00000317716 SAPCD2Q86UD0 394 aa7.77□□□□□ -1.17
CDHR3-201ENST00000317716 SPC25Q9HBM1 224 aa7.77□□□□□ -1.17
CDHR3-201ENST00000317716 AAASQ9NRG9 546 aa7.77□□□□□ -1.17
CDHR3-201ENST00000317716 FRMPD4Q14CM0 1322 aa7.77□□□□□ -1.17
CDHR3-201ENST00000317716 MYH2Q9UKX2 1941 aa7.77□□□□□ -1.17
CDHR3-201ENST00000317716 TCRBV9S1A1TA0A576 114 aa7.77□□□□□ -1.17
CDHR3-201ENST00000317716 KPNA7A9QM74 516 aa7.77□□□□□ -1.17
CDHR3-201ENST00000317716 AP3B1O00203 1094 aa7.77□□□□□ -1.17
CDHR3-201ENST00000317716 STRNO43815 780 aa7.77□□□□□ -1.17
CDHR3-201ENST00000317716 UQCRBP14927 111 aa7.77□□□□□ -1.17
CDHR3-201ENST00000317716 IREB2P48200 963 aaKnown RBP7.77□□□□□ -1.17
CDHR3-201ENST00000317716 CUL2Q13617 745 aa7.77□□□□□ -1.17
CDHR3-201ENST00000317716 SFT2D3Q587I9 215 aa7.77□□□□□ -1.17
CDHR3-201ENST00000317716 ZBTB49Q6ZSB9 765 aa7.77□□□□□ -1.17
CDHR3-201ENST00000317716 C1orf186Q6ZWK4 172 aa7.77□□□□□ -1.17
CDHR3-201ENST00000317716 MYO1HQ8N1T3 1032 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms