RNA–Protein interactions for RNA: ENST00000315684.12

CTC1-201, Transcript of CST telomere replication complex component 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTC1, Length 7,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-201ENST00000315684 STAU1O95793 577 aaKnown RBP9.3□□□□□ -0.92
CTC1-201ENST00000315684 CSH1P0DML2 217 aa9.3□□□□□ -0.92
CTC1-201ENST00000315684 CSH2P0DML3 217 aa9.3□□□□□ -0.92
CTC1-201ENST00000315684 DDX5P17844 614 aaKnown RBP9.3□□□□□ -0.92
CTC1-201ENST00000315684 PRKAA1Q13131 559 aa9.3□□□□□ -0.92
CTC1-201ENST00000315684 OLFML2BQ68BL8 750 aa9.3□□□□□ -0.92
CTC1-201ENST00000315684 MTMR14Q8NCE2 650 aa9.3□□□□□ -0.92
CTC1-201ENST00000315684 KIAA0895Q8NCT3 520 aa9.3□□□□□ -0.92
CTC1-201ENST00000315684 DACT3Q96B18 629 aaPredicted RBP9.3□□□□□ -0.92
CTC1-201ENST00000315684 COPS7BQ9H9Q2 264 aaPredicted RBP9.3□□□□□ -0.92
CTC1-201ENST00000315684 RRAGDQ9NQL2 400 aaPredicted RBP9.3□□□□□ -0.92
CTC1-201ENST00000315684 UVRAGQ9P2Y5 699 aa9.3□□□□□ -0.92
CTC1-201ENST00000315684 IGF2BP3O00425 579 aaKnown RBP eCLIP9.3□□□□□ -0.92
CTC1-201ENST00000315684 GNRH1P01148 92 aa9.3□□□□□ -0.92
CTC1-201ENST00000315684 DNTTP04053 509 aa9.3□□□□□ -0.92
CTC1-201ENST00000315684 SETSIPP0DME0 302 aa9.3□□□□□ -0.92
CTC1-201ENST00000315684 TKTP29401 623 aaKnown RBP9.3□□□□□ -0.92
CTC1-201ENST00000315684 MAT2AP31153 395 aaKnown RBP9.3□□□□□ -0.92
CTC1-201ENST00000315684 PTPN7P35236 360 aa9.3□□□□□ -0.92
CTC1-201ENST00000315684 PHLDB3Q6NSJ2 640 aa9.3□□□□□ -0.92
CTC1-201ENST00000315684 UTP6Q9NYH9 597 aaKnown RBP9.3□□□□□ -0.92
CTC1-201ENST00000315684 MID2Q9UJV3 735 aa9.3□□□□□ -0.92
CTC1-201ENST00000315684 ALG6Q9Y672 507 aa9.3□□□□□ -0.92
CTC1-201ENST00000315684 SLIT3O75094 1523 aa9.3□□□□□ -0.92
CTC1-201ENST00000315684 SLC9A3R1O14745 358 aaPredicted RBP9.3□□□□□ -0.92
CTC1-201ENST00000315684 CSF2RAP15509 400 aa9.3□□□□□ -0.92
CTC1-201ENST00000315684 KCNA5P22460 613 aa9.3□□□□□ -0.92
CTC1-201ENST00000315684 C2orf27AQ580R0 203 aa9.3□□□□□ -0.92
CTC1-201ENST00000315684 ATG16L1Q676U5 607 aa9.3□□□□□ -0.92
CTC1-201ENST00000315684 RAET1GQ6H3X3 334 aa9.3□□□□□ -0.92
CTC1-201ENST00000315684 RETSATQ6NUM9 610 aa9.3□□□□□ -0.92
CTC1-201ENST00000315684 FUT10Q6P4F1 479 aa9.3□□□□□ -0.92
CTC1-201ENST00000315684 BRSK2Q8IWQ3 736 aa9.3□□□□□ -0.92
CTC1-201ENST00000315684 TRIM42Q8IWZ5 723 aa9.3□□□□□ -0.92
CTC1-201ENST00000315684 KLK6Q92876 244 aa9.3□□□□□ -0.92
CTC1-201ENST00000315684 SERPINB11Q96P15 392 aa9.3□□□□□ -0.92
CTC1-201ENST00000315684 CYP3A43Q9HB55 503 aa9.3□□□□□ -0.92
CTC1-201ENST00000315684 ARIH2O95376 493 aa9.3□□□□□ -0.92
CTC1-201ENST00000315684 F9P00740 461 aa9.3□□□□□ -0.92
CTC1-201ENST00000315684 YWHAZP63104 245 aaKnown RBP9.3□□□□□ -0.92
CTC1-201ENST00000315684 DAB2P98082 770 aa9.3□□□□□ -0.92
CTC1-201ENST00000315684 PFKPQ01813 784 aa9.3□□□□□ -0.92
CTC1-201ENST00000315684 WDR75Q8IWA0 830 aaKnown RBP9.3□□□□□ -0.92
CTC1-201ENST00000315684 C10orf67Q8IYJ2 551 aa9.3□□□□□ -0.92
CTC1-201ENST00000315684 CPA6Q8N4T0 437 aa9.3□□□□□ -0.92
CTC1-201ENST00000315684 ATL2Q8NHH9 583 aa9.3□□□□□ -0.92
CTC1-201ENST00000315684 HAS1Q92839 578 aa9.3□□□□□ -0.92
CTC1-201ENST00000315684 DUS2Q9NX74 493 aaKnown RBP9.3□□□□□ -0.92
CTC1-201ENST00000315684 GMEB2Q9UKD1 530 aa9.3□□□□□ -0.92
CTC1-201ENST00000315684 RBAK-RBAKDNI3L0D1 243 aa9.29□□□□□ -0.92
CTC1-201ENST00000315684 MSI1O43347 362 aaKnown RBP9.29□□□□□ -0.92
CTC1-201ENST00000315684 LTFP02788 710 aa9.29□□□□□ -0.92
CTC1-201ENST00000315684 APODP05090 189 aa9.29□□□□□ -0.92
CTC1-201ENST00000315684 C15orf59Q2T9L4 293 aaPredicted RBP9.29□□□□□ -0.92
CTC1-201ENST00000315684 KLHL38Q2WGJ6 581 aa9.29□□□□□ -0.92
CTC1-201ENST00000315684 MARC1Q5VT66 337 aa9.29□□□□□ -0.92
CTC1-201ENST00000315684 TSHZ1Q6ZSZ6 1077 aa9.29□□□□□ -0.92
CTC1-201ENST00000315684 SPATA20Q8TB22 786 aa9.29□□□□□ -0.92
CTC1-201ENST00000315684 VCX3BQ9H321 246 aa9.29□□□□□ -0.92
CTC1-201ENST00000315684 PPARGC1AQ9UBK2 798 aaKnown RBP9.29□□□□□ -0.92
CTC1-201ENST00000315684 A0A087WUV0 522 aaPredicted RBP9.29□□□□□ -0.92
CTC1-201ENST00000315684 CTPS1P17812 591 aa9.29□□□□□ -0.92
CTC1-201ENST00000315684 RASSF2P50749 326 aa9.29□□□□□ -0.92
CTC1-201ENST00000315684 CDC16Q13042 620 aa9.29□□□□□ -0.92
CTC1-201ENST00000315684 TMEM259Q4ZIN3 620 aa9.29□□□□□ -0.92
CTC1-201ENST00000315684 ERMARDQ5T6L9 678 aa9.29□□□□□ -0.92
CTC1-201ENST00000315684 TIGD7Q6NT04 549 aaPredicted RBP9.29□□□□□ -0.92
CTC1-201ENST00000315684 DENND1BQ6P3S1 775 aa9.29□□□□□ -0.92
CTC1-201ENST00000315684 CHRDL2Q6WN34 429 aa9.29□□□□□ -0.92
CTC1-201ENST00000315684 ZNF606Q8WXB4 792 aa9.29□□□□□ -0.92
CTC1-201ENST00000315684 C11orf84Q9BUA3 381 aaPredicted RBP9.29□□□□□ -0.92
CTC1-201ENST00000315684 NKX2-4Q9H2Z4 354 aa9.29□□□□□ -0.92
CTC1-201ENST00000315684 C10orf88Q9H8K7 445 aa9.29□□□□□ -0.92
CTC1-201ENST00000315684 IARS2Q9NSE4 1012 aaKnown RBP9.29□□□□□ -0.92
CTC1-201ENST00000315684 BAIAP2L1Q9UHR4 511 aa9.29□□□□□ -0.92
CTC1-201ENST00000315684 TRAF3IP3Q9Y228 551 aa9.29□□□□□ -0.92
CTC1-201ENST00000315684 H2AFYO75367 372 aaKnown RBP9.29□□□□□ -0.92
CTC1-201ENST00000315684 DARSP14868 501 aaKnown RBP9.29□□□□□ -0.92
CTC1-201ENST00000315684 TGM2P21980 687 aa9.29□□□□□ -0.92
CTC1-201ENST00000315684 ERFP50548 548 aa9.29□□□□□ -0.92
CTC1-201ENST00000315684 TTC31Q49AM3 519 aaPredicted RBP9.29□□□□□ -0.92
CTC1-201ENST00000315684 ZNF677Q86XU0 584 aa9.29□□□□□ -0.92
CTC1-201ENST00000315684 NUDCD3Q8IVD9 361 aa9.29□□□□□ -0.92
CTC1-201ENST00000315684 TMEM86AQ8N2M4 240 aa9.29□□□□□ -0.92
CTC1-201ENST00000315684 OR10G6Q8NH81 332 aa9.29□□□□□ -0.92
CTC1-201ENST00000315684 TSEN34Q9BSV6 310 aaKnown RBP9.29□□□□□ -0.92
CTC1-201ENST00000315684 CLPBQ9H078 707 aa9.29□□□□□ -0.92
CTC1-201ENST00000315684 KIAA1257Q9ULG3 409 aa9.29□□□□□ -0.92
CTC1-201ENST00000315684 A0A1W2PQH9 124 aa9.29□□□□□ -0.92
CTC1-201ENST00000315684 GOLGA8TH3BQL2 631 aa9.29□□□□□ -0.92
CTC1-201ENST00000315684 INPP4BO15327 924 aa9.29□□□□□ -0.92
CTC1-201ENST00000315684 KDM1AO60341 852 aa9.29□□□□□ -0.92
CTC1-201ENST00000315684 ONECUT3O60422 494 aaPredicted RBP9.29□□□□□ -0.92
CTC1-201ENST00000315684 ANXA9O76027 345 aa9.29□□□□□ -0.92
CTC1-201ENST00000315684 CCNE2O96020 404 aa9.29□□□□□ -0.92
CTC1-201ENST00000315684 GEMP55040 296 aa9.29□□□□□ -0.92
CTC1-201ENST00000315684 PTENP60484 403 aa9.29□□□□□ -0.92
CTC1-201ENST00000315684 NAB2Q15742 525 aa9.29□□□□□ -0.92
CTC1-201ENST00000315684 MROH9Q5TGP6 573 aa9.29□□□□□ -0.92
CTC1-201ENST00000315684 ZPBP2Q6X784 338 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms