RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 FAM43BQ6ZT52 329 aaPredicted RBP8.45□□□□□ -1.06
VPS41-202ENST00000310301 ZNF410Q86VK4 478 aa8.45□□□□□ -1.06
VPS41-202ENST00000310301 TTC30AQ86WT1 665 aa8.45□□□□□ -1.06
VPS41-202ENST00000310301 WDR60Q8WVS4 1066 aa8.45□□□□□ -1.06
VPS41-202ENST00000310301 C19orf60Q96EN9 201 aa8.45□□□□□ -1.06
VPS41-202ENST00000310301 OSBPL10Q9BXB5 764 aa8.45□□□□□ -1.06
VPS41-202ENST00000310301 APEX2Q9UBZ4 518 aa8.45□□□□□ -1.06
VPS41-202ENST00000310301 CRYBG1Q9Y4K1 1723 aa8.44□□□□□ -1.06
VPS41-202ENST00000310301 EGFRP00533 1210 aa8.44□□□□□ -1.06
VPS41-202ENST00000310301 UCHL3P15374 230 aa8.44□□□□□ -1.06
VPS41-202ENST00000310301 SELPP16109 830 aa8.44□□□□□ -1.06
VPS41-202ENST00000310301 ATP4AP20648 1035 aa8.44□□□□□ -1.06
VPS41-202ENST00000310301 ADORA2BP29275 332 aa8.44□□□□□ -1.06
VPS41-202ENST00000310301 PTPN11Q06124 597 aaPredicted RBP8.44□□□□□ -1.06
VPS41-202ENST00000310301 SLC34A1Q06495 639 aa8.44□□□□□ -1.06
VPS41-202ENST00000310301 STX5Q13190 355 aa8.44□□□□□ -1.06
VPS41-202ENST00000310301 ZCCHC7Q8N3Z6 543 aaKnown RBP8.44□□□□□ -1.06
VPS41-202ENST00000310301 SMAD5Q99717 465 aaKnown RBP8.44□□□□□ -1.06
VPS41-202ENST00000310301 TSEN34Q9BSV6 310 aaKnown RBP8.44□□□□□ -1.06
VPS41-202ENST00000310301 TMEM120AQ9BXJ8 343 aa8.44□□□□□ -1.06
VPS41-202ENST00000310301 GOLPH3Q9H4A6 298 aa8.44□□□□□ -1.06
VPS41-202ENST00000310301 RMI1Q9H9A7 625 aa8.44□□□□□ -1.06
VPS41-202ENST00000310301 RAB23Q9ULC3 237 aa8.44□□□□□ -1.06
VPS41-202ENST00000310301 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.44□□□□□ -1.06
VPS41-202ENST00000310301 A0A1W2PQJ5 194 aa8.44□□□□□ -1.06
VPS41-202ENST00000310301 TRPC5OSA6NMA1 111 aa8.44□□□□□ -1.06
VPS41-202ENST00000310301 SUPT3HB4E1H0 165 aa8.44□□□□□ -1.06
VPS41-202ENST00000310301 ZNF197O14709 1029 aa8.44□□□□□ -1.06
VPS41-202ENST00000310301 AHCYL1O43865 530 aa8.44□□□□□ -1.06
VPS41-202ENST00000310301 SV2CQ496J9 727 aa8.44□□□□□ -1.06
VPS41-202ENST00000310301 FOXR1Q6PIV2 292 aa8.44□□□□□ -1.06
VPS41-202ENST00000310301 C11orf74Q86VG3 221 aa8.44□□□□□ -1.06
VPS41-202ENST00000310301 ECSITQ9BQ95 431 aa8.44□□□□□ -1.06
VPS41-202ENST00000310301 SPRTNQ9H040 489 aaPredicted RBP8.44□□□□□ -1.06
VPS41-202ENST00000310301 EPS8L2Q9H6S3 715 aa8.44□□□□□ -1.06
VPS41-202ENST00000310301 SYTL2Q9HCH5 934 aa8.44□□□□□ -1.06
VPS41-202ENST00000310301 MOSPD1Q9UJG1 213 aa8.44□□□□□ -1.06
VPS41-202ENST00000310301 LRCH1Q9Y2L9 728 aa8.44□□□□□ -1.06
VPS41-202ENST00000310301 CLTBP09497 229 aa8.44□□□□□ -1.06
VPS41-202ENST00000310301 CCL23P55773 120 aa8.44□□□□□ -1.06
VPS41-202ENST00000310301 RBP5P82980 135 aa8.44□□□□□ -1.06
VPS41-202ENST00000310301 PWP1Q13610 501 aa8.44□□□□□ -1.06
VPS41-202ENST00000310301 PREPLQ4J6C6 727 aaPredicted RBP8.44□□□□□ -1.06
VPS41-202ENST00000310301 GDPD5Q8WTR4 605 aa8.44□□□□□ -1.06
VPS41-202ENST00000310301 ANKS1AQ92625 1134 aa8.44□□□□□ -1.06
VPS41-202ENST00000310301 ACSF2Q96CM8 615 aaPredicted RBP8.44□□□□□ -1.06
VPS41-202ENST00000310301 MCRS1Q96EZ8 462 aa8.44□□□□□ -1.06
VPS41-202ENST00000310301 GMLQ99445 158 aa8.44□□□□□ -1.06
VPS41-202ENST00000310301 SETD4Q9NVD3 440 aa8.44□□□□□ -1.06
VPS41-202ENST00000310301 TCRBV5S4A2TA0A5A2 114 aa8.44□□□□□ -1.06
VPS41-202ENST00000310301 TRIM49D1C9J1S8 452 aa8.44□□□□□ -1.06
VPS41-202ENST00000310301 SNPHO15079 494 aa8.44□□□□□ -1.06
VPS41-202ENST00000310301 SLC16A3O15427 465 aaKnown RBP8.44□□□□□ -1.06
VPS41-202ENST00000310301 TPD52L2O43399 206 aaKnown RBP8.44□□□□□ -1.06
VPS41-202ENST00000310301 LCP1P13796 627 aa8.44□□□□□ -1.06
VPS41-202ENST00000310301 SREBF1P36956 1147 aa8.44□□□□□ -1.06
VPS41-202ENST00000310301 GTF2H3Q13889 308 aa8.44□□□□□ -1.06
VPS41-202ENST00000310301 RASA2Q15283 850 aa8.44□□□□□ -1.06
VPS41-202ENST00000310301 UGP2Q16851 508 aa8.44□□□□□ -1.06
VPS41-202ENST00000310301 THEMIS2Q5TEJ8 643 aa8.44□□□□□ -1.06
VPS41-202ENST00000310301 SH3BP5LQ7L8J4 393 aa8.44□□□□□ -1.06
VPS41-202ENST00000310301 ADGRA1Q86SQ6 560 aa8.44□□□□□ -1.06
VPS41-202ENST00000310301 CLVS1Q8IUQ0 354 aaPredicted RBP8.44□□□□□ -1.06
VPS41-202ENST00000310301 GPD1LQ8N335 351 aa8.44□□□□□ -1.06
VPS41-202ENST00000310301 REPS2Q8NFH8 660 aa8.44□□□□□ -1.06
VPS41-202ENST00000310301 CAPSLQ8WWF8 208 aa8.44□□□□□ -1.06
VPS41-202ENST00000310301 ZFRQ96KR1 1074 aaKnown RBP8.44□□□□□ -1.06
VPS41-202ENST00000310301 RBBP8Q99708 897 aa8.44□□□□□ -1.06
VPS41-202ENST00000310301 FANCEQ9HB96 536 aa8.44□□□□□ -1.06
VPS41-202ENST00000310301 METTL5Q9NRN9 209 aaKnown RBP8.44□□□□□ -1.06
VPS41-202ENST00000310301 DCDC2Q9UHG0 476 aa8.44□□□□□ -1.06
VPS41-202ENST00000310301 DSEQ9UL01 958 aa8.44□□□□□ -1.06
VPS41-202ENST00000310301 C2CD2Q9Y426 696 aa8.44□□□□□ -1.06
VPS41-202ENST00000310301 ZMYM2Q9UBW7 1377 aa8.44□□□□□ -1.06
VPS41-202ENST00000310301 ASTN2O75129 1339 aaPredicted RBP8.44□□□□□ -1.06
VPS41-202ENST00000310301 ZNF862O60290 1169 aa8.44□□□□□ -1.06
VPS41-202ENST00000310301 CNTN2Q02246 1040 aa8.44□□□□□ -1.06
VPS41-202ENST00000310301 CENPCQ03188 943 aa8.44□□□□□ -1.06
VPS41-202ENST00000310301 DUOXA2Q1HG44 320 aa8.44□□□□□ -1.06
VPS41-202ENST00000310301 LDLRAD1Q5T700 205 aa8.44□□□□□ -1.06
VPS41-202ENST00000310301 ITIH5Q86UX2 942 aa8.44□□□□□ -1.06
VPS41-202ENST00000310301 SLC25A41Q8N5S1 370 aa8.44□□□□□ -1.06
VPS41-202ENST00000310301 CALML6Q8TD86 181 aa8.44□□□□□ -1.06
VPS41-202ENST00000310301 SH3KBP1Q96B97 665 aa8.44□□□□□ -1.06
VPS41-202ENST00000310301 RMDN1Q96DB5 314 aa8.44□□□□□ -1.06
VPS41-202ENST00000310301 SIK2Q9H0K1 926 aa8.44□□□□□ -1.06
VPS41-202ENST00000310301 RIOX1Q9H6W3 641 aa8.44□□□□□ -1.06
VPS41-202ENST00000310301 EFCAB1Q9HAE3 211 aa8.44□□□□□ -1.06
VPS41-202ENST00000310301 CACNA2D2Q9NY47 1150 aa8.44□□□□□ -1.06
VPS41-202ENST00000310301 ITGB1BP2Q9UKP3 347 aa8.44□□□□□ -1.06
VPS41-202ENST00000310301 UBQLN1Q9UMX0 589 aaKnown RBP8.44□□□□□ -1.06
VPS41-202ENST00000310301 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.43□□□□□ -1.06
VPS41-202ENST00000310301 C3orf70A6NLC5 250 aaPredicted RBP8.43□□□□□ -1.06
VPS41-202ENST00000310301 TDP2O95551 362 aa8.43□□□□□ -1.06
VPS41-202ENST00000310301 RFC2P35250 354 aa8.43□□□□□ -1.06
VPS41-202ENST00000310301 MFSD4BQ5TF39 518 aa8.43□□□□□ -1.06
VPS41-202ENST00000310301 LRRC74BQ6ZQY2 392 aa8.43□□□□□ -1.06
VPS41-202ENST00000310301 ZBTB49Q6ZSB9 765 aa8.43□□□□□ -1.06
VPS41-202ENST00000310301 LRP10Q7Z4F1 713 aa8.43□□□□□ -1.06
VPS41-202ENST00000310301 AMIGO3Q86WK7 504 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms