RNA–Protein interactions for RNA: ENST00000309934.4

SEC22A-201, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22A, Length 4,228 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-201ENST00000309934 LINC00523Q86TU6 105 aa6.23□□□□□ -1.41
SEC22A-201ENST00000309934 SRRM1Q8IYB3 904 aaKnown RBP6.23□□□□□ -1.41
SEC22A-201ENST00000309934 DUSP16Q9BY84 665 aa6.23□□□□□ -1.41
SEC22A-201ENST00000309934 DCLK3Q9C098 648 aa6.23□□□□□ -1.41
SEC22A-201ENST00000309934 FAM96AQ9H5X1 160 aa6.23□□□□□ -1.41
SEC22A-201ENST00000309934 METTL5Q9NRN9 209 aaKnown RBP6.23□□□□□ -1.41
SEC22A-201ENST00000309934 ABCC13Q9NSE7 274 aa6.23□□□□□ -1.41
SEC22A-201ENST00000309934 RNF186Q9NXI6 227 aa6.23□□□□□ -1.41
SEC22A-201ENST00000309934 GALNT8Q9NY28 637 aa6.23□□□□□ -1.41
SEC22A-201ENST00000309934 PHF24Q9UPV7 400 aa6.23□□□□□ -1.41
SEC22A-201ENST00000309934 URODP06132 367 aa6.22□□□□□ -1.41
SEC22A-201ENST00000309934 OR1G1P47890 313 aa6.22□□□□□ -1.41
SEC22A-201ENST00000309934 TPI1P60174 286 aa6.22□□□□□ -1.41
SEC22A-201ENST00000309934 CDK16Q00536 496 aa6.22□□□□□ -1.41
SEC22A-201ENST00000309934 AMPD2Q01433 879 aa6.22□□□□□ -1.41
SEC22A-201ENST00000309934 FAPQ12884 760 aa6.22□□□□□ -1.41
SEC22A-201ENST00000309934 MAMLD1Q13495 774 aa6.22□□□□□ -1.41
SEC22A-201ENST00000309934 TUBA3CQ13748 450 aa6.22□□□□□ -1.41
SEC22A-201ENST00000309934 MORF4L2Q15014 288 aa6.22□□□□□ -1.41
SEC22A-201ENST00000309934 BRMS1LQ5PSV4 323 aa6.22□□□□□ -1.41
SEC22A-201ENST00000309934 CST9Q5W186 159 aa6.22□□□□□ -1.41
SEC22A-201ENST00000309934 DRICH1Q6PGQ1 229 aaPredicted RBP6.22□□□□□ -1.41
SEC22A-201ENST00000309934 SPOCD1Q6ZMY3 1216 aa6.22□□□□□ -1.41
SEC22A-201ENST00000309934 MON1BQ7L1V2 547 aa6.22□□□□□ -1.41
SEC22A-201ENST00000309934 MRPL10Q7Z7H8 261 aaKnown RBP6.22□□□□□ -1.41
SEC22A-201ENST00000309934 METTL3Q86U44 580 aaKnown RBP6.22□□□□□ -1.41
SEC22A-201ENST00000309934 CACNA2D3Q8IZS8 1091 aa6.22□□□□□ -1.41
SEC22A-201ENST00000309934 C1orf127Q8N9H9 656 aa6.22□□□□□ -1.41
SEC22A-201ENST00000309934 OR5B17Q8NGF7 314 aa6.22□□□□□ -1.41
SEC22A-201ENST00000309934 KCTD13Q8WZ19 329 aa6.22□□□□□ -1.41
SEC22A-201ENST00000309934 ALKBH8Q96BT7 664 aaKnown RBP6.22□□□□□ -1.41
SEC22A-201ENST00000309934 HIC2Q96JB3 615 aa6.22□□□□□ -1.41
SEC22A-201ENST00000309934 ZNF670Q9BS34 389 aa6.22□□□□□ -1.41
SEC22A-201ENST00000309934 HTATIP2Q9BUP3 242 aa6.22□□□□□ -1.41
SEC22A-201ENST00000309934 RNF208Q9H0X6 261 aa6.22□□□□□ -1.41
SEC22A-201ENST00000309934 POPDC2Q9HBU9 364 aa6.22□□□□□ -1.41
SEC22A-201ENST00000309934 DNAAF2Q9NVR5 837 aaKnown RBP6.22□□□□□ -1.41
SEC22A-201ENST00000309934 A0A0U1RQF3 1178 aa6.22□□□□□ -1.41
SEC22A-201ENST00000309934 ERI2A8K979 691 aaKnown RBP6.22□□□□□ -1.41
SEC22A-201ENST00000309934 EPHB6O15197 1021 aa6.22□□□□□ -1.41
SEC22A-201ENST00000309934 TREHO43280 583 aa6.22□□□□□ -1.41
SEC22A-201ENST00000309934 CPP00450 1065 aa6.22□□□□□ -1.41
SEC22A-201ENST00000309934 IFNB1P01574 187 aa6.22□□□□□ -1.41
SEC22A-201ENST00000309934 GHRP10912 638 aa6.22□□□□□ -1.41
SEC22A-201ENST00000309934 ALDH1A3P47895 512 aa6.22□□□□□ -1.41
SEC22A-201ENST00000309934 YWHAZP63104 245 aaKnown RBP6.22□□□□□ -1.41
SEC22A-201ENST00000309934 DHX9Q08211 1270 aaKnown RBP6.22□□□□□ -1.41
SEC22A-201ENST00000309934 CACNB2Q08289 660 aaPredicted RBP6.22□□□□□ -1.41
SEC22A-201ENST00000309934 CBX3Q13185 183 aa6.22□□□□□ -1.41
SEC22A-201ENST00000309934 PPIGQ13427 754 aaKnown RBP eCLIP6.22□□□□□ -1.41
SEC22A-201ENST00000309934 NAB1Q13506 487 aa6.22□□□□□ -1.41
SEC22A-201ENST00000309934 SLC10A6Q3KNW5 377 aa6.22□□□□□ -1.41
SEC22A-201ENST00000309934 PABPC1LQ4VXU2 614 aaKnown RBP6.22□□□□□ -1.41
SEC22A-201ENST00000309934 PRAMEF19Q5SWL8 479 aa6.22□□□□□ -1.41
SEC22A-201ENST00000309934 DDX42Q86XP3 938 aaKnown RBP eCLIP6.22□□□□□ -1.41
SEC22A-201ENST00000309934 JAMLQ86YT9 394 aa6.22□□□□□ -1.41
SEC22A-201ENST00000309934 LINC01465Q8N7H1 131 aa6.22□□□□□ -1.41
SEC22A-201ENST00000309934 C12orf50Q8NA57 414 aaPredicted RBP6.22□□□□□ -1.41
SEC22A-201ENST00000309934 HSPH1Q92598 858 aa6.22□□□□□ -1.41
SEC22A-201ENST00000309934 SEMA4DQ92854 862 aa6.22□□□□□ -1.41
SEC22A-201ENST00000309934 ATP6V1E2Q96A05 226 aa6.22□□□□□ -1.41
SEC22A-201ENST00000309934 SRPK1Q96SB4 655 aaKnown RBP6.22□□□□□ -1.41
SEC22A-201ENST00000309934 OSBPL1AQ9BXW6 950 aa6.22□□□□□ -1.41
SEC22A-201ENST00000309934 LRRC19Q9H756 370 aa6.22□□□□□ -1.41
SEC22A-201ENST00000309934 PCDH9Q9HC56 1237 aa6.22□□□□□ -1.41
SEC22A-201ENST00000309934 ABCB6Q9NP58 842 aa6.22□□□□□ -1.41
SEC22A-201ENST00000309934 TLR8Q9NR97 1041 aaKnown RBP6.22□□□□□ -1.41
SEC22A-201ENST00000309934 ZNF446Q9NWS9 450 aa6.22□□□□□ -1.41
SEC22A-201ENST00000309934 GJD2Q9UKL4 321 aa6.22□□□□□ -1.41
SEC22A-201ENST00000309934 HPCAL4Q9UM19 191 aa6.22□□□□□ -1.41
SEC22A-201ENST00000309934 SHOC2Q9UQ13 582 aa6.22□□□□□ -1.41
SEC22A-201ENST00000309934 PCDHGA4Q9Y5G9 962 aa6.22□□□□□ -1.41
SEC22A-201ENST00000309934 ADGRA3Q8IWK6 1321 aa6.22□□□□□ -1.41
SEC22A-201ENST00000309934 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.22□□□□□ -1.41
SEC22A-201ENST00000309934 ABHD14A-ACY1A0A1B0GW23 586 aa6.22□□□□□ -1.41
SEC22A-201ENST00000309934 GOLGA8TH3BQL2 631 aa6.22□□□□□ -1.41
SEC22A-201ENST00000309934 PGK1P00558 417 aa6.22□□□□□ -1.41
SEC22A-201ENST00000309934 H2AFXP16104 143 aaPredicted RBP6.22□□□□□ -1.41
SEC22A-201ENST00000309934 SERPINB9P50453 376 aa6.22□□□□□ -1.41
SEC22A-201ENST00000309934 ZNF132P52740 706 aa6.22□□□□□ -1.41
SEC22A-201ENST00000309934 PMS2P54278 862 aa6.22□□□□□ -1.41
SEC22A-201ENST00000309934 GEMIN4P57678 1058 aaKnown RBP6.22□□□□□ -1.41
SEC22A-201ENST00000309934 EIF3EP60228 445 aaKnown RBP6.22□□□□□ -1.41
SEC22A-201ENST00000309934 CTXN3Q4LDR2 81 aa6.22□□□□□ -1.41
SEC22A-201ENST00000309934 ARHGAP15Q53QZ3 475 aa6.22□□□□□ -1.41
SEC22A-201ENST00000309934 ERMARDQ5T6L9 678 aa6.22□□□□□ -1.41
SEC22A-201ENST00000309934 FYB2Q5VWT5 728 aa6.22□□□□□ -1.41
SEC22A-201ENST00000309934 CCDC149Q6ZUS6 474 aa6.22□□□□□ -1.41
SEC22A-201ENST00000309934 NECAB2Q7Z6G3 386 aa6.22□□□□□ -1.41
SEC22A-201ENST00000309934 ACOT1Q86TX2 421 aa6.22□□□□□ -1.41
SEC22A-201ENST00000309934 PPIL6Q8IXY8 311 aa6.22□□□□□ -1.41
SEC22A-201ENST00000309934 B3GALNT2Q8NCR0 500 aa6.22□□□□□ -1.41
SEC22A-201ENST00000309934 LMO3Q8TAP4 145 aa6.22□□□□□ -1.41
SEC22A-201ENST00000309934 LZICQ8WZA0 190 aa6.22□□□□□ -1.41
SEC22A-201ENST00000309934 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.22□□□□□ -1.41
SEC22A-201ENST00000309934 LRRC39Q96DD0 335 aa6.22□□□□□ -1.41
SEC22A-201ENST00000309934 ABHD8Q96I13 439 aa6.22□□□□□ -1.41
SEC22A-201ENST00000309934 GORASP1Q9BQQ3 440 aa6.22□□□□□ -1.41
SEC22A-201ENST00000309934 CCSER2Q9H7U1 834 aa6.22□□□□□ -1.41
SEC22A-201ENST00000309934 VPS37BQ9H9H4 285 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms