RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 DENND5BQ6ZUT9 1274 aa13.11□□□□□ -0.31
RETREG3-201ENST00000309428 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.11□□□□□ -0.31
RETREG3-201ENST00000309428 CLEC4CQ8WTT0 213 aa13.11□□□□□ -0.31
RETREG3-201ENST00000309428 WDR60Q8WVS4 1066 aa13.11□□□□□ -0.31
RETREG3-201ENST00000309428 ERLEC1Q96DZ1 483 aa13.11□□□□□ -0.31
RETREG3-201ENST00000309428 SLITRK1Q96PX8 696 aa13.11□□□□□ -0.31
RETREG3-201ENST00000309428 MPHOSPH6Q99547 160 aaKnown RBP13.11□□□□□ -0.31
RETREG3-201ENST00000309428 NDNQ99608 321 aa13.11□□□□□ -0.31
RETREG3-201ENST00000309428 FERMT1Q9BQL6 677 aa13.11□□□□□ -0.31
RETREG3-201ENST00000309428 TRPV6Q9H1D0 765 aa13.11□□□□□ -0.31
RETREG3-201ENST00000309428 NUDT5Q9UKK9 219 aa13.11□□□□□ -0.31
RETREG3-201ENST00000309428 STARD13Q9Y3M8 1113 aa13.11□□□□□ -0.31
RETREG3-201ENST00000309428 GSC2O15499 205 aa13.11□□□□□ -0.31
RETREG3-201ENST00000309428 ERBB2P04626 1255 aa13.11□□□□□ -0.31
RETREG3-201ENST00000309428 CCDC130P13994 396 aa13.11□□□□□ -0.31
RETREG3-201ENST00000309428 TYK2P29597 1187 aa13.11□□□□□ -0.31
RETREG3-201ENST00000309428 TFDP3Q5H9I0 405 aa13.11□□□□□ -0.31
RETREG3-201ENST00000309428 FOXR2Q6PJQ5 311 aa13.11□□□□□ -0.31
RETREG3-201ENST00000309428 METTL7BQ6UX53 244 aa13.11□□□□□ -0.31
RETREG3-201ENST00000309428 ENOSF1Q7L5Y1 443 aa13.11□□□□□ -0.31
RETREG3-201ENST00000309428 USP33Q8TEY7 942 aa13.11□□□□□ -0.31
RETREG3-201ENST00000309428 USP13Q92995 863 aaPredicted RBP13.11□□□□□ -0.31
RETREG3-201ENST00000309428 STRA6Q9BX79 667 aa13.11□□□□□ -0.31
RETREG3-201ENST00000309428 TSPAN16Q9UKR8 245 aa13.11□□□□□ -0.31
RETREG3-201ENST00000309428 KBTBD13C9JR72 458 aa13.11□□□□□ -0.31
RETREG3-201ENST00000309428 CYB561D2O14569 222 aa13.11□□□□□ -0.31
RETREG3-201ENST00000309428 SLC26A4O43511 780 aa13.11□□□□□ -0.31
RETREG3-201ENST00000309428 EEF1B2P24534 225 aaKnown RBP13.11□□□□□ -0.31
RETREG3-201ENST00000309428 SERPINB5P36952 375 aa13.11□□□□□ -0.31
RETREG3-201ENST00000309428 TMEM132DQ14C87 1099 aa13.11□□□□□ -0.31
RETREG3-201ENST00000309428 FKBP1CQ5VVH2 108 aa13.11□□□□□ -0.31
RETREG3-201ENST00000309428 SYDE1Q6ZW31 735 aaPredicted RBP13.11□□□□□ -0.31
RETREG3-201ENST00000309428 DEFB107AQ8IZN7 70 aa13.11□□□□□ -0.31
RETREG3-201ENST00000309428 OLFM3Q96PB7 478 aa13.11□□□□□ -0.31
RETREG3-201ENST00000309428 GRIP2Q9C0E4 1043 aa13.11□□□□□ -0.31
RETREG3-201ENST00000309428 CAAP1Q9H8G2 361 aa13.11□□□□□ -0.31
RETREG3-201ENST00000309428 DNALI1O14645 258 aaPredicted RBP13.1□□□□□ -0.31
RETREG3-201ENST00000309428 SETSIPP0DME0 302 aa13.1□□□□□ -0.31
RETREG3-201ENST00000309428 CASP2P42575 452 aa13.1□□□□□ -0.31
RETREG3-201ENST00000309428 RPS6KA3P51812 740 aa13.1□□□□□ -0.31
RETREG3-201ENST00000309428 MAPK10P53779 464 aa13.1□□□□□ -0.31
RETREG3-201ENST00000309428 ROR1Q01973 937 aa13.1□□□□□ -0.31
RETREG3-201ENST00000309428 TTLL4Q14679 1199 aa13.1□□□□□ -0.31
RETREG3-201ENST00000309428 NIPA1Q7RTP0 329 aa13.1□□□□□ -0.31
RETREG3-201ENST00000309428 BRSK2Q8IWQ3 736 aa13.1□□□□□ -0.31
RETREG3-201ENST00000309428 TRIM42Q8IWZ5 723 aa13.1□□□□□ -0.31
RETREG3-201ENST00000309428 RCOR2Q8IZ40 523 aa13.1□□□□□ -0.31
RETREG3-201ENST00000309428 LRRC19Q9H756 370 aa13.1□□□□□ -0.31
RETREG3-201ENST00000309428 USP18Q9UMW8 372 aa13.1□□□□□ -0.31
RETREG3-201ENST00000309428 DNAJC16Q9Y2G8 782 aa13.1□□□□□ -0.31
RETREG3-201ENST00000309428 ARFGEF1Q9Y6D6 1849 aa13.1□□□□□ -0.31
RETREG3-201ENST00000309428 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.1□□□□□ -0.31
RETREG3-201ENST00000309428 MICAL2O94851 1124 aa13.1□□□□□ -0.31
RETREG3-201ENST00000309428 IQCF3P0C7M6 154 aa13.1□□□□□ -0.31
RETREG3-201ENST00000309428 CENPCQ03188 943 aa13.1□□□□□ -0.31
RETREG3-201ENST00000309428 PTPN11Q06124 597 aaPredicted RBP13.1□□□□□ -0.31
RETREG3-201ENST00000309428 MGAT5Q09328 741 aa13.1□□□□□ -0.31
RETREG3-201ENST00000309428 AP1B1Q10567 949 aa13.1□□□□□ -0.31
RETREG3-201ENST00000309428 PTK6Q13882 451 aa13.1□□□□□ -0.31
RETREG3-201ENST00000309428 ANO4Q32M45 955 aa13.1□□□□□ -0.31
RETREG3-201ENST00000309428 MSS51Q4VC12 460 aa13.1□□□□□ -0.31
RETREG3-201ENST00000309428 FNBP1LQ5T0N5 605 aa13.1□□□□□ -0.31
RETREG3-201ENST00000309428 RINLQ6ZS11 566 aa13.1□□□□□ -0.31
RETREG3-201ENST00000309428 PTAR1Q7Z6K3 402 aaPredicted RBP13.1□□□□□ -0.31
RETREG3-201ENST00000309428 CDKL2Q92772 493 aa13.1□□□□□ -0.31
RETREG3-201ENST00000309428 ACO2Q99798 780 aaKnown RBP13.1□□□□□ -0.31
RETREG3-201ENST00000309428 SIK2Q9H0K1 926 aa13.1□□□□□ -0.31
RETREG3-201ENST00000309428 DHX33Q9H6R0 707 aaKnown RBP13.1□□□□□ -0.31
RETREG3-201ENST00000309428 SUDS3Q9H7L9 328 aaPredicted RBP13.1□□□□□ -0.31
RETREG3-201ENST00000309428 A6NJR5 290 aa13.1□□□□□ -0.31
RETREG3-201ENST00000309428 ZBBXA8MT70 800 aa13.1□□□□□ -0.31
RETREG3-201ENST00000309428 LIASO43766 372 aa13.1□□□□□ -0.31
RETREG3-201ENST00000309428 FAM200BP0CF97 657 aa13.1□□□□□ -0.31
RETREG3-201ENST00000309428 BEX3Q00994 111 aa13.1□□□□□ -0.31
RETREG3-201ENST00000309428 OLIG2Q13516 323 aa13.1□□□□□ -0.31
RETREG3-201ENST00000309428 SIX1Q15475 284 aaPredicted RBP13.1□□□□□ -0.31
RETREG3-201ENST00000309428 SLC45A4Q5BKX6 768 aa13.1□□□□□ -0.31
RETREG3-201ENST00000309428 MAP3K21Q5TCX8 1036 aa13.1□□□□□ -0.31
RETREG3-201ENST00000309428 MFSD5Q6N075 450 aa13.1□□□□□ -0.31
RETREG3-201ENST00000309428 MPZL3Q6UWV2 235 aa13.1□□□□□ -0.31
RETREG3-201ENST00000309428 C1orf127Q8N9H9 656 aa13.1□□□□□ -0.31
RETREG3-201ENST00000309428 CXorf38Q8TB03 319 aa13.1□□□□□ -0.31
RETREG3-201ENST00000309428 SH3TC2Q8TF17 1288 aa13.1□□□□□ -0.31
RETREG3-201ENST00000309428 INPP5DQ92835 1189 aa13.1□□□□□ -0.31
RETREG3-201ENST00000309428 PRR11Q96HE9 360 aaPredicted RBP13.1□□□□□ -0.31
RETREG3-201ENST00000309428 GORASP1Q9BQQ3 440 aa13.1□□□□□ -0.31
RETREG3-201ENST00000309428 DCUN1D5Q9BTE7 237 aa13.1□□□□□ -0.31
RETREG3-201ENST00000309428 MAN1C1Q9NR34 630 aa13.1□□□□□ -0.31
RETREG3-201ENST00000309428 CYTH4Q9UIA0 394 aa13.1□□□□□ -0.31
RETREG3-201ENST00000309428 SNCAIPQ9Y6H5 919 aa13.1□□□□□ -0.31
RETREG3-201ENST00000309428 MAST2Q6P0Q8 1798 aa13.1□□□□□ -0.31
RETREG3-201ENST00000309428 GPC4O75487 556 aa13.09□□□□□ -0.31
RETREG3-201ENST00000309428 ASS1P00966 412 aaKnown RBP13.09□□□□□ -0.31
RETREG3-201ENST00000309428 HMGCRP04035 888 aa13.09□□□□□ -0.31
RETREG3-201ENST00000309428 CYP2B6P20813 491 aa13.09□□□□□ -0.31
RETREG3-201ENST00000309428 MUTP22033 750 aa13.09□□□□□ -0.31
RETREG3-201ENST00000309428 SDC4P31431 198 aa13.09□□□□□ -0.31
RETREG3-201ENST00000309428 PGGT1BP53609 377 aa13.09□□□□□ -0.31
RETREG3-201ENST00000309428 NFIL3Q16649 462 aa13.09□□□□□ -0.31
RETREG3-201ENST00000309428 TWF2Q6IBS0 349 aaKnown RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms