RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 TMEM245Q9H330 911 aa14.34□□□□□ -0.11
PRKCB-201ENST00000303531 AP4S1Q9Y587 144 aa14.34□□□□□ -0.11
PRKCB-201ENST00000303531 NWD1Q149M9 1564 aa14.34□□□□□ -0.11
PRKCB-201ENST00000303531 ENDOD1O94919 500 aa14.34□□□□□ -0.11
PRKCB-201ENST00000303531 VIL1P09327 827 aaKnown RBP14.34□□□□□ -0.11
PRKCB-201ENST00000303531 GCLCP48506 637 aaPredicted RBP14.34□□□□□ -0.11
PRKCB-201ENST00000303531 NT5DC3Q86UY8 548 aa14.34□□□□□ -0.11
PRKCB-201ENST00000303531 PDGFCQ9NRA1 345 aa14.34□□□□□ -0.11
PRKCB-201ENST00000303531 TSPAN16Q9UKR8 245 aa14.34□□□□□ -0.11
PRKCB-201ENST00000303531 PCDHA3Q9Y5H8 950 aa14.34□□□□□ -0.11
PRKCB-201ENST00000303531 CELF2O95319 508 aaKnown RBP14.33□□□□□ -0.11
PRKCB-201ENST00000303531 IL1R1P14778 569 aa14.33□□□□□ -0.11
PRKCB-201ENST00000303531 ALOX15P16050 662 aaPredicted RBP14.33□□□□□ -0.11
PRKCB-201ENST00000303531 SLC26A2P50443 739 aa14.33□□□□□ -0.11
PRKCB-201ENST00000303531 ATP6AP1LQ52LC2 224 aa14.33□□□□□ -0.11
PRKCB-201ENST00000303531 RIN3Q8TB24 985 aa14.33□□□□□ -0.11
PRKCB-201ENST00000303531 LRRC4BQ9NT99 713 aa14.33□□□□□ -0.11
PRKCB-201ENST00000303531 ITGA11Q9UKX5 1188 aa14.33□□□□□ -0.11
PRKCB-201ENST00000303531 GSNP06396 782 aa14.33□□□□□ -0.11
PRKCB-201ENST00000303531 THP07101 528 aa14.33□□□□□ -0.11
PRKCB-201ENST00000303531 N4BP2L1Q5TBK1 243 aaPredicted RBP14.33□□□□□ -0.11
PRKCB-201ENST00000303531 METTL7BQ6UX53 244 aa14.33□□□□□ -0.11
PRKCB-201ENST00000303531 LRRC8DQ7L1W4 858 aa14.33□□□□□ -0.11
PRKCB-201ENST00000303531 RNF180Q86T96 592 aa14.33□□□□□ -0.11
PRKCB-201ENST00000303531 TCP10LQ8TDR4 215 aa14.33□□□□□ -0.11
PRKCB-201ENST00000303531 AENQ8WTP8 325 aaKnown RBP14.33□□□□□ -0.11
PRKCB-201ENST00000303531 TFRCP02786 760 aaKnown RBP14.33□□□□□ -0.12
PRKCB-201ENST00000303531 LHX1P48742 406 aa14.33□□□□□ -0.12
PRKCB-201ENST00000303531 ARL4DP49703 201 aa14.33□□□□□ -0.12
PRKCB-201ENST00000303531 TBL3Q12788 808 aaKnown RBP14.33□□□□□ -0.12
PRKCB-201ENST00000303531 C3orf67Q6ZVT6 689 aa14.33□□□□□ -0.12
PRKCB-201ENST00000303531 APBB2Q92870 758 aa14.33□□□□□ -0.12
PRKCB-201ENST00000303531 MROH8Q9H579 483 aa14.33□□□□□ -0.12
PRKCB-201ENST00000303531 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.33□□□□□ -0.12
PRKCB-201ENST00000303531 GLP2RO95838 553 aa14.33□□□□□ -0.12
PRKCB-201ENST00000303531 FBXO47Q5MNV8 452 aa14.33□□□□□ -0.12
PRKCB-201ENST00000303531 OTOP1Q7RTM1 612 aa14.33□□□□□ -0.12
PRKCB-201ENST00000303531 PTAR1Q7Z6K3 402 aaPredicted RBP14.33□□□□□ -0.12
PRKCB-201ENST00000303531 DEFB107AQ8IZN7 70 aa14.33□□□□□ -0.12
PRKCB-201ENST00000303531 CARNMT1Q8N4J0 409 aa14.33□□□□□ -0.12
PRKCB-201ENST00000303531 CLPBQ9H078 707 aa14.33□□□□□ -0.12
PRKCB-201ENST00000303531 IL1RAPL1Q9NZN1 696 aa14.33□□□□□ -0.12
PRKCB-201ENST00000303531 PLA2G6O60733 806 aa14.33□□□□□ -0.12
PRKCB-201ENST00000303531 IFI35P80217 286 aaPredicted RBP14.33□□□□□ -0.12
PRKCB-201ENST00000303531 SKIV2LQ15477 1246 aaKnown RBP14.33□□□□□ -0.12
PRKCB-201ENST00000303531 GDF3Q9NR23 364 aa14.33□□□□□ -0.12
PRKCB-201ENST00000303531 NINJ2Q9NZG7 142 aa14.33□□□□□ -0.12
PRKCB-201ENST00000303531 MPP6Q9NZW5 540 aa14.33□□□□□ -0.12
PRKCB-201ENST00000303531 PAIP2BQ9ULR5 123 aaKnown RBP14.33□□□□□ -0.12
PRKCB-201ENST00000303531 BARX2Q9UMQ3 279 aaPredicted RBP14.33□□□□□ -0.12
PRKCB-201ENST00000303531 CRTAMO95727 393 aa14.33□□□□□ -0.12
PRKCB-201ENST00000303531 ZNF286BP0CG31 522 aa14.33□□□□□ -0.12
PRKCB-201ENST00000303531 GHRP10912 638 aa14.33□□□□□ -0.12
PRKCB-201ENST00000303531 MBL2P11226 248 aaPredicted RBP14.33□□□□□ -0.12
PRKCB-201ENST00000303531 PECAM1P16284 738 aaPredicted RBP14.33□□□□□ -0.12
PRKCB-201ENST00000303531 GTF2A2P52657 109 aa14.33□□□□□ -0.12
PRKCB-201ENST00000303531 PPP2R3CQ969Q6 453 aa14.33□□□□□ -0.12
PRKCB-201ENST00000303531 DOLKQ9UPQ8 538 aa14.33□□□□□ -0.12
PRKCB-201ENST00000303531 H7C4K7 107 aa14.32□□□□□ -0.12
PRKCB-201ENST00000303531 SLC1A6P48664 564 aa14.32□□□□□ -0.12
PRKCB-201ENST00000303531 NDST1P52848 882 aa14.32□□□□□ -0.12
PRKCB-201ENST00000303531 TP53BP2Q13625 1128 aa14.32□□□□□ -0.12
PRKCB-201ENST00000303531 PGS1Q32NB8 556 aa14.32□□□□□ -0.12
PRKCB-201ENST00000303531 APLFQ8IW19 511 aaPredicted RBP14.32□□□□□ -0.12
PRKCB-201ENST00000303531 KANSL1LA0AUZ9 987 aa14.32□□□□□ -0.12
PRKCB-201ENST00000303531 JADE3Q92613 823 aa14.32□□□□□ -0.12
PRKCB-201ENST00000303531 FKBP6O75344 327 aa14.32□□□□□ -0.12
PRKCB-201ENST00000303531 SASH3O75995 380 aa14.32□□□□□ -0.12
PRKCB-201ENST00000303531 ATP6V1B2P21281 511 aa14.32□□□□□ -0.12
PRKCB-201ENST00000303531 SSTR1P30872 391 aa14.32□□□□□ -0.12
PRKCB-201ENST00000303531 TMED10P49755 219 aaKnown RBP14.32□□□□□ -0.12
PRKCB-201ENST00000303531 POU6F1Q14863 301 aa14.32□□□□□ -0.12
PRKCB-201ENST00000303531 AGKQ53H12 422 aa14.32□□□□□ -0.12
PRKCB-201ENST00000303531 ARHGAP15Q53QZ3 475 aa14.32□□□□□ -0.12
PRKCB-201ENST00000303531 OSMRQ99650 979 aa14.32□□□□□ -0.12
PRKCB-201ENST00000303531 NMRK1Q9NWW6 199 aa14.32□□□□□ -0.12
PRKCB-201ENST00000303531 SLC12A8A0AV02 714 aa14.32□□□□□ -0.12
PRKCB-201ENST00000303531 WDR27A2RRH5 827 aa14.32□□□□□ -0.12
PRKCB-201ENST00000303531 GCNT1Q02742 428 aa14.32□□□□□ -0.12
PRKCB-201ENST00000303531 CDC16Q13042 620 aa14.32□□□□□ -0.12
PRKCB-201ENST00000303531 OASLQ15646 514 aaKnown RBP14.32□□□□□ -0.12
PRKCB-201ENST00000303531 PLEKHH3Q7Z736 793 aa14.32□□□□□ -0.12
PRKCB-201ENST00000303531 SYTL2Q9HCH5 934 aa14.32□□□□□ -0.12
PRKCB-201ENST00000303531 BLOC1S4Q9NUP1 217 aa14.32□□□□□ -0.12
PRKCB-201ENST00000303531 SALL1Q9NSC2 1324 aa14.32□□□□□ -0.12
PRKCB-201ENST00000303531 TMEM150BA6NC51 233 aa14.32□□□□□ -0.12
PRKCB-201ENST00000303531 MT-CO1P00395 513 aa14.32□□□□□ -0.12
PRKCB-201ENST00000303531 MAPK1P28482 360 aa14.32□□□□□ -0.12
PRKCB-201ENST00000303531 CRYMQ14894 314 aa14.32□□□□□ -0.12
PRKCB-201ENST00000303531 TRMT5Q32P41 509 aaKnown RBP14.32□□□□□ -0.12
PRKCB-201ENST00000303531 CELF6Q96J87 481 aaKnown RBP14.32□□□□□ -0.12
PRKCB-201ENST00000303531 SYNDIG1Q9H7V2 258 aa14.32□□□□□ -0.12
PRKCB-201ENST00000303531 SNTG2Q9NY99 539 aa14.32□□□□□ -0.12
PRKCB-201ENST00000303531 UBDO15205 165 aa14.32□□□□□ -0.12
PRKCB-201ENST00000303531 NCAM2O15394 837 aa14.32□□□□□ -0.12
PRKCB-201ENST00000303531 MPOP05164 745 aa14.32□□□□□ -0.12
PRKCB-201ENST00000303531 PPATQ06203 517 aa14.32□□□□□ -0.12
PRKCB-201ENST00000303531 LY6KQ17RY6 165 aa14.32□□□□□ -0.12
PRKCB-201ENST00000303531 CTXN3Q4LDR2 81 aa14.32□□□□□ -0.12
PRKCB-201ENST00000303531 CREG2Q8IUH2 290 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms